RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 KIAA0556O60303 1618 aa21.52■■□□□ 1.04
VSX2-201ENST00000261980 SPATA31E1Q6ZUB1 1445 aa21.52■■□□□ 1.03
VSX2-201ENST00000261980 CARD11Q9BXL7 1154 aa21.51■■□□□ 1.03
VSX2-201ENST00000261980 MYOM3Q5VTT5 1437 aa21.51■■□□□ 1.03
VSX2-201ENST00000261980 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
VSX2-201ENST00000261980 PNNQ9H307 717 aaKnown RBP21.49■■□□□ 1.03
VSX2-201ENST00000261980 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
VSX2-201ENST00000261980 MYBBP1AQ9BQG0 1328 aaKnown RBP21.47■■□□□ 1.03
VSX2-201ENST00000261980 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
VSX2-201ENST00000261980 SEC24BO95487 1268 aa21.46■■□□□ 1.03
VSX2-201ENST00000261980 ZNF644Q9H582 1327 aaPredicted RBP21.46■■□□□ 1.03
VSX2-201ENST00000261980 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
VSX2-201ENST00000261980 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.02
VSX2-201ENST00000261980 ANKRD30BQ9BXX2 1392 aa21.45■■□□□ 1.02
VSX2-201ENST00000261980 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
VSX2-201ENST00000261980 HSP90AA1P07900 732 aaKnown RBP21.45■■□□□ 1.02
VSX2-201ENST00000261980 HECW1Q76N89 1606 aa21.43■■□□□ 1.02
VSX2-201ENST00000261980 ERCC6L2Q5T890 1561 aa21.43■■□□□ 1.02
VSX2-201ENST00000261980 PLEKHG5O94827 1062 aa21.42■■□□□ 1.02
VSX2-201ENST00000261980 PRG4Q92954 1404 aaPredicted RBP21.41■■□□□ 1.02
VSX2-201ENST00000261980 KTN1Q86UP2 1357 aaKnown RBP21.4■■□□□ 1.02
VSX2-201ENST00000261980 XRCC6P12956 609 aaKnown RBP eCLIP21.39■■□□□ 1.02
VSX2-201ENST00000261980 LRPPRCP42704 1394 aaKnown RBP21.39■■□□□ 1.02
VSX2-201ENST00000261980 KIF15Q9NS87 1388 aa21.39■■□□□ 1.02
VSX2-201ENST00000261980 NUP153P49790 1475 aaKnown RBP21.39■■□□□ 1.01
VSX2-201ENST00000261980 CENPQQ7L2Z9 268 aaPredicted RBP21.38■■□□□ 1.01
VSX2-201ENST00000261980 KDM2BQ8NHM5 1336 aa21.37■■□□□ 1.01
VSX2-201ENST00000261980 NLRP13Q86W25 1043 aa21.37■■□□□ 1.01
VSX2-201ENST00000261980 RPRD2Q5VT52 1461 aaKnown RBP21.36■■□□□ 1.01
VSX2-201ENST00000261980 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
VSX2-201ENST00000261980 EHBP1L1Q8N3D4 1523 aa21.35■■□□□ 1.01
VSX2-201ENST00000261980 PKD2Q13563 968 aa21.35■■□□□ 1.01
VSX2-201ENST00000261980 ARID3AQ99856 593 aa21.35■■□□□ 1.01
VSX2-201ENST00000261980 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
VSX2-201ENST00000261980 BRD4O60885 1362 aaPredicted RBP21.34■■□□□ 1.01
VSX2-201ENST00000261980 RAPGEF6Q8TEU7 1601 aa21.34■■□□□ 1.01
VSX2-201ENST00000261980 RALBP1Q15311 655 aa21.34■■□□□ 1.01
VSX2-201ENST00000261980 BCORL1Q5H9F3 1711 aa21.34■■□□□ 1.01
VSX2-201ENST00000261980 PDE3BQ13370 1112 aa21.33■■□□□ 1.01
VSX2-201ENST00000261980 GOLGA6L3A6NEY3 463 aa21.33■■□□□ 1
VSX2-201ENST00000261980 SUPT6HQ7KZ85 1726 aaKnown RBP21.33■■□□□ 1
VSX2-201ENST00000261980 L1TD1Q5T7N2 865 aaKnown RBP21.31■■□□□ 1
VSX2-201ENST00000261980 PTPRGP23470 1445 aa21.31■■□□□ 1
VSX2-201ENST00000261980 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
VSX2-201ENST00000261980 IGHDP01880 384 aa21.28■■□□□ 1
VSX2-201ENST00000261980 BCAR3O75815 825 aa21.27■■□□□ 1
VSX2-201ENST00000261980 CCDC146Q8IYE0 955 aa21.27■■□□□ 1
VSX2-201ENST00000261980 RGL3Q3MIN7 710 aa21.27■□□□□ 0.99
VSX2-201ENST00000261980 PODXL2Q9NZ53 605 aa21.27■□□□□ 0.99
VSX2-201ENST00000261980 USP19O94966 1318 aa21.26■□□□□ 0.99
VSX2-201ENST00000261980 MIA2Q96PC5 1412 aa21.26■□□□□ 0.99
VSX2-201ENST00000261980 A0A0U1RQG5 324 aaPredicted RBP21.25■□□□□ 0.99
VSX2-201ENST00000261980 BECN1Q14457 450 aa21.24■□□□□ 0.99
VSX2-201ENST00000261980 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
VSX2-201ENST00000261980 RRP9O43818 475 aaKnown RBP21.23■□□□□ 0.99
VSX2-201ENST00000261980 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
VSX2-201ENST00000261980 CLCN1P35523 988 aa21.21■□□□□ 0.99
VSX2-201ENST00000261980 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
VSX2-201ENST00000261980 PANK3Q9H999 370 aa21.2■□□□□ 0.98
VSX2-201ENST00000261980 DUSP27Q5VZP5 1158 aa21.19■□□□□ 0.98
VSX2-201ENST00000261980 RBM10P98175 930 aaKnown RBP21.19■□□□□ 0.98
VSX2-201ENST00000261980 CANXP27824 592 aaKnown RBP21.18■□□□□ 0.98
VSX2-201ENST00000261980 TBC1D2Q9BYX2 928 aa21.18■□□□□ 0.98
VSX2-201ENST00000261980 SPINK5Q9NQ38 1064 aaPredicted RBP21.18■□□□□ 0.98
VSX2-201ENST00000261980 COG6Q9Y2V7 657 aa21.18■□□□□ 0.98
VSX2-201ENST00000261980 ATP10BO94823 1461 aa21.18■□□□□ 0.98
VSX2-201ENST00000261980 NBPF1Q3BBV0 1214 aa21.18■□□□□ 0.98
VSX2-201ENST00000261980 TROQ12816 1431 aaPredicted RBP21.17■□□□□ 0.98
VSX2-201ENST00000261980 ROCK2O75116 1388 aaKnown RBP21.17■□□□□ 0.98
VSX2-201ENST00000261980 PANK1Q8TE04 598 aa21.17■□□□□ 0.98
VSX2-201ENST00000261980 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
VSX2-201ENST00000261980 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
VSX2-201ENST00000261980 WDR43Q15061 677 aaKnown RBP eCLIP21.16■□□□□ 0.98
VSX2-201ENST00000261980 MYH16Q9H6N6 1097 aa21.16■□□□□ 0.98
VSX2-201ENST00000261980 PLEKHH1Q9ULM0 1364 aa21.16■□□□□ 0.98
VSX2-201ENST00000261980 ABCA8O94911 1581 aa21.16■□□□□ 0.98
VSX2-201ENST00000261980 ESPNB1AK53 854 aa21.14■□□□□ 0.97
VSX2-201ENST00000261980 TRAK2O60296 914 aa21.14■□□□□ 0.97
VSX2-201ENST00000261980 MCM4P33991 863 aa21.14■□□□□ 0.97
VSX2-201ENST00000261980 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.14■□□□□ 0.97
VSX2-201ENST00000261980 ANTXR1Q9H6X2 564 aa21.14■□□□□ 0.97
VSX2-201ENST00000261980 TRIM44Q96DX7 344 aaPredicted RBP21.13■□□□□ 0.97
VSX2-201ENST00000261980 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
VSX2-201ENST00000261980 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
VSX2-201ENST00000261980 KIF14Q15058 1648 aa21.12■□□□□ 0.97
VSX2-201ENST00000261980 PER1O15534 1290 aaPredicted RBP21.12■□□□□ 0.97
VSX2-201ENST00000261980 BCL2L13Q9BXK5 485 aa21.1■□□□□ 0.97
VSX2-201ENST00000261980 UPF2Q9HAU5 1272 aaKnown RBP21.1■□□□□ 0.97
VSX2-201ENST00000261980 NEUROD2Q15784 382 aa21.09■□□□□ 0.97
VSX2-201ENST00000261980 ZBTB7CA1YPR0 619 aa21.09■□□□□ 0.97
VSX2-201ENST00000261980 FOXD4L1Q9NU39 408 aa21.09■□□□□ 0.97
VSX2-201ENST00000261980 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
VSX2-201ENST00000261980 PARD3Q8TEW0 1356 aa21.09■□□□□ 0.97
VSX2-201ENST00000261980 CLUAP1Q96AJ1 413 aa21.08■□□□□ 0.97
VSX2-201ENST00000261980 MFAP1P55081 439 aaKnown RBP21.08■□□□□ 0.96
VSX2-201ENST00000261980 GRPEL1Q9HAV7 217 aa21.08■□□□□ 0.96
VSX2-201ENST00000261980 FSD2A1L4K1 749 aa21.07■□□□□ 0.96
VSX2-201ENST00000261980 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
VSX2-201ENST00000261980 APAF1O14727 1248 aa21.07■□□□□ 0.96
VSX2-201ENST00000261980 TNNQ9UQP3 1299 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms