RNA–Protein interactions for RNA: ENSMUST00000071370.6

Pcdh17-201, Transcript of Protocadherin 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh17, Length 11,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17-201ENSMUST00000071370 Efcab5A0JP43 1406 aa9.38□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 CgnP59242 1191 aa9.38□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Vps8Q0P5W1 1427 aa9.38□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 B4galnt3Q6L8S8 986 aa9.38□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Fbxo2Q80UW2 297 aa9.37□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Rpap1Q80TE0 1409 aa9.37□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Dusp9Q7TNL7 452 aa9.37□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Gprasp1Q5U4C1 1347 aa9.37□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Znf710Q3U288 666 aa9.37□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Kri1Q8VDQ9 704 aaKnown RBP9.37□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Camsap2Q8C1B1 1461 aa9.37□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Tpd52l1O54818 204 aa9.37□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 EzrP26040 586 aaKnown RBP9.36□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Gtf2e1Q9D0D5 440 aa9.36□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Mical1Q8VDP3 1048 aa9.36□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Nolc1E9Q5C9 702 aaKnown RBP9.36□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Atl3Q91YH5 541 aa9.36□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Ccdc47Q9D024 483 aaKnown RBP9.35□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 CftrP26361 1476 aa9.35□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Arid3cA6PWV5 409 aa9.35□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Trim30aP15533 496 aa9.35□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Map3k1P53349 1493 aa9.35□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Tmco5bQ80X59 307 aa9.35□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Birc3O08863 600 aa9.35□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Taf3Q5HZG4 932 aa9.35□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Plekhh2Q8C115 1491 aa9.34□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Pak3Q61036 559 aa9.34□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Tpm4Q6IRU2 248 aa9.34□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Paf1Q8K2T8 535 aa9.34□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 AknaQ80VW7 1404 aa9.34□□□□□ -0.91
Pcdh17-201ENSMUST00000071370 Top2aQ01320 1528 aaKnown RBP9.33□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Dhx57Q6P5D3 1388 aaKnown RBP9.33□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ddx11Q6AXC6 880 aa9.33□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ecm2Q5FW85 670 aa9.33□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Rabep1O35551 862 aa9.33□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 ScaperF8VQ70 1398 aaKnown RBP9.33□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Fam43aQ8BUP8 424 aa9.33□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Sycp2Q9CUU3 1500 aa9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Rock1P70335 1354 aa9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Brpf1B2RRD7 1212 aa9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Exoc6Q8R313 802 aa9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 U2af1Q9D883 239 aaKnown RBP9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Synj1Q8CHC4 1574 aa9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Gm21969J3QJZ1 289 aa9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Chrna2Q91X60 512 aa9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Cwc15Q9JHS9 229 aaKnown RBP9.32□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ftsj3Q9DBE9 838 aaKnown RBP9.31□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ccer1Q9CQL2 403 aa9.31□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Pdcl2Q78Y63 240 aa9.31□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Smarca4Q3TKT4 1613 aaKnown RBP9.31□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ncapd3Q6ZQK0 1506 aa9.31□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Speer4f1Q9D5Q6 258 aa9.31□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ifit1bl1D3Z6F0 470 aa9.3□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Hspa5P20029 655 aaKnown RBP9.3□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 CrebrfQ8CDG5 640 aaKnown RBP9.3□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ppm1eQ80TL0 749 aa9.3□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Plekhh1Q80TI1 1356 aa9.3□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Fez1Q8K0X8 392 aa9.3□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 St18Q80TY4 1045 aa9.3□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ralbp1Q62172 648 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Cecr2E9Q2Z1 1453 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Kiaa0754Q69ZZ9 979 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ap3b2Q9JME5 1082 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Krt82Q99M74 516 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Lemd3Q9WU40 921 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ccnb3Q810T2 1396 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Map4P27546 1125 aaKnown RBP9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Trap1aP19473 224 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Hmgn5Q9JL35 406 aa9.29□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Cc2d2aQ8CFW7 1633 aa9.28□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Ccdc34Q3UI66 367 aa9.28□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 PrkcshO08795 521 aa9.28□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Pkd2O35245 966 aa9.28□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Odf2A3KGV1 830 aaKnown RBP9.28□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Zrsr2Q62377 462 aaKnown RBP9.28□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Chmp4cQ9D7F7 232 aa9.27□□□□□ -0.92
Pcdh17-201ENSMUST00000071370 Carmil1Q6EDY6 1374 aa9.27□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Anp32eP97822 260 aaKnown RBP9.27□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Top2bQ64511 1612 aa9.27□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Znf330Q922H9 316 aa9.27□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Pibf1E9Q6K3 756 aa9.26□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Ccar1Q8CH18 1146 aaKnown RBP9.26□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Kif7B7ZNG0 1348 aa9.26□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Tpm1P58771 284 aa9.26□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Rundc1Q0VDN7 615 aa9.26□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Golga2Q921M4 999 aa9.26□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Senp3Q9EP97 568 aaKnown RBP9.26□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Rsph4aQ8BYM7 716 aa9.26□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Mphosph9A6H5Y1 991 aa9.25□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 ScribQ80U72 1612 aa9.25□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Casq1O09165 405 aa9.25□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Kif27Q7M6Z4 1394 aa9.25□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Gm45140A0A0N4SUM8 220 aa9.25□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Dhx16G3X8X0 1044 aaKnown RBP9.25□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Slc4a10Q5DTL9 1118 aa9.25□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Cetn4Q8K4K1 168 aa9.25□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Fez2Q6TYB5 348 aa9.24□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Gripap1Q8VD04 806 aa9.24□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 TchhA0A0B4J1F9 1599 aa9.24□□□□□ -0.93
Pcdh17-201ENSMUST00000071370 Kif4P33174 1231 aa9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms