RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 MYOM3Q5VTT5 1437 aa14.91□□□□□ -0.02
DNMT3B-201ENST00000201963 PDE4AP27815 886 aa14.91□□□□□ -0.02
DNMT3B-201ENST00000201963 USP35Q9P2H5 1018 aa14.91□□□□□ -0.02
DNMT3B-201ENST00000201963 SLKQ9H2G2 1235 aaPredicted RBP14.9□□□□□ -0.02
DNMT3B-201ENST00000201963 SOX12O15370 315 aa14.9□□□□□ -0.02
DNMT3B-201ENST00000201963 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
DNMT3B-201ENST00000201963 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
DNMT3B-201ENST00000201963 NEUROD2Q15784 382 aa14.88□□□□□ -0.03
DNMT3B-201ENST00000201963 IL27Q8NEV9 243 aa14.88□□□□□ -0.03
DNMT3B-201ENST00000201963 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
DNMT3B-201ENST00000201963 FGD6Q6ZV73 1430 aa14.88□□□□□ -0.03
DNMT3B-201ENST00000201963 CHD1O14646 1710 aa14.88□□□□□ -0.03
DNMT3B-201ENST00000201963 ADGRL1O94910 1474 aa14.87□□□□□ -0.03
DNMT3B-201ENST00000201963 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
DNMT3B-201ENST00000201963 GSE1Q14687 1217 aa14.86□□□□□ -0.03
DNMT3B-201ENST00000201963 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
DNMT3B-201ENST00000201963 L1TD1Q5T7N2 865 aaKnown RBP14.86□□□□□ -0.03
DNMT3B-201ENST00000201963 GZF1Q9H116 711 aaPredicted RBP14.86□□□□□ -0.03
DNMT3B-201ENST00000201963 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
DNMT3B-201ENST00000201963 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
DNMT3B-201ENST00000201963 PNNQ9H307 717 aaKnown RBP14.85□□□□□ -0.03
DNMT3B-201ENST00000201963 FANCAO15360 1455 aa14.85□□□□□ -0.03
DNMT3B-201ENST00000201963 ERCC6L2Q5T890 1561 aa14.84□□□□□ -0.03
DNMT3B-201ENST00000201963 PCF11O94913 1555 aaKnown RBP14.84□□□□□ -0.03
DNMT3B-201ENST00000201963 GOLGA6L22H0YM25 854 aa14.83□□□□□ -0.03
DNMT3B-201ENST00000201963 DISP1Q96F81 1524 aa14.83□□□□□ -0.04
DNMT3B-201ENST00000201963 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
DNMT3B-201ENST00000201963 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
DNMT3B-201ENST00000201963 ABCC2Q92887 1545 aa14.81□□□□□ -0.04
DNMT3B-201ENST00000201963 SRPK2P78362 688 aaKnown RBP14.81□□□□□ -0.04
DNMT3B-201ENST00000201963 HSPA2P54652 639 aa14.81□□□□□ -0.04
DNMT3B-201ENST00000201963 DENND4BO75064 1496 aaPredicted RBP14.81□□□□□ -0.04
DNMT3B-201ENST00000201963 PLIN1O60240 522 aa14.8□□□□□ -0.04
DNMT3B-201ENST00000201963 FBXO31Q5XUX0 539 aaPredicted RBP14.8□□□□□ -0.04
DNMT3B-201ENST00000201963 KIAA0556O60303 1618 aa14.8□□□□□ -0.04
DNMT3B-201ENST00000201963 AKNAQ7Z591 1439 aa14.8□□□□□ -0.04
DNMT3B-201ENST00000201963 TXNDC2Q86VQ3 553 aa14.8□□□□□ -0.04
DNMT3B-201ENST00000201963 ANKRD50Q9ULJ7 1429 aa14.79□□□□□ -0.04
DNMT3B-201ENST00000201963 POGZQ7Z3K3 1410 aa14.79□□□□□ -0.04
DNMT3B-201ENST00000201963 UGGT2Q9NYU1 1516 aa14.79□□□□□ -0.04
DNMT3B-201ENST00000201963 SLC26A8Q96RN1 970 aa14.78□□□□□ -0.04
DNMT3B-201ENST00000201963 TRAK1Q9UPV9 953 aa14.78□□□□□ -0.04
DNMT3B-201ENST00000201963 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
DNMT3B-201ENST00000201963 FTSJ3Q8IY81 847 aaKnown RBP14.77□□□□□ -0.04
DNMT3B-201ENST00000201963 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.05
DNMT3B-201ENST00000201963 BRPF3Q9ULD4 1205 aa14.76□□□□□ -0.05
DNMT3B-201ENST00000201963 PTMAP06454 111 aaKnown RBP14.75□□□□□ -0.05
DNMT3B-201ENST00000201963 RSPH6AQ9H0K4 717 aa14.75□□□□□ -0.05
DNMT3B-201ENST00000201963 TNNT2P45379 298 aaPredicted RBP14.75□□□□□ -0.05
DNMT3B-201ENST00000201963 RALBP1Q15311 655 aa14.75□□□□□ -0.05
DNMT3B-201ENST00000201963 DNTTIP2Q5QJE6 756 aaKnown RBP14.75□□□□□ -0.05
DNMT3B-201ENST00000201963 RAPGEF6Q8TEU7 1601 aa14.74□□□□□ -0.05
DNMT3B-201ENST00000201963 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
DNMT3B-201ENST00000201963 RBM33Q96EV2 1170 aaKnown RBP14.74□□□□□ -0.05
DNMT3B-201ENST00000201963 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
DNMT3B-201ENST00000201963 EHBP1L1Q8N3D4 1523 aa14.73□□□□□ -0.05
DNMT3B-201ENST00000201963 HSP90AB1P08238 724 aaKnown RBP14.73□□□□□ -0.05
DNMT3B-201ENST00000201963 TEX14Q8IWB6 1497 aa14.73□□□□□ -0.05
DNMT3B-201ENST00000201963 VSIG10Q8N0Z9 540 aa14.72□□□□□ -0.05
DNMT3B-201ENST00000201963 CCDC184Q52MB2 194 aa14.72□□□□□ -0.05
DNMT3B-201ENST00000201963 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
DNMT3B-201ENST00000201963 NFKBIBQ15653 356 aa14.72□□□□□ -0.05
DNMT3B-201ENST00000201963 GOLGA6L3A6NEY3 463 aa14.72□□□□□ -0.05
DNMT3B-201ENST00000201963 PDE3BQ13370 1112 aa14.72□□□□□ -0.05
DNMT3B-201ENST00000201963 HSCBQ8IWL3 235 aa14.71□□□□□ -0.05
DNMT3B-201ENST00000201963 TIAM1Q13009 1591 aa14.71□□□□□ -0.05
DNMT3B-201ENST00000201963 KIF14Q15058 1648 aa14.71□□□□□ -0.05
DNMT3B-201ENST00000201963 THEMISQ8N1K5 641 aaPredicted RBP14.71□□□□□ -0.05
DNMT3B-201ENST00000201963 CCDC144AA2RUR9 1427 aa14.71□□□□□ -0.05
DNMT3B-201ENST00000201963 PIP4K2BP78356 416 aa14.71□□□□□ -0.06
DNMT3B-201ENST00000201963 CRBNQ96SW2 442 aa14.71□□□□□ -0.06
DNMT3B-201ENST00000201963 MYH16Q9H6N6 1097 aa14.71□□□□□ -0.06
DNMT3B-201ENST00000201963 MS4A1P11836 297 aa14.7□□□□□ -0.06
DNMT3B-201ENST00000201963 PLEKHH2Q8IVE3 1493 aa14.7□□□□□ -0.06
DNMT3B-201ENST00000201963 CDCA8Q53HL2 280 aa14.7□□□□□ -0.06
DNMT3B-201ENST00000201963 TMEM132EQ6IEE7 984 aa14.7□□□□□ -0.06
DNMT3B-201ENST00000201963 TPRNQ4KMQ1 711 aa14.69□□□□□ -0.06
DNMT3B-201ENST00000201963 TMF1P82094 1093 aa14.69□□□□□ -0.06
DNMT3B-201ENST00000201963 ARID3AQ99856 593 aa14.69□□□□□ -0.06
DNMT3B-201ENST00000201963 VGFO15240 615 aaPredicted RBP14.69□□□□□ -0.06
DNMT3B-201ENST00000201963 HSP90AA2PQ14568 343 aaPredicted RBP14.69□□□□□ -0.06
DNMT3B-201ENST00000201963 CTTNBP2Q8WZ74 1663 aa14.69□□□□□ -0.06
DNMT3B-201ENST00000201963 FAM161AQ3B820 660 aa14.69□□□□□ -0.06
DNMT3B-201ENST00000201963 PLCH2O75038 1416 aa14.68□□□□□ -0.06
DNMT3B-201ENST00000201963 MSNP26038 577 aaKnown RBP14.68□□□□□ -0.06
DNMT3B-201ENST00000201963 ANKLE2Q86XL3 938 aa14.67□□□□□ -0.06
DNMT3B-201ENST00000201963 TSPOAP1O95153 1857 aa14.67□□□□□ -0.06
DNMT3B-201ENST00000201963 PROSER2Q86WR7 435 aaPredicted RBP14.67□□□□□ -0.06
DNMT3B-201ENST00000201963 TRAPPC8Q9Y2L5 1435 aa14.66□□□□□ -0.06
DNMT3B-201ENST00000201963 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
DNMT3B-201ENST00000201963 CCDC9Q9Y3X0 531 aaKnown RBP14.66□□□□□ -0.06
DNMT3B-201ENST00000201963 CCDC7Q96M83 1385 aa14.66□□□□□ -0.06
DNMT3B-201ENST00000201963 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
DNMT3B-201ENST00000201963 NGDNQ8NEJ9 315 aaKnown RBP14.65□□□□□ -0.06
DNMT3B-201ENST00000201963 KIF7Q2M1P5 1343 aa14.65□□□□□ -0.06
DNMT3B-201ENST00000201963 ST20-MTHFSA0A0A6YYL1 179 aa14.65□□□□□ -0.06
DNMT3B-201ENST00000201963 GPATCH8Q9UKJ3 1502 aaKnown RBP14.65□□□□□ -0.06
DNMT3B-201ENST00000201963 CAMSAP2Q08AD1 1489 aa14.65□□□□□ -0.06
DNMT3B-201ENST00000201963 CCDC141Q6ZP82 1450 aa14.65□□□□□ -0.06
DNMT3B-201ENST00000201963 CFAP53Q96M91 514 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms