RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
SCNN1A-201ENST00000228916 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
SCNN1A-201ENST00000228916 ST20-MTHFSA0A0A6YYL1 179 aa18.59■□□□□ 0.57
SCNN1A-201ENST00000228916 NUP155O75694 1391 aa18.58■□□□□ 0.57
SCNN1A-201ENST00000228916 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
SCNN1A-201ENST00000228916 PARD3Q8TEW0 1356 aa18.58■□□□□ 0.56
SCNN1A-201ENST00000228916 NEFMP07197 916 aa18.58■□□□□ 0.56
SCNN1A-201ENST00000228916 NLRP13Q86W25 1043 aa18.58■□□□□ 0.56
SCNN1A-201ENST00000228916 IL27Q8NEV9 243 aa18.56■□□□□ 0.56
SCNN1A-201ENST00000228916 KDM5DQ9BY66 1539 aa18.56■□□□□ 0.56
SCNN1A-201ENST00000228916 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
SCNN1A-201ENST00000228916 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
SCNN1A-201ENST00000228916 LAS1LQ9Y4W2 734 aaKnown RBP18.56■□□□□ 0.56
SCNN1A-201ENST00000228916 C9orf84Q5VXU9 1444 aa18.54■□□□□ 0.56
SCNN1A-201ENST00000228916 KDM2AQ9Y2K7 1162 aa18.54■□□□□ 0.56
SCNN1A-201ENST00000228916 INSRP06213 1382 aa18.54■□□□□ 0.56
SCNN1A-201ENST00000228916 PRKCSHP14314 528 aaPredicted RBP18.53■□□□□ 0.56
SCNN1A-201ENST00000228916 ZMYM4Q5VZL5 1548 aa18.53■□□□□ 0.56
SCNN1A-201ENST00000228916 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
SCNN1A-201ENST00000228916 SHANK2Q9UPX8 1470 aa18.53■□□□□ 0.56
SCNN1A-201ENST00000228916 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
SCNN1A-201ENST00000228916 ABCC10Q5T3U5 1492 aa18.52■□□□□ 0.55
SCNN1A-201ENST00000228916 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
SCNN1A-201ENST00000228916 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
SCNN1A-201ENST00000228916 PTPRGP23470 1445 aa18.5■□□□□ 0.55
SCNN1A-201ENST00000228916 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
SCNN1A-201ENST00000228916 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
SCNN1A-201ENST00000228916 SYNJ2O15056 1496 aa18.49■□□□□ 0.55
SCNN1A-201ENST00000228916 BLMP54132 1417 aaPredicted RBP18.49■□□□□ 0.55
SCNN1A-201ENST00000228916 DDRGK1Q96HY6 314 aa18.49■□□□□ 0.55
SCNN1A-201ENST00000228916 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
SCNN1A-201ENST00000228916 FBLN2P98095 1184 aa18.49■□□□□ 0.55
SCNN1A-201ENST00000228916 JPH4Q96JJ6 628 aa18.49■□□□□ 0.55
SCNN1A-201ENST00000228916 CARMIL2Q6F5E8 1435 aa18.48■□□□□ 0.55
SCNN1A-201ENST00000228916 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
SCNN1A-201ENST00000228916 ABCA8O94911 1581 aa18.47■□□□□ 0.55
SCNN1A-201ENST00000228916 ATP10BO94823 1461 aa18.47■□□□□ 0.55
SCNN1A-201ENST00000228916 TRPM1Q7Z4N2 1603 aa18.46■□□□□ 0.55
SCNN1A-201ENST00000228916 TSPY4P0CV99 314 aa18.45■□□□□ 0.54
SCNN1A-201ENST00000228916 TSPY10P0CW01 314 aa18.45■□□□□ 0.54
SCNN1A-201ENST00000228916 HNRNPMP52272 730 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCNN1A-201ENST00000228916 CRBNQ96SW2 442 aa18.45■□□□□ 0.54
SCNN1A-201ENST00000228916 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
SCNN1A-201ENST00000228916 PLIN1O60240 522 aa18.45■□□□□ 0.54
SCNN1A-201ENST00000228916 NUP160Q12769 1436 aa18.44■□□□□ 0.54
SCNN1A-201ENST00000228916 PRAG1Q86YV5 1406 aa18.44■□□□□ 0.54
SCNN1A-201ENST00000228916 COL17A1Q9UMD9 1497 aaPredicted RBP18.42■□□□□ 0.54
SCNN1A-201ENST00000228916 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
SCNN1A-201ENST00000228916 KDM2BQ8NHM5 1336 aa18.41■□□□□ 0.54
SCNN1A-201ENST00000228916 FAM135AQ9P2D6 1515 aa18.41■□□□□ 0.54
SCNN1A-201ENST00000228916 RTN4Q9NQC3 1192 aaKnown RBP18.4■□□□□ 0.54
SCNN1A-201ENST00000228916 ARHGEF5Q12774 1597 aa18.4■□□□□ 0.54
SCNN1A-201ENST00000228916 SKAP1Q86WV1 359 aa18.4■□□□□ 0.54
SCNN1A-201ENST00000228916 LAMC1P11047 1609 aa18.4■□□□□ 0.54
SCNN1A-201ENST00000228916 GSE1Q14687 1217 aa18.38■□□□□ 0.53
SCNN1A-201ENST00000228916 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
SCNN1A-201ENST00000228916 NFKBIBQ15653 356 aa18.37■□□□□ 0.53
SCNN1A-201ENST00000228916 SAMD9LQ8IVG5 1584 aa18.37■□□□□ 0.53
SCNN1A-201ENST00000228916 PRDM15P57071 1507 aaPredicted RBP18.37■□□□□ 0.53
SCNN1A-201ENST00000228916 CDC42BPBQ9Y5S2 1711 aa18.36■□□□□ 0.53
SCNN1A-201ENST00000228916 TESK2Q96S53 571 aa18.36■□□□□ 0.53
SCNN1A-201ENST00000228916 RGL3Q3MIN7 710 aa18.35■□□□□ 0.53
SCNN1A-201ENST00000228916 CCDC144AA2RUR9 1427 aa18.35■□□□□ 0.53
SCNN1A-201ENST00000228916 DISP3Q9P2K9 1392 aa18.35■□□□□ 0.53
SCNN1A-201ENST00000228916 C20orf194Q5TEA3 1177 aa18.35■□□□□ 0.53
SCNN1A-201ENST00000228916 CENPQQ7L2Z9 268 aaPredicted RBP18.35■□□□□ 0.53
SCNN1A-201ENST00000228916 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
SCNN1A-201ENST00000228916 CC2D1BQ5T0F9 858 aaKnown RBP18.34■□□□□ 0.53
SCNN1A-201ENST00000228916 PLA2R1Q13018 1463 aa18.33■□□□□ 0.53
SCNN1A-201ENST00000228916 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
SCNN1A-201ENST00000228916 PANK3Q9H999 370 aa18.32■□□□□ 0.52
SCNN1A-201ENST00000228916 A2MP01023 1474 aa18.32■□□□□ 0.52
SCNN1A-201ENST00000228916 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
SCNN1A-201ENST00000228916 FAM161AQ3B820 660 aa18.31■□□□□ 0.52
SCNN1A-201ENST00000228916 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
SCNN1A-201ENST00000228916 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
SCNN1A-201ENST00000228916 C8orf34Q49A92 452 aa18.31■□□□□ 0.52
SCNN1A-201ENST00000228916 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
SCNN1A-201ENST00000228916 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
SCNN1A-201ENST00000228916 ADAMTS8Q9UP79 889 aa18.28■□□□□ 0.52
SCNN1A-201ENST00000228916 EIF2AK4Q9P2K8 1649 aaKnown RBP18.28■□□□□ 0.52
SCNN1A-201ENST00000228916 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
SCNN1A-201ENST00000228916 MYO5CQ9NQX4 1742 aa18.28■□□□□ 0.52
SCNN1A-201ENST00000228916 UNC13BO14795 1591 aa18.27■□□□□ 0.52
SCNN1A-201ENST00000228916 SYCP2Q9BX26 1530 aa18.27■□□□□ 0.52
SCNN1A-201ENST00000228916 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.52
SCNN1A-201ENST00000228916 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
SCNN1A-201ENST00000228916 DAXXQ9UER7 740 aaPredicted RBP18.27■□□□□ 0.52
SCNN1A-201ENST00000228916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.51
SCNN1A-201ENST00000228916 TMF1P82094 1093 aa18.25■□□□□ 0.51
SCNN1A-201ENST00000228916 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
SCNN1A-201ENST00000228916 RSPH4AQ5TD94 716 aa18.25■□□□□ 0.51
SCNN1A-201ENST00000228916 TTC37Q6PGP7 1564 aa18.22■□□□□ 0.51
SCNN1A-201ENST00000228916 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.22■□□□□ 0.51
SCNN1A-201ENST00000228916 MAST1Q9Y2H9 1570 aa18.22■□□□□ 0.51
SCNN1A-201ENST00000228916 IQGAP3Q86VI3 1631 aa18.22■□□□□ 0.51
SCNN1A-201ENST00000228916 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
SCNN1A-201ENST00000228916 WDR7Q9Y4E6 1490 aa18.22■□□□□ 0.51
SCNN1A-201ENST00000228916 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
SCNN1A-201ENST00000228916 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
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