RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Rhox8Q6VSS7 320 aa19.95■□□□□ 0.78
Topbp1-201ENSMUST00000035164 Ehmt2Q9Z148 1263 aaKnown RBP19.07■□□□□ 0.64
Topbp1-201ENSMUST00000035164 NischQ80TM9 1593 aa18.92■□□□□ 0.62
Topbp1-201ENSMUST00000035164 Rpgrip1Q9EPQ2 1331 aa18.89■□□□□ 0.61
Topbp1-201ENSMUST00000035164 Acin1Q9JIX8 1338 aaKnown RBP18.36■□□□□ 0.53
Topbp1-201ENSMUST00000035164 Ccdc136Q3TVA9 1136 aa18.28■□□□□ 0.52
Topbp1-201ENSMUST00000035164 Pcgf6Q99NA9 353 aa18.17■□□□□ 0.5
Topbp1-201ENSMUST00000035164 Abcc9P70170 1546 aa18.01■□□□□ 0.47
Topbp1-201ENSMUST00000035164 Ccdc180J3QNE4 1664 aa17.96■□□□□ 0.47
Topbp1-201ENSMUST00000035164 Zeb1Q64318 1117 aa17.94■□□□□ 0.46
Topbp1-201ENSMUST00000035164 Trim41Q5NCC3 630 aa17.87■□□□□ 0.45
Topbp1-201ENSMUST00000035164 Supt5hO55201 1082 aaKnown RBP17.81■□□□□ 0.44
Topbp1-201ENSMUST00000035164 Rtl1Q7M732 1744 aa17.72■□□□□ 0.43
Topbp1-201ENSMUST00000035164 Gab3Q8BSM5 595 aa17.72■□□□□ 0.43
Topbp1-201ENSMUST00000035164 HrcG5E8J6 738 aa17.69■□□□□ 0.42
Topbp1-201ENSMUST00000035164 Abcc8B2RUS7 1588 aa17.55■□□□□ 0.4
Topbp1-201ENSMUST00000035164 Las1lA2BE28 776 aaKnown RBP17.55■□□□□ 0.4
Topbp1-201ENSMUST00000035164 Wdr66E9Q743 1299 aa17.51■□□□□ 0.39
Topbp1-201ENSMUST00000035164 Cngb1E1AZ71 1325 aa17.49■□□□□ 0.39
Topbp1-201ENSMUST00000035164 Neurod1Q60867 357 aa17.48■□□□□ 0.39
Topbp1-201ENSMUST00000035164 Gm35339A0A140LHH9 1649 aa17.41■□□□□ 0.38
Topbp1-201ENSMUST00000035164 Ppargc1bQ8VHJ7 1014 aa17.32■□□□□ 0.36
Topbp1-201ENSMUST00000035164 Dcaf1Q80TR8 1506 aa17.25■□□□□ 0.35
Topbp1-201ENSMUST00000035164 NefmP08553 848 aa17.23■□□□□ 0.35
Topbp1-201ENSMUST00000035164 UbtfP25976 765 aaKnown RBP17.18■□□□□ 0.34
Topbp1-201ENSMUST00000035164 Sall2Q9QX96 1004 aa17.14■□□□□ 0.34
Topbp1-201ENSMUST00000035164 Mier1Q5UAK0 511 aa17.14■□□□□ 0.33
Topbp1-201ENSMUST00000035164 Zcchc6Q5BLK4 1491 aaKnown RBP17.11■□□□□ 0.33
Topbp1-201ENSMUST00000035164 Esf1Q3V1V3 845 aaKnown RBP17.08■□□□□ 0.32
Topbp1-201ENSMUST00000035164 Csrnp3P59055 597 aa17.05■□□□□ 0.32
Topbp1-201ENSMUST00000035164 Myt1lP97500 1187 aa17.01■□□□□ 0.31
Topbp1-201ENSMUST00000035164 Cdk11bP24788 784 aaKnown RBP17■□□□□ 0.31
Topbp1-201ENSMUST00000035164 Gm38655A0A286YDK6 273 aa16.99■□□□□ 0.31
Topbp1-201ENSMUST00000035164 CenpbP27790 599 aa16.96■□□□□ 0.31
Topbp1-201ENSMUST00000035164 Nop58Q6DFW4 536 aaKnown RBP16.96■□□□□ 0.31
Topbp1-201ENSMUST00000035164 1700123L14RikQ3V2K7 440 aa16.93■□□□□ 0.3
Topbp1-201ENSMUST00000035164 Chic1Q8CBW7 227 aa16.92■□□□□ 0.3
Topbp1-201ENSMUST00000035164 Anks4bQ8K3X6 423 aa16.84■□□□□ 0.29
Topbp1-201ENSMUST00000035164 Cep164Q5DU05 1446 aa16.76■□□□□ 0.27
Topbp1-201ENSMUST00000035164 Aebp2Q9Z248 504 aaKnown RBP16.75■□□□□ 0.27
Topbp1-201ENSMUST00000035164 Npm2Q80W85 207 aa16.73■□□□□ 0.27
Topbp1-201ENSMUST00000035164 ClspnQ80YR7 1315 aa16.61■□□□□ 0.25
Topbp1-201ENSMUST00000035164 Rb1cc1Q9ESK9 1588 aa16.6■□□□□ 0.25
Topbp1-201ENSMUST00000035164 TonslQ6NZL6 1363 aa16.58■□□□□ 0.24
Topbp1-201ENSMUST00000035164 Mapk8ip2Q9ERE9 830 aa16.54■□□□□ 0.24
Topbp1-201ENSMUST00000035164 Aplp2Q06335 707 aa16.53■□□□□ 0.24
Topbp1-201ENSMUST00000035164 Myt1Q8CFC2 1127 aa16.5■□□□□ 0.23
Topbp1-201ENSMUST00000035164 Slc24a1Q91WD8 1130 aa16.5■□□□□ 0.23
Topbp1-201ENSMUST00000035164 Plekhg3Q4VAC9 1341 aa16.49■□□□□ 0.23
Topbp1-201ENSMUST00000035164 Eid3Q3V124 375 aa16.48■□□□□ 0.23
Topbp1-201ENSMUST00000035164 Rsf1E9PWW9 1441 aaKnown RBP16.45■□□□□ 0.22
Topbp1-201ENSMUST00000035164 Ap3b1Q9Z1T1 1105 aa16.43■□□□□ 0.22
Topbp1-201ENSMUST00000035164 Ube2uB1AUC4 352 aa16.38■□□□□ 0.21
Topbp1-201ENSMUST00000035164 DiexfQ8BTT6 772 aaKnown RBP16.35■□□□□ 0.21
Topbp1-201ENSMUST00000035164 SafbD3YXK2 937 aaKnown RBP16.32■□□□□ 0.2
Topbp1-201ENSMUST00000035164 Fam71e1A1L3C1 212 aa16.28■□□□□ 0.2
Topbp1-201ENSMUST00000035164 Baz1aO88379 1555 aa16.28■□□□□ 0.2
Topbp1-201ENSMUST00000035164 Tnnt3Q9QZ47 272 aa16.27■□□□□ 0.2
Topbp1-201ENSMUST00000035164 NclP09405 707 aaKnown RBP16.27■□□□□ 0.2
Topbp1-201ENSMUST00000035164 Il27Q8K3I6 234 aa16.25■□□□□ 0.19
Topbp1-201ENSMUST00000035164 Fam50aQ9WV03 339 aaKnown RBP16.25■□□□□ 0.19
Topbp1-201ENSMUST00000035164 Ccdc88bQ4QRL3 1481 aa16.25■□□□□ 0.19
Topbp1-201ENSMUST00000035164 Ttbk1Q6PCN3 1308 aa16.24■□□□□ 0.19
Topbp1-201ENSMUST00000035164 Hnrnpul2Q00PI9 745 aaKnown RBP16.21■□□□□ 0.19
Topbp1-201ENSMUST00000035164 Pelp1Q9DBD5 1123 aaKnown RBP16.18■□□□□ 0.18
Topbp1-201ENSMUST00000035164 Eif5bQ05D44 1216 aaKnown RBP16.17■□□□□ 0.18
Topbp1-201ENSMUST00000035164 Stra8P70278 393 aa16.16■□□□□ 0.18
Topbp1-201ENSMUST00000035164 Brd4Q9ESU6 1400 aaKnown RBP16.14■□□□□ 0.17
Topbp1-201ENSMUST00000035164 Clip1Q922J3 1391 aa16.1■□□□□ 0.17
Topbp1-201ENSMUST00000035164 Kdm5dQ62240 1548 aa16.06■□□□□ 0.16
Topbp1-201ENSMUST00000035164 Anp32aO35381 247 aa16.05■□□□□ 0.16
Topbp1-201ENSMUST00000035164 Golga3P55937 1487 aa16.05■□□□□ 0.16
Topbp1-201ENSMUST00000035164 Lmod2Q3UHZ5 550 aa16.03■□□□□ 0.16
Topbp1-201ENSMUST00000035164 Bcl11aQ9QYE3 773 aa16.01■□□□□ 0.15
Topbp1-201ENSMUST00000035164 ScribQ80U72 1612 aa15.94■□□□□ 0.14
Topbp1-201ENSMUST00000035164 Calr4Q3TQS0 420 aa15.93■□□□□ 0.14
Topbp1-201ENSMUST00000035164 NacadQ5SWP3 1504 aa15.92■□□□□ 0.14
Topbp1-201ENSMUST00000035164 Ppp4r2Q0VGB7 417 aa15.87■□□□□ 0.13
Topbp1-201ENSMUST00000035164 Amer1Q7TS75 1132 aa15.87■□□□□ 0.13
Topbp1-201ENSMUST00000035164 NrdcQ8BHG1 1161 aa15.83■□□□□ 0.12
Topbp1-201ENSMUST00000035164 Cecr2E9Q2Z1 1453 aa15.8■□□□□ 0.12
Topbp1-201ENSMUST00000035164 P3h3Q8CG70 732 aa15.79■□□□□ 0.12
Topbp1-201ENSMUST00000035164 Smarca2Q6DIC0 1577 aa15.78■□□□□ 0.12
Topbp1-201ENSMUST00000035164 Ifnlr1Q8CGK5 535 aa15.75■□□□□ 0.11
Topbp1-201ENSMUST00000035164 Rtl5Q5DTT4 599 aa15.73■□□□□ 0.11
Topbp1-201ENSMUST00000035164 Cep162Q6ZQ06 1403 aa15.72■□□□□ 0.11
Topbp1-201ENSMUST00000035164 Nolc1E9Q5C9 702 aaKnown RBP15.71■□□□□ 0.11
Topbp1-201ENSMUST00000035164 Wdr43Q6ZQL4 677 aaKnown RBP15.7■□□□□ 0.1
Topbp1-201ENSMUST00000035164 Mrs2Q5NCE8 434 aa15.68■□□□□ 0.1
Topbp1-201ENSMUST00000035164 BlmO88700 1416 aa15.68■□□□□ 0.1
Topbp1-201ENSMUST00000035164 Hspa5P20029 655 aaKnown RBP15.67■□□□□ 0.1
Topbp1-201ENSMUST00000035164 Setd5Q5XJV7 1441 aa15.66■□□□□ 0.1
Topbp1-201ENSMUST00000035164 4933416C03RikQ3V063 378 aa15.66■□□□□ 0.1
Topbp1-201ENSMUST00000035164 Sin3aQ60520 1274 aaKnown RBP15.66■□□□□ 0.1
Topbp1-201ENSMUST00000035164 PrkcshO08795 521 aa15.64■□□□□ 0.09
Topbp1-201ENSMUST00000035164 Chic2Q9D9G3 165 aa15.63■□□□□ 0.09
Topbp1-201ENSMUST00000035164 Rapgef2Q8CHG7 1496 aa15.62■□□□□ 0.09
Topbp1-201ENSMUST00000035164 Supt16hQ920B9 1047 aa15.62■□□□□ 0.09
Topbp1-201ENSMUST00000035164 Slc4a3P16283 1227 aa15.61■□□□□ 0.09
Topbp1-201ENSMUST00000035164 Znf710Q3U288 666 aa15.58■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 190.6 ms