RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 KDM5DQ9BY66 1539 aa43.6■■■■■ 4.57
PDCD2-201ENST00000167218 RNF17Q9BXT8 1623 aaKnown RBP43.59■■■■■ 4.57
PDCD2-201ENST00000167218 EIF2AK4Q9P2K8 1649 aaKnown RBP43.59■■■■■ 4.57
PDCD2-201ENST00000167218 STRCQ7RTU9 1775 aa43.58■■■■■ 4.57
PDCD2-201ENST00000167218 DUOX2Q9NRD8 1548 aa43.58■■■■■ 4.57
PDCD2-201ENST00000167218 WASHC2CQ9Y4E1 1318 aa43.54■■■■■ 4.56
PDCD2-201ENST00000167218 KIF15Q9NS87 1388 aa43.54■■■■■ 4.56
PDCD2-201ENST00000167218 RRP7BPQ9NSQ0 103 aa43.5■■■■■ 4.55
PDCD2-201ENST00000167218 MROH1Q8NDA8 1641 aa43.49■■■■■ 4.55
PDCD2-201ENST00000167218 MYO3AQ8NEV4 1616 aa43.49■■■■■ 4.55
PDCD2-201ENST00000167218 PZPP20742 1482 aa43.47■■■■■ 4.55
PDCD2-201ENST00000167218 FBXO31Q5XUX0 539 aaPredicted RBP43.45■■■■■ 4.55
PDCD2-201ENST00000167218 ZNF142P52746 1687 aaPredicted RBP43.45■■■■■ 4.55
PDCD2-201ENST00000167218 CHIC2Q9UKJ5 165 aa43.44■■■■■ 4.54
PDCD2-201ENST00000167218 ERBINQ96RT1 1412 aa43.44■■■■■ 4.54
PDCD2-201ENST00000167218 ABCC3O15438 1527 aa43.43■■■■■ 4.54
PDCD2-201ENST00000167218 FAM50AQ14320 339 aaKnown RBP43.43■■■■■ 4.54
PDCD2-201ENST00000167218 ILDR1Q86SU0 546 aaPredicted RBP43.41■■■■■ 4.54
PDCD2-201ENST00000167218 ANKRD30AQ9BXX3 1397 aa43.41■■■■■ 4.54
PDCD2-201ENST00000167218 NCOA1Q15788 1441 aa43.4■■■■■ 4.54
PDCD2-201ENST00000167218 ZC3H13Q5T200 1668 aaKnown RBP43.4■■■■■ 4.54
PDCD2-201ENST00000167218 CEP170BQ9Y4F5 1589 aaPredicted RBP43.4■■■■■ 4.54
PDCD2-201ENST00000167218 CAMSAP1Q5T5Y3 1602 aa43.37■■■■■ 4.53
PDCD2-201ENST00000167218 DMRT2Q9Y5R5 561 aa43.37■■■■■ 4.53
PDCD2-201ENST00000167218 ADGRL2O95490 1459 aa43.37■■■■■ 4.53
PDCD2-201ENST00000167218 TNRQ92752 1358 aa43.35■■■■■ 4.53
PDCD2-201ENST00000167218 PPARGC1BQ86YN6 1023 aaKnown RBP43.34■■■■■ 4.53
PDCD2-201ENST00000167218 PRDM15P57071 1507 aaPredicted RBP43.32■■■■■ 4.53
PDCD2-201ENST00000167218 CEP152O94986 1710 aa43.32■■■■■ 4.53
PDCD2-201ENST00000167218 A2ML1A8K2U0 1454 aa43.32■■■■■ 4.52
PDCD2-201ENST00000167218 PTPRTO14522 1441 aa43.31■■■■■ 4.52
PDCD2-201ENST00000167218 DEPDC5O75140 1603 aa43.3■■■■■ 4.52
PDCD2-201ENST00000167218 PLA2R1Q13018 1463 aa43.25■■■■■ 4.51
PDCD2-201ENST00000167218 SPATA31D1Q6ZQQ2 1576 aa43.22■■■■■ 4.51
PDCD2-201ENST00000167218 NCKAP5LQ9HCH0 1330 aa43.2■■■■■ 4.51
PDCD2-201ENST00000167218 CFAP65Q6ZU64 1925 aaKnown RBP43.19■■■■■ 4.5
PDCD2-201ENST00000167218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.18■■■■■ 4.5
PDCD2-201ENST00000167218 ERVK-7P63135 1459 aa43.18■■■■■ 4.5
PDCD2-201ENST00000167218 NLRP1Q9C000 1473 aa43.17■■■■■ 4.5
PDCD2-201ENST00000167218 ARHGAP31Q2M1Z3 1444 aa43.16■■■■■ 4.5
PDCD2-201ENST00000167218 VWDEQ8N2E2 1590 aa43.15■■■■■ 4.5
PDCD2-201ENST00000167218 PKD2Q13563 968 aa43.14■■■■■ 4.5
PDCD2-201ENST00000167218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.14■■■■■ 4.5
PDCD2-201ENST00000167218 FBXO41Q8TF61 875 aa43.13■■■■■ 4.49
PDCD2-201ENST00000167218 ANKRD50Q9ULJ7 1429 aa43.12■■■■■ 4.49
PDCD2-201ENST00000167218 CERKQ8TCT0 537 aa43.11■■■■■ 4.49
PDCD2-201ENST00000167218 KANK1Q14678 1352 aa43.11■■■■■ 4.49
PDCD2-201ENST00000167218 LMTK2Q8IWU2 1503 aa43.09■■■■■ 4.49
PDCD2-201ENST00000167218 ROCK1Q13464 1354 aa43.07■■■■■ 4.49
PDCD2-201ENST00000167218 UGGT1Q9NYU2 1555 aa43.06■■■■■ 4.48
PDCD2-201ENST00000167218 THEMISQ8N1K5 641 aaPredicted RBP43.02■■■■■ 4.48
PDCD2-201ENST00000167218 LTBP4Q8N2S1 1624 aa42.99■■■■■ 4.47
PDCD2-201ENST00000167218 RRBP1Q9P2E9 1410 aaKnown RBP42.97■■■■■ 4.47
PDCD2-201ENST00000167218 POLR1AO95602 1720 aaPredicted RBP42.97■■■■■ 4.47
PDCD2-201ENST00000167218 NEURL4Q96JN8 1562 aa42.96■■■■■ 4.47
PDCD2-201ENST00000167218 ITGAEP38570 1179 aa42.96■■■■■ 4.47
PDCD2-201ENST00000167218 EFCAB6Q5THR3 1501 aa42.92■■■■■ 4.46
PDCD2-201ENST00000167218 UBR1Q8IWV7 1749 aa42.91■■■■■ 4.46
PDCD2-201ENST00000167218 ANKLE2Q86XL3 938 aa42.9■■■■■ 4.46
PDCD2-201ENST00000167218 UNC13BO14795 1591 aa42.9■■■■■ 4.46
PDCD2-201ENST00000167218 ZNF335Q9H4Z2 1342 aaPredicted RBP42.86■■■■■ 4.45
PDCD2-201ENST00000167218 NOS1P29475 1434 aa42.84■■■■■ 4.45
PDCD2-201ENST00000167218 MED14O60244 1454 aa42.83■■■■■ 4.45
PDCD2-201ENST00000167218 SYNMO15061 1565 aa42.82■■■■■ 4.44
PDCD2-201ENST00000167218 TET3O43151 1660 aa42.81■■■■■ 4.44
PDCD2-201ENST00000167218 PIK3C2BO00750 1634 aa42.79■■■■■ 4.44
PDCD2-201ENST00000167218 RPRD2Q5VT52 1461 aaKnown RBP42.78■■■■■ 4.44
PDCD2-201ENST00000167218 IDI1Q13907 227 aa42.76■■■■■ 4.44
PDCD2-201ENST00000167218 NPHP4O75161 1426 aaPredicted RBP42.76■■■■■ 4.44
PDCD2-201ENST00000167218 ARHGAP23Q9P227 1491 aa42.74■■■■■ 4.43
PDCD2-201ENST00000167218 GCC2Q8IWJ2 1684 aa42.74■■■■■ 4.43
PDCD2-201ENST00000167218 SLIT1O75093 1534 aa42.73■■■■■ 4.43
PDCD2-201ENST00000167218 IQGAP3Q86VI3 1631 aa42.72■■■■■ 4.43
PDCD2-201ENST00000167218 IQSEC2Q5JU85 1478 aa42.71■■■■■ 4.43
PDCD2-201ENST00000167218 KDM5AP29375 1690 aaKnown RBP42.7■■■■■ 4.43
PDCD2-201ENST00000167218 IQGAP1P46940 1657 aa42.7■■■■■ 4.43
PDCD2-201ENST00000167218 LTKP29376 864 aa42.67■■■■■ 4.42
PDCD2-201ENST00000167218 SCAF11Q99590 1463 aaKnown RBP42.66■■■■■ 4.42
PDCD2-201ENST00000167218 NUP155O75694 1391 aa42.65■■■■■ 4.42
PDCD2-201ENST00000167218 SLC52A1Q9NWF4 448 aa42.65■■■■■ 4.42
PDCD2-201ENST00000167218 E9PCH4 1651 aa42.65■■■■■ 4.42
PDCD2-201ENST00000167218 TMEM2Q9UHN6 1383 aa42.63■■■■■ 4.41
PDCD2-201ENST00000167218 TXNDC2Q86VQ3 553 aa42.61■■■■■ 4.41
PDCD2-201ENST00000167218 STAG3Q9UJ98 1225 aa42.61■■■■■ 4.41
PDCD2-201ENST00000167218 NAIPQ13075 1403 aa42.61■■■■■ 4.41
PDCD2-201ENST00000167218 ADGRB3O60242 1522 aa42.58■■■■■ 4.41
PDCD2-201ENST00000167218 EID1Q9Y6B2 187 aa42.54■■■■■ 4.4
PDCD2-201ENST00000167218 CPS1P31327 1500 aa42.53■■■■■ 4.4
PDCD2-201ENST00000167218 HFM1A2PYH4 1435 aa42.49■■■■■ 4.39
PDCD2-201ENST00000167218 MYO5BQ9ULV0 1848 aa42.48■■■■■ 4.39
PDCD2-201ENST00000167218 STRCP1A6NGW2 1772 aa42.47■■■■■ 4.39
PDCD2-201ENST00000167218 TMEM131LA2VDJ0 1609 aa42.46■■■■■ 4.39
PDCD2-201ENST00000167218 ZFYVE9O95405 1425 aa42.38■■■■■ 4.38
PDCD2-201ENST00000167218 UBAP1LF5GYI3 381 aa42.34■■■■■ 4.37
PDCD2-201ENST00000167218 SPHKAPQ2M3C7 1700 aa42.33■■■■■ 4.37
PDCD2-201ENST00000167218 LRRC7Q96NW7 1537 aa42.3■■■■■ 4.36
PDCD2-201ENST00000167218 RIMS2Q9UQ26 1411 aa42.3■■■■■ 4.36
PDCD2-201ENST00000167218 CHGAP10645 457 aaKnown RBP42.29■■■■■ 4.36
PDCD2-201ENST00000167218 SLC26A8Q96RN1 970 aa42.25■■■■■ 4.35
PDCD2-201ENST00000167218 TRIM52Q96A61 297 aa42.23■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms