RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
TMEM38A-201ENST00000187762 NFKBIBQ15653 356 aa19.72■□□□□ 0.75
TMEM38A-201ENST00000187762 ANKRD50Q9ULJ7 1429 aa19.72■□□□□ 0.75
TMEM38A-201ENST00000187762 CNGB1Q14028 1251 aaPredicted RBP19.72■□□□□ 0.75
TMEM38A-201ENST00000187762 ABCA8O94911 1581 aa19.71■□□□□ 0.75
TMEM38A-201ENST00000187762 PLEKHD1A6NEE1 506 aa19.71■□□□□ 0.75
TMEM38A-201ENST00000187762 ZMYND15Q9H091 742 aa19.71■□□□□ 0.75
TMEM38A-201ENST00000187762 BCORL1Q5H9F3 1711 aa19.71■□□□□ 0.75
TMEM38A-201ENST00000187762 BACH2Q9BYV9 841 aa19.71■□□□□ 0.75
TMEM38A-201ENST00000187762 ATP10BO94823 1461 aa19.7■□□□□ 0.74
TMEM38A-201ENST00000187762 POLR3GLQ9BT43 218 aa19.7■□□□□ 0.74
TMEM38A-201ENST00000187762 ABCC10Q5T3U5 1492 aa19.7■□□□□ 0.74
TMEM38A-201ENST00000187762 USP47Q96K76 1375 aa19.68■□□□□ 0.74
TMEM38A-201ENST00000187762 VSIG10Q8N0Z9 540 aa19.68■□□□□ 0.74
TMEM38A-201ENST00000187762 C9orf84Q5VXU9 1444 aa19.67■□□□□ 0.74
TMEM38A-201ENST00000187762 NUP155O75694 1391 aa19.66■□□□□ 0.74
TMEM38A-201ENST00000187762 DDRGK1Q96HY6 314 aa19.65■□□□□ 0.74
TMEM38A-201ENST00000187762 KDM5CP41229 1560 aa19.64■□□□□ 0.73
TMEM38A-201ENST00000187762 MS4A1P11836 297 aa19.63■□□□□ 0.73
TMEM38A-201ENST00000187762 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.73
TMEM38A-201ENST00000187762 SHANK2Q9UPX8 1470 aa19.62■□□□□ 0.73
TMEM38A-201ENST00000187762 DCAF11Q8TEB1 546 aa19.62■□□□□ 0.73
TMEM38A-201ENST00000187762 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
TMEM38A-201ENST00000187762 TSPY4P0CV99 314 aa19.6■□□□□ 0.73
TMEM38A-201ENST00000187762 TSPY10P0CW01 314 aa19.6■□□□□ 0.73
TMEM38A-201ENST00000187762 KIF15Q9NS87 1388 aa19.58■□□□□ 0.73
TMEM38A-201ENST00000187762 KDM2AQ9Y2K7 1162 aa19.58■□□□□ 0.72
TMEM38A-201ENST00000187762 PODXL2Q9NZ53 605 aa19.57■□□□□ 0.72
TMEM38A-201ENST00000187762 CDC42BPBQ9Y5S2 1711 aa19.56■□□□□ 0.72
TMEM38A-201ENST00000187762 RALGAPBQ86X10 1494 aa19.56■□□□□ 0.72
TMEM38A-201ENST00000187762 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
TMEM38A-201ENST00000187762 UHRF1BP1Q6BDS2 1440 aa19.56■□□□□ 0.72
TMEM38A-201ENST00000187762 CARD11Q9BXL7 1154 aa19.55■□□□□ 0.72
TMEM38A-201ENST00000187762 SAMD9LQ8IVG5 1584 aa19.55■□□□□ 0.72
TMEM38A-201ENST00000187762 PTPRGP23470 1445 aa19.55■□□□□ 0.72
TMEM38A-201ENST00000187762 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
TMEM38A-201ENST00000187762 PLEKHG5O94827 1062 aa19.55■□□□□ 0.72
TMEM38A-201ENST00000187762 ARHGEF5Q12774 1597 aa19.53■□□□□ 0.72
TMEM38A-201ENST00000187762 EXOC6Q8TAG9 804 aa19.53■□□□□ 0.72
TMEM38A-201ENST00000187762 RRAGDQ9NQL2 400 aaPredicted RBP19.53■□□□□ 0.72
TMEM38A-201ENST00000187762 SLC4A3P48751 1232 aa19.52■□□□□ 0.72
TMEM38A-201ENST00000187762 ARHGEF12Q9NZN5 1544 aa19.52■□□□□ 0.71
TMEM38A-201ENST00000187762 PREX2Q70Z35 1606 aa19.51■□□□□ 0.71
TMEM38A-201ENST00000187762 CCDC141Q6ZP82 1450 aa19.5■□□□□ 0.71
TMEM38A-201ENST00000187762 ST20-MTHFSA0A0A6YYL1 179 aa19.49■□□□□ 0.71
TMEM38A-201ENST00000187762 FRAT2O75474 233 aaPredicted RBP19.49■□□□□ 0.71
TMEM38A-201ENST00000187762 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
TMEM38A-201ENST00000187762 FAM135AQ9P2D6 1515 aa19.48■□□□□ 0.71
TMEM38A-201ENST00000187762 CHD1O14646 1710 aa19.48■□□□□ 0.71
TMEM38A-201ENST00000187762 DAXXQ9UER7 740 aaPredicted RBP19.48■□□□□ 0.71
TMEM38A-201ENST00000187762 HSP90AA2PQ14568 343 aaPredicted RBP19.47■□□□□ 0.71
TMEM38A-201ENST00000187762 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
TMEM38A-201ENST00000187762 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
TMEM38A-201ENST00000187762 TTC37Q6PGP7 1564 aa19.46■□□□□ 0.71
TMEM38A-201ENST00000187762 RRP9O43818 475 aaKnown RBP19.46■□□□□ 0.71
TMEM38A-201ENST00000187762 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
TMEM38A-201ENST00000187762 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
TMEM38A-201ENST00000187762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.7
TMEM38A-201ENST00000187762 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
TMEM38A-201ENST00000187762 PNISRQ8TF01 805 aaKnown RBP19.41■□□□□ 0.7
TMEM38A-201ENST00000187762 NAP1L5Q96NT1 182 aaPredicted RBP19.41■□□□□ 0.7
TMEM38A-201ENST00000187762 TMC1Q8TDI8 760 aa19.4■□□□□ 0.7
TMEM38A-201ENST00000187762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.4■□□□□ 0.7
TMEM38A-201ENST00000187762 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
TMEM38A-201ENST00000187762 HSP90AA1P07900 732 aaKnown RBP19.4■□□□□ 0.7
TMEM38A-201ENST00000187762 E9PCH4 1651 aa19.4■□□□□ 0.7
TMEM38A-201ENST00000187762 CCDC144AA2RUR9 1427 aa19.4■□□□□ 0.7
TMEM38A-201ENST00000187762 TRPM1Q7Z4N2 1603 aa19.39■□□□□ 0.7
TMEM38A-201ENST00000187762 NBPF1Q3BBV0 1214 aa19.37■□□□□ 0.69
TMEM38A-201ENST00000187762 SKAP1Q86WV1 359 aa19.37■□□□□ 0.69
TMEM38A-201ENST00000187762 PRAG1Q86YV5 1406 aa19.37■□□□□ 0.69
TMEM38A-201ENST00000187762 UNC13BO14795 1591 aa19.37■□□□□ 0.69
TMEM38A-201ENST00000187762 PLA2R1Q13018 1463 aa19.37■□□□□ 0.69
TMEM38A-201ENST00000187762 RSPH4AQ5TD94 716 aa19.36■□□□□ 0.69
TMEM38A-201ENST00000187762 MYO5CQ9NQX4 1742 aa19.35■□□□□ 0.69
TMEM38A-201ENST00000187762 MAST1Q9Y2H9 1570 aa19.35■□□□□ 0.69
TMEM38A-201ENST00000187762 RCAN3Q9UKA8 241 aa19.35■□□□□ 0.69
TMEM38A-201ENST00000187762 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
TMEM38A-201ENST00000187762 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
TMEM38A-201ENST00000187762 PNNQ9H307 717 aaKnown RBP19.34■□□□□ 0.69
TMEM38A-201ENST00000187762 A2MP01023 1474 aa19.33■□□□□ 0.69
TMEM38A-201ENST00000187762 POGKQ9P215 609 aa19.33■□□□□ 0.68
TMEM38A-201ENST00000187762 L1TD1Q5T7N2 865 aaKnown RBP19.32■□□□□ 0.68
TMEM38A-201ENST00000187762 MYBBP1AQ9BQG0 1328 aaKnown RBP19.32■□□□□ 0.68
TMEM38A-201ENST00000187762 ABCC2Q92887 1545 aa19.31■□□□□ 0.68
TMEM38A-201ENST00000187762 IQGAP3Q86VI3 1631 aa19.31■□□□□ 0.68
TMEM38A-201ENST00000187762 LRPPRCP42704 1394 aaKnown RBP19.3■□□□□ 0.68
TMEM38A-201ENST00000187762 PLXNC1O60486 1568 aa19.3■□□□□ 0.68
TMEM38A-201ENST00000187762 BRD4O60885 1362 aaPredicted RBP19.29■□□□□ 0.68
TMEM38A-201ENST00000187762 CLCN1P35523 988 aa19.29■□□□□ 0.68
TMEM38A-201ENST00000187762 RALBP1Q15311 655 aa19.29■□□□□ 0.68
TMEM38A-201ENST00000187762 DISP3Q9P2K9 1392 aa19.26■□□□□ 0.67
TMEM38A-201ENST00000187762 KTN1Q86UP2 1357 aaKnown RBP19.25■□□□□ 0.67
TMEM38A-201ENST00000187762 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
TMEM38A-201ENST00000187762 DUOX2Q9NRD8 1548 aa19.25■□□□□ 0.67
TMEM38A-201ENST00000187762 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
TMEM38A-201ENST00000187762 PARD3Q8TEW0 1356 aa19.24■□□□□ 0.67
TMEM38A-201ENST00000187762 FAM161AQ3B820 660 aa19.23■□□□□ 0.67
TMEM38A-201ENST00000187762 COL17A1Q9UMD9 1497 aaPredicted RBP19.23■□□□□ 0.67
TMEM38A-201ENST00000187762 ZCCHC11Q5TAX3 1644 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms