RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 RIM1P32445 135 aaKnown RBP0.95□□□□□ -2.26
snR56snR56 QDR3P38227 689 aa0.95□□□□□ -2.26
snR56snR56 SER3P40054 469 aa0.95□□□□□ -2.26
snR56snR56 ERO1Q03103 563 aa0.95□□□□□ -2.26
snR56snR56 YRF1-4O13559 1382 aa0.95□□□□□ -2.26
snR56snR56 ZRT3P34240 503 aa0.94□□□□□ -2.26
snR56snR56 MRPL19P53875 158 aa0.94□□□□□ -2.26
snR56snR56 YMR244WQ04018 355 aa0.94□□□□□ -2.26
snR56snR56 SLM3Q12093 417 aa0.94□□□□□ -2.26
snR56snR56 RED1P14291 827 aa0.93□□□□□ -2.26
snR56snR56 YKR015CP36111 568 aa0.93□□□□□ -2.26
snR56snR56 INP1Q03694 420 aa0.93□□□□□ -2.26
snR56snR56 MYO5Q04439 1219 aaKnown RBP0.93□□□□□ -2.26
snR56snR56 AFI1Q99222 893 aa0.93□□□□□ -2.26
snR56snR56 RNA1P11745 407 aaKnown RBP0.92□□□□□ -2.26
snR56snR56 NRP1P32770 719 aaKnown RBP RIP-Chip data0.92□□□□□ -2.26not detected
snR56snR56 MOB2P43563 287 aa0.92□□□□□ -2.26
snR56snR56 ECO1P43605 281 aa0.92□□□□□ -2.26
snR56snR56 CGI121Q03705 181 aaKnown RBP0.92□□□□□ -2.26
snR56snR56 YLH47Q06493 454 aa0.92□□□□□ -2.26
snR56snR56 TFC7Q12415 435 aa0.92□□□□□ -2.26
snR56snR56 IST2P38250 946 aa0.91□□□□□ -2.26
snR56snR56 YER188WP40103 239 aa0.91□□□□□ -2.26
snR56snR56 CAX4P53223 239 aa0.91□□□□□ -2.26
snR56snR56 SUR7P54003 302 aa0.91□□□□□ -2.26
snR56snR56 TAF11Q04226 346 aa0.91□□□□□ -2.26
snR56snR56 MRX4Q12467 430 aa0.91□□□□□ -2.26
snR56snR56 POP2P39008 433 aa0.9□□□□□ -2.27
snR56snR56 MIC19P43594 170 aa0.9□□□□□ -2.27
snR56snR56 BNI5P53890 448 aaKnown RBP0.9□□□□□ -2.27
snR56snR56 RRP7P25368 297 aaPredicted RBP0.89□□□□□ -2.27
snR56snR56 NOP6Q07623 225 aaKnown RBP0.89□□□□□ -2.27
snR56snR56 YSC83P32792 385 aa0.88□□□□□ -2.27
snR56snR56 NRG2P38082 220 aa0.88□□□□□ -2.27
snR56snR56 CTM1P38818 585 aa0.88□□□□□ -2.27
snR56snR56 YIL054WP40524 105 aa0.88□□□□□ -2.27
snR56snR56 PAC11P40960 533 aa0.88□□□□□ -2.27
snR56snR56 YFR018CP43599 363 aa0.88□□□□□ -2.27
snR56snR56 TRM82Q03774 444 aa0.88□□□□□ -2.27
snR56snR56 YLR456WQ06199 204 aa0.88□□□□□ -2.27
snR56snR56 AEP3Q12089 606 aa0.88□□□□□ -2.27
snR56snR56 VPS63O13549 108 aa0.87□□□□□ -2.27
snR56snR56 CLB6P32943 380 aa0.87□□□□□ -2.27
snR56snR56 NOC2P39744 710 aaKnown RBP0.87□□□□□ -2.27
snR56snR56 RTS3P53289 263 aa0.87□□□□□ -2.27
snR56snR56 ALE1Q08548 619 aa0.87□□□□□ -2.27
snR56snR56 IES3Q12345 250 aa0.87□□□□□ -2.27
snR56snR56 URA7P28274 579 aaKnown RBP0.86□□□□□ -2.27
snR56snR56 URA10P30402 227 aa0.86□□□□□ -2.27
snR56snR56 SYF2P53277 215 aaPredicted RBP0.86□□□□□ -2.27
snR56snR56 TFS1P14306 219 aa0.85□□□□□ -2.27
snR56snR56 PHO80P20052 293 aa0.85□□□□□ -2.27
snR56snR56 PHO91P27514 894 aa0.85□□□□□ -2.27
snR56snR56 ERV1P27882 189 aa0.85□□□□□ -2.27
snR56snR56 GPD2P41911 440 aaKnown RBP0.85□□□□□ -2.27
snR56snR56 YFR054CP43622 192 aa0.85□□□□□ -2.27
snR56snR56 RTT102P53330 157 aa0.85□□□□□ -2.27
snR56snR56 MRPL8P22353 238 aa0.84□□□□□ -2.27
snR56snR56 FAD1P38913 306 aa0.84□□□□□ -2.27
snR56snR56 DAN1P47178 298 aa0.84□□□□□ -2.27
snR56snR56 RPN8Q08723 338 aaKnown RBP0.84□□□□□ -2.27
snR56snR56 ITR2P30606 609 aa0.83□□□□□ -2.28
snR56snR56 YKL071WP36086 256 aa0.83□□□□□ -2.28
snR56snR56 FAR1P21268 830 aa0.82□□□□□ -2.28
snR56snR56 AAD15Q08361 143 aa0.82□□□□□ -2.28
snR56snR56 RRI2Q12348 645 aa0.82□□□□□ -2.28
snR56snR56 SFI1Q12369 946 aa0.82□□□□□ -2.28
snR56snR56 RFT1P38206 574 aaPredicted RBP0.81□□□□□ -2.28
snR56snR56 YGL118CP53132 145 aa0.81□□□□□ -2.28
snR56snR56 FMP48P53233 369 aa0.81□□□□□ -2.28
snR56snR56 SHS1Q07657 551 aa0.81□□□□□ -2.28
snR56snR56 DET1Q99288 334 aaKnown RBP0.81□□□□□ -2.28
snR56snR56 UBA3Q99344 299 aa0.81□□□□□ -2.28
snR56snR56 HIT1P46973 164 aa0.8□□□□□ -2.28
snR56snR56 VPS72Q03388 795 aa0.8□□□□□ -2.28
snR56snR56 UBX2Q04228 584 aa0.8□□□□□ -2.28
snR56snR56 VPS68Q12016 184 aa0.8□□□□□ -2.28
snR56snR56 NFU1P32860 256 aa0.79□□□□□ -2.28
snR56snR56 NAB3P38996 802 aaKnown RBP RIP-Chip data0.79□□□□□ -2.28not detected
snR56snR56 LSM5P40089 93 aaKnown RBP0.79□□□□□ -2.28
snR56snR56 MRPL20P22354 195 aaPredicted RBP0.78□□□□□ -2.28
snR56snR56 DSK2P48510 373 aa0.78□□□□□ -2.28
snR56snR56 YHR086W-AQ3E746 53 aa0.78□□□□□ -2.28
snR56snR56 CPR2P23285 205 aa0.77□□□□□ -2.29
snR56snR56 ADK2P26364 225 aa0.77□□□□□ -2.29
snR56snR56 SLM1P40485 686 aa0.77□□□□□ -2.29
snR56snR56 YNL040WP53960 456 aaPredicted RBP0.77□□□□□ -2.29
snR56snR56 ACT1P60010 375 aaKnown RBP0.77□□□□□ -2.29
snR56snR56 NDL1Q06568 189 aa0.77□□□□□ -2.29
snR56snR56 PEX5P35056 612 aa0.76□□□□□ -2.29
snR56snR56 DCR2Q05924 578 aa0.76□□□□□ -2.29
snR56snR56 UAF30Q08747 228 aa0.76□□□□□ -2.29
snR56snR56 TAF10Q12030 206 aa0.76□□□□□ -2.29
snR56snR56 SMF2P38778 549 aa0.75□□□□□ -2.29
snR56snR56 YHR177WP38867 453 aa0.75□□□□□ -2.29
snR56snR56 YHR182WP38870 785 aa0.75□□□□□ -2.29
snR56snR56 FCY21P40039 528 aa0.75□□□□□ -2.29
snR56snR56 TCB2P48231 1178 aa0.75□□□□□ -2.29
snR56snR56 SSU72P53538 206 aaPredicted RBP0.75□□□□□ -2.29
snR56snR56 CAB3P36076 571 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms