RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Mapk8ip3Q9ESN9 1337 aa14.5□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Znf330Q922H9 316 aa14.5□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Eif4g1Q6NZJ6 1600 aaKnown RBP14.5□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Kif16bB1AVY7 1312 aa14.49□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Srcin1Q9QWI6 1250 aa14.49□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Frmpd1A2AKB4 1549 aa14.48□□□□□ -0.09
Topbp1-201ENSMUST00000035164 WrnO09053 1401 aa14.48□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Tspyl2Q7TQI8 677 aa14.48□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Stk24Q99KH8 431 aa14.48□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Tdrd9Q14BI7 1383 aa14.47□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Ccdc183A2AJB1 534 aa14.47□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Ccdc30Q8BVF4 654 aa14.47□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Gm1043A0A140LJC2 1431 aa14.47□□□□□ -0.09
Topbp1-201ENSMUST00000035164 SlkO54988 1233 aa14.47□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Duox2A2AQ99 1517 aa14.46□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Camsap1A2AHC3 1581 aa14.45□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Lmod3E9QA62 571 aa14.45□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Nkx1-2P42580 305 aa14.45□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Kank1E9Q238 1360 aa14.45□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Rprd2Q6NXI6 1469 aaKnown RBP14.43□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Soga1E1U8D0 1418 aa14.43□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Ksr2Q3UVC0 959 aa14.43□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Tnpo1Q8BFY9 898 aaKnown RBP14.42□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Srpk2O54781 681 aaKnown RBP14.42□□□□□ -0.1
Topbp1-201ENSMUST00000035164 GorabQ8BRM2 368 aa14.42□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Abcc5Q9R1X5 1436 aa14.41□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Pdcl3Q8BVF2 240 aa14.41□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Rfx1P48377 963 aa14.41□□□□□ -0.1
Topbp1-201ENSMUST00000035164 IbspQ61711 324 aa14.41□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Fam184bQ0KK56 942 aa14.4□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Ppp2r1aQ76MZ3 589 aa14.4□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Camsap2Q8C1B1 1461 aa14.4□□□□□ -0.1
Topbp1-201ENSMUST00000035164 Kif7B7ZNG0 1348 aa14.39□□□□□ -0.11
Topbp1-201ENSMUST00000035164 U2af1Q9D883 239 aaKnown RBP14.38□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Phldb1Q6PDH0 1371 aaKnown RBP14.38□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Mug1P28665 1476 aa14.38□□□□□ -0.11
Topbp1-201ENSMUST00000035164 CadpsQ80TJ1 1355 aa14.37□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Tmco5bQ80X59 307 aa14.37□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Erich6bQ9D4S6 220 aa14.37□□□□□ -0.11
Topbp1-201ENSMUST00000035164 PtmaP26350 111 aa14.37□□□□□ -0.11
Topbp1-201ENSMUST00000035164 PrxO55103 1391 aa14.36□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Sart1Q9Z315 806 aaKnown RBP14.36□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Fan1Q69ZT1 1020 aa14.36□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Gtf2e1Q9D0D5 440 aa14.36□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Smc5Q8CG46 1101 aaKnown RBP14.36□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Cc2d2bA0A286YDU8 1405 aa14.36□□□□□ -0.11
Topbp1-201ENSMUST00000035164 EprsQ8CGC7 1512 aaKnown RBP14.35□□□□□ -0.11
Topbp1-201ENSMUST00000035164 PogzQ8BZH4 1409 aaKnown RBP14.35□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Urb2E9Q7L1 1524 aaKnown RBP14.34□□□□□ -0.11
Topbp1-201ENSMUST00000035164 NexmifQ5DTT1 1515 aa14.34□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Plekhh1Q80TI1 1356 aa14.34□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Dhx57Q6P5D3 1388 aaKnown RBP14.33□□□□□ -0.11
Topbp1-201ENSMUST00000035164 Myom3A2ABU4 1439 aa14.32□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Lamc3Q9R0B6 1581 aa14.32□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Paxip1Q6NZQ4 1056 aa14.31□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Trim58Q5NCC9 485 aa14.31□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Stag3O70576 1240 aa14.3□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Map7O88735 730 aa14.3□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Crocc2F6XLV1 1638 aa14.3□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Apaf1O88879 1249 aa14.3□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Ppp1r9bQ6R891 817 aaKnown RBP14.3□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Atxn3Q9CVD2 355 aa14.29□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Nutm1Q8BHP2 1126 aa14.29□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Plin1Q8CGN5 517 aa14.29□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Stk11ipQ3TAA7 1072 aa14.28□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Exosc9Q9JHI7 438 aaKnown RBP14.28□□□□□ -0.12
Topbp1-201ENSMUST00000035164 1700019A02RikA0A087WPV9 146 aa14.28□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Rabep1O35551 862 aa14.28□□□□□ -0.12
Topbp1-201ENSMUST00000035164 TnnQ80Z71 1560 aa14.27□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Pik3c2gO70167 1506 aa14.27□□□□□ -0.12
Topbp1-201ENSMUST00000035164 Ralbp1Q62172 648 aa14.27□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Ssh1Q76I79 1042 aa14.27□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Gtf2a1Q99PM3 378 aa14.27□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Sptbn5F6UCX4 1208 aa14.26□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Rrp12Q6P5B0 1295 aaKnown RBP14.25□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Gas2l2Q5SSG4 860 aa14.25□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Usp40Q8BWR4 1235 aa14.25□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Ylpm1Q9R0I7 1386 aaKnown RBP14.25□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Ppp2r3aB2RXC8 1150 aa14.25□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Tsen2Q6P7W5 460 aa14.24□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Stk26Q99JT2 416 aa14.24□□□□□ -0.13
Topbp1-201ENSMUST00000035164 KnstrnQ9D9Z1 312 aaKnown RBP14.24□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Wdr62Q3U3T8 1523 aa14.23□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Gpatch8A2A6A1 1505 aa14.23□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Mug2P28666 1451 aa14.23□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Nectin2P32507 530 aa14.23□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Rab3gap2Q8BMG7 1366 aa14.23□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Dennd4bQ3U1Y4 1499 aa14.23□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Ccdc60Q8C4J0 545 aa14.23□□□□□ -0.13
Topbp1-201ENSMUST00000035164 GsdmaQ9EST1 446 aa14.23□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Il16O54824 1322 aa14.22□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Polr1aO35134 1717 aaKnown RBP14.22□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Thoc2B1AZI6 1594 aaKnown RBP14.22□□□□□ -0.13
Topbp1-201ENSMUST00000035164 BC005561E9Q5E2 1589 aa14.22□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Erich3F6QRE9 1637 aa14.21□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Kif3bQ61771 747 aa14.21□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Kdm2bQ6P1G2 1309 aa14.21□□□□□ -0.13
Topbp1-201ENSMUST00000035164 Ccar1Q8CH18 1146 aaKnown RBP14.21□□□□□ -0.13
Topbp1-201ENSMUST00000035164 AknaQ80VW7 1404 aa14.21□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Mcm4P49717 862 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms