RNA–Protein interactions for RNA: ENSMUST00000071370.6

Pcdh17-201, Transcript of Protocadherin 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh17, Length 11,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17-201ENSMUST00000071370 Rhox8Q6VSS7 320 aa13.08□□□□□ -0.32
Pcdh17-201ENSMUST00000071370 Rpgrip1Q9EPQ2 1331 aa13.05□□□□□ -0.32
Pcdh17-201ENSMUST00000071370 Las1lA2BE28 776 aaKnown RBP12.32□□□□□ -0.44
Pcdh17-201ENSMUST00000071370 Rtl1Q7M732 1744 aa12.31□□□□□ -0.44
Pcdh17-201ENSMUST00000071370 Cngb1E1AZ71 1325 aa12.27□□□□□ -0.45
Pcdh17-201ENSMUST00000071370 Ccdc180J3QNE4 1664 aa11.96□□□□□ -0.49
Pcdh17-201ENSMUST00000071370 Myt1Q8CFC2 1127 aa11.92□□□□□ -0.5
Pcdh17-201ENSMUST00000071370 Pelp1Q9DBD5 1123 aaKnown RBP11.86□□□□□ -0.51
Pcdh17-201ENSMUST00000071370 Ube2uB1AUC4 352 aa11.8□□□□□ -0.52
Pcdh17-201ENSMUST00000071370 Esf1Q3V1V3 845 aaKnown RBP11.7□□□□□ -0.54
Pcdh17-201ENSMUST00000071370 Ehmt2Q9Z148 1263 aaKnown RBP11.69□□□□□ -0.54
Pcdh17-201ENSMUST00000071370 Zeb1Q64318 1117 aa11.63□□□□□ -0.55
Pcdh17-201ENSMUST00000071370 Wdr66E9Q743 1299 aa11.62□□□□□ -0.55
Pcdh17-201ENSMUST00000071370 Acin1Q9JIX8 1338 aaKnown RBP11.61□□□□□ -0.55
Pcdh17-201ENSMUST00000071370 NischQ80TM9 1593 aa11.57□□□□□ -0.56
Pcdh17-201ENSMUST00000071370 CenpbP27790 599 aa11.51□□□□□ -0.57
Pcdh17-201ENSMUST00000071370 Npm2Q80W85 207 aa11.46□□□□□ -0.57
Pcdh17-201ENSMUST00000071370 Ccdc136Q3TVA9 1136 aa11.46□□□□□ -0.58
Pcdh17-201ENSMUST00000071370 NefmP08553 848 aa11.42□□□□□ -0.58
Pcdh17-201ENSMUST00000071370 Stra8P70278 393 aa11.37□□□□□ -0.59
Pcdh17-201ENSMUST00000071370 Gab3Q8BSM5 595 aa11.34□□□□□ -0.59
Pcdh17-201ENSMUST00000071370 Myt1lP97500 1187 aa11.32□□□□□ -0.6
Pcdh17-201ENSMUST00000071370 Amer1Q7TS75 1132 aa11.3□□□□□ -0.6
Pcdh17-201ENSMUST00000071370 HrcG5E8J6 738 aa11.26□□□□□ -0.61
Pcdh17-201ENSMUST00000071370 Trim41Q5NCC3 630 aa11.22□□□□□ -0.61
Pcdh17-201ENSMUST00000071370 Rtl5Q5DTT4 599 aa11.22□□□□□ -0.61
Pcdh17-201ENSMUST00000071370 Tnnt3Q9QZ47 272 aa11.16□□□□□ -0.62
Pcdh17-201ENSMUST00000071370 Pcgf6Q99NA9 353 aa11.1□□□□□ -0.63
Pcdh17-201ENSMUST00000071370 Slc24a1Q91WD8 1130 aa11.08□□□□□ -0.64
Pcdh17-201ENSMUST00000071370 4930567H17RikQ3V0K5 233 aa11.05□□□□□ -0.64
Pcdh17-201ENSMUST00000071370 Cdk11bP24788 784 aaKnown RBP11□□□□□ -0.65
Pcdh17-201ENSMUST00000071370 UbtfP25976 765 aaKnown RBP10.97□□□□□ -0.65
Pcdh17-201ENSMUST00000071370 Abcc9P70170 1546 aa10.96□□□□□ -0.66
Pcdh17-201ENSMUST00000071370 Neurod1Q60867 357 aa10.94□□□□□ -0.66
Pcdh17-201ENSMUST00000071370 Dcaf1Q80TR8 1506 aa10.93□□□□□ -0.66
Pcdh17-201ENSMUST00000071370 Os9Q8K2C7 672 aa10.9□□□□□ -0.66
Pcdh17-201ENSMUST00000071370 Anp32bQ9EST5 272 aaKnown RBP10.88□□□□□ -0.67
Pcdh17-201ENSMUST00000071370 Il27Q8K3I6 234 aa10.87□□□□□ -0.67
Pcdh17-201ENSMUST00000071370 DiexfQ8BTT6 772 aaKnown RBP10.86□□□□□ -0.67
Pcdh17-201ENSMUST00000071370 NeflP08551 543 aa10.81□□□□□ -0.68
Pcdh17-201ENSMUST00000071370 NrdcQ8BHG1 1161 aa10.81□□□□□ -0.68
Pcdh17-201ENSMUST00000071370 Nop58Q6DFW4 536 aaKnown RBP10.8□□□□□ -0.68
Pcdh17-201ENSMUST00000071370 Ttbk1Q6PCN3 1308 aa10.8□□□□□ -0.68
Pcdh17-201ENSMUST00000071370 Ccdc9Q8VC31 543 aaKnown RBP10.78□□□□□ -0.68
Pcdh17-201ENSMUST00000071370 4933416C03RikQ3V063 378 aa10.77□□□□□ -0.69
Pcdh17-201ENSMUST00000071370 Aplp2Q06335 707 aa10.73□□□□□ -0.69
Pcdh17-201ENSMUST00000071370 Fam50aQ9WV03 339 aaKnown RBP10.73□□□□□ -0.69
Pcdh17-201ENSMUST00000071370 Ap3b1Q9Z1T1 1105 aa10.71□□□□□ -0.7
Pcdh17-201ENSMUST00000071370 Anks4bQ8K3X6 423 aa10.7□□□□□ -0.7
Pcdh17-201ENSMUST00000071370 Gm35339A0A140LHH9 1649 aa10.69□□□□□ -0.7
Pcdh17-201ENSMUST00000071370 Eif5bQ05D44 1216 aaKnown RBP10.67□□□□□ -0.7
Pcdh17-201ENSMUST00000071370 ClspnQ80YR7 1315 aa10.67□□□□□ -0.7
Pcdh17-201ENSMUST00000071370 NclP09405 707 aaKnown RBP10.67□□□□□ -0.7
Pcdh17-201ENSMUST00000071370 Anp32aO35381 247 aa10.66□□□□□ -0.7
Pcdh17-201ENSMUST00000071370 Gm13697A2AK42 830 aa10.63□□□□□ -0.71
Pcdh17-201ENSMUST00000071370 Supt5hO55201 1082 aaKnown RBP10.62□□□□□ -0.71
Pcdh17-201ENSMUST00000071370 TonslQ6NZL6 1363 aa10.57□□□□□ -0.72
Pcdh17-201ENSMUST00000071370 Chic1Q8CBW7 227 aa10.55□□□□□ -0.72
Pcdh17-201ENSMUST00000071370 Cep164Q5DU05 1446 aa10.54□□□□□ -0.72
Pcdh17-201ENSMUST00000071370 Zbtb7cQ8VCZ7 619 aa10.53□□□□□ -0.72
Pcdh17-201ENSMUST00000071370 Hnrnpul2Q00PI9 745 aaKnown RBP10.5□□□□□ -0.73
Pcdh17-201ENSMUST00000071370 Abcc8B2RUS7 1588 aa10.49□□□□□ -0.73
Pcdh17-201ENSMUST00000071370 Atp1b4Q99ME6 356 aa10.48□□□□□ -0.73
Pcdh17-201ENSMUST00000071370 Ifnlr1Q8CGK5 535 aa10.46□□□□□ -0.74
Pcdh17-201ENSMUST00000071370 Gm13695A2AK44 830 aa10.44□□□□□ -0.74
Pcdh17-201ENSMUST00000071370 Nlrp6Q91WS2 869 aa10.43□□□□□ -0.74
Pcdh17-201ENSMUST00000071370 Erich6D3Z6S9 713 aa10.42□□□□□ -0.74
Pcdh17-201ENSMUST00000071370 Zcchc6Q5BLK4 1491 aaKnown RBP10.42□□□□□ -0.74
Pcdh17-201ENSMUST00000071370 Plppr3Q7TPB0 716 aa10.41□□□□□ -0.74
Pcdh17-201ENSMUST00000071370 Mier1Q5UAK0 511 aa10.36□□□□□ -0.75
Pcdh17-201ENSMUST00000071370 Npm1Q61937 292 aaKnown RBP10.36□□□□□ -0.75
Pcdh17-201ENSMUST00000071370 Ppargc1bQ8VHJ7 1014 aa10.36□□□□□ -0.75
Pcdh17-201ENSMUST00000071370 Polr3glQ8R0C0 218 aa10.35□□□□□ -0.75
Pcdh17-201ENSMUST00000071370 Ccer2J3QPU5 274 aa10.34□□□□□ -0.75
Pcdh17-201ENSMUST00000071370 Zbtb4Q5F293 982 aa10.33□□□□□ -0.76
Pcdh17-201ENSMUST00000071370 Prdm10Q3UTQ7 1184 aa10.32□□□□□ -0.76
Pcdh17-201ENSMUST00000071370 Upf2A2AT37 1269 aaKnown RBP10.32□□□□□ -0.76
Pcdh17-201ENSMUST00000071370 Brd4Q9ESU6 1400 aaKnown RBP10.31□□□□□ -0.76
Pcdh17-201ENSMUST00000071370 Hdac5Q9Z2V6 1113 aa10.3□□□□□ -0.76
Pcdh17-201ENSMUST00000071370 Ythdc1E9Q5K9 736 aaKnown RBP10.29□□□□□ -0.76
Pcdh17-201ENSMUST00000071370 Lmod2Q3UHZ5 550 aa10.27□□□□□ -0.77
Pcdh17-201ENSMUST00000071370 Rb1cc1Q9ESK9 1588 aa10.27□□□□□ -0.77
Pcdh17-201ENSMUST00000071370 CatipB9EKE5 520 aa10.25□□□□□ -0.77
Pcdh17-201ENSMUST00000071370 DaxxO35613 739 aa10.24□□□□□ -0.77
Pcdh17-201ENSMUST00000071370 Csrnp3P59055 597 aa10.24□□□□□ -0.77
Pcdh17-201ENSMUST00000071370 Hsp90aa1P07901 733 aaKnown RBP10.21□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 1700123L14RikQ3V2K7 440 aa10.19□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 Ccdc27Q3V036 639 aa10.18□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 ArxO35085 564 aa10.18□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 Safb2Q80YR5 991 aaKnown RBP10.18□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 Sall2Q9QX96 1004 aa10.18□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 Calr4Q3TQS0 420 aa10.17□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 Fkbp15Q6P9Q6 1216 aaKnown RBP10.17□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 Wdr43Q6ZQL4 677 aaKnown RBP10.15□□□□□ -0.78
Pcdh17-201ENSMUST00000071370 Plekhg3Q4VAC9 1341 aa10.13□□□□□ -0.79
Pcdh17-201ENSMUST00000071370 Rangap1P46061 589 aaKnown RBP10.13□□□□□ -0.79
Pcdh17-201ENSMUST00000071370 Baz1aO88379 1555 aa10.12□□□□□ -0.79
Pcdh17-201ENSMUST00000071370 Bcl11aQ9QYE3 773 aa10.11□□□□□ -0.79
Pcdh17-201ENSMUST00000071370 Znf326O88291 580 aa10.09□□□□□ -0.79
Pcdh17-201ENSMUST00000071370 Irx3P81067 507 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms