RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Atad2bE9Q166 1460 aaKnown RBP18.32■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Ylpm1Q9R0I7 1386 aaKnown RBP18.32■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Rab11fip3Q8CHD8 1047 aa18.32■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Rock1P70335 1354 aa18.31■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Tsen2Q6P7W5 460 aa18.3■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Stk31Q99MW1 1018 aa18.3■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 WrnO09053 1401 aa18.29■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Tnnt1O88346 262 aa18.29■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Glipr1l2Q9CQ35 332 aa18.29■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Ralbp1Q62172 648 aa18.29■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Fan1Q69ZT1 1020 aa18.29■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 LrpprcQ6PB66 1392 aaKnown RBP18.29■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Rsph3aQ3UFY4 516 aa18.29■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Smarca2Q6DIC0 1577 aa18.28■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Pank3Q8R2W9 370 aa18.28■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Utp14aQ640M1 767 aaKnown RBP18.27■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 GorabQ8BRM2 368 aa18.27■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Brpf1B2RRD7 1212 aa18.26■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Ciz1Q8VEH2 845 aa18.26■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Ap3b2Q9JME5 1082 aa18.25■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Fam184bQ0KK56 942 aa18.24■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Ccdc47Q9D024 483 aaKnown RBP18.24■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Sox12Q04890 314 aa18.24■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Chmp3Q9CQ10 224 aa18.23■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 GsdmaQ9EST1 446 aa18.23■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Becn1O88597 448 aa18.23■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 St18Q80TY4 1045 aa18.22■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Ankrd36D3Z4K0 1415 aa18.22■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Ggt6Q6PDE7 497 aa18.22■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Znf316Q6PGE4 1016 aa18.22■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Synj1Q8CHC4 1574 aa18.22■□□□□ 0.51
Pcdh20-201ENSMUST00000061628 Ncoa2Q61026 1462 aa18.2■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Cecr2E9Q2Z1 1453 aa18.2■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Mre11Q61216 706 aa18.2■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Ccer1Q9CQL2 403 aa18.2■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Ccdc60Q8C4J0 545 aa18.19■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 G3bp1P97855 465 aaKnown RBP18.19■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 CrebrfQ8CDG5 640 aaKnown RBP18.18■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Ccdc146E9Q9F7 977 aa18.18■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Smarca4Q3TKT4 1613 aaKnown RBP18.18■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 VgfQ0VGU4 617 aa18.18■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Kiaa0754Q69ZZ9 979 aa18.18■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Tpm3P21107 285 aaKnown RBP18.17■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Usp40Q8BWR4 1235 aa18.17■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Smc4Q8CG47 1286 aa18.17■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Filip1lQ6P6L0 1131 aa18.17■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Inpp5dQ9ES52 1191 aa18.17■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Kif7B7ZNG0 1348 aa18.17■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Cux1P53564 1515 aa18.16■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Nsd2Q8BVE8 1365 aa18.16■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Trim30aP15533 496 aa18.16■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Trim58Q5NCC9 485 aa18.16■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Dapk1Q80YE7 1442 aa18.16■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Sf3a1Q8K4Z5 791 aaKnown RBP18.16■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Kif16bB1AVY7 1312 aa18.15■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Zscan10Q3URR7 782 aa18.15■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 SlkO54988 1233 aa18.15■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 SetQ9EQU5 289 aaKnown RBP18.15■□□□□ 0.5
Pcdh20-201ENSMUST00000061628 Srek1Q8BZX4 494 aaKnown RBP18.14■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Dhx29Q6PGC1 1365 aaKnown RBP18.14■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Cttnbp2B9EJA2 1648 aa18.14■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Pibf1E9Q6K3 756 aa18.14■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Casq1O09165 405 aa18.14■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Nap1l3Q794H2 544 aa18.14■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Ush1cQ9ES64 910 aa18.13■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Tpd52l1O54818 204 aa18.13■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Slc4a10Q5DTL9 1118 aa18.13■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Gprasp1Q5U4C1 1347 aa18.13■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Cplx2P84086 134 aa18.13■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Atl3Q91YH5 541 aa18.12■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 KinQ8K339 391 aa18.12■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Nolc1E9Q5C9 702 aaKnown RBP18.11■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Evc2Q8K1G2 1220 aa18.11■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Cabp4Q8VHC5 271 aa18.11■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Cc2d2bA0A286YDU8 1405 aa18.1■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 ChgaP26339 463 aaKnown RBP18.1■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 ErbinQ80TH2 1402 aa18.1■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 A0A1L1SQF0 893 aa18.09■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Shq1Q7TMX5 569 aa18.08■□□□□ 0.49
Pcdh20-201ENSMUST00000061628 Tpm1P58771 284 aa18.07■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Q8BT18 775 aa18.07■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Tceal9Q9DD24 104 aa18.07■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Sh3bgrQ9WUZ7 214 aa18.06■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Gm21969J3QJZ1 289 aa18.06■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Jph4Q80WT0 628 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Map7d2A2AG50 781 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Rnf20Q5DTM8 973 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Ecm2Q5FW85 670 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Ddx11Q6AXC6 880 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Cetn4Q8K4K1 168 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Gnai1B2RSH2 354 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Gnai3Q9DC51 354 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Prdm16A2A935 1275 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Tpm2P58774 284 aa18.05■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Rabep1O35551 862 aa18.04■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Polr1aO35134 1717 aaKnown RBP18.04■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Pak3Q61036 559 aa18.04■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Vps8Q0P5W1 1427 aa18.04■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Ipo7Q9EPL8 1038 aaKnown RBP18.03■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Tdrd9Q14BI7 1383 aa18.02■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms