Protein–RNA interactions for Protein: P43622

YFR054C, Uncharacterized protein YFR054C, yeastyeast

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YFR054CP43622 YML009W-BYML009W-B 477 nt18.53■□□□□ 0.56
YFR054CP43622 NSR1YGR159C 1245 nt18.43■□□□□ 0.54
YFR054CP43622 NOP1YDL014W 984 nt17.95■□□□□ 0.46
YFR054CP43622 YKL036CYKL036C 393 nt16.59■□□□□ 0.25
YFR054CP43622 MDJ1YFL016C 1536 nt16.44■□□□□ 0.22
YFR054CP43622 Q0297Q0297 156 nt15.77■□□□□ 0.12
YFR054CP43622 SRX1YKL086W 384 nt15.74■□□□□ 0.11
YFR054CP43622 YJL027CYJL027C 417 nt15.47■□□□□ 0.07
YFR054CP43622 SCS3YGL126W 1143 nt15.12■□□□□ 0.01
YFR054CP43622 YCR051WYCR051W 669 nt14.9□□□□□ -0.02
YFR054CP43622 DBP2YNL112W 1641 nt14.58□□□□□ -0.08
YFR054CP43622 YOL085CYOL085C 342 nt14.41□□□□□ -0.1
YFR054CP43622 TRN1tP(UGG)A 72 nt14.28□□□□□ -0.12
YFR054CP43622 SUF9tP(UGG)F 72 nt14.28□□□□□ -0.12
YFR054CP43622 SUF8tP(UGG)H 72 nt14.28□□□□□ -0.12
YFR054CP43622 tP(UGG)LtP(UGG)L 72 nt14.28□□□□□ -0.12
YFR054CP43622 SUF7tP(UGG)M 72 nt14.28□□□□□ -0.12
YFR054CP43622 tP(UGG)N1tP(UGG)N1 72 nt14.28□□□□□ -0.12
YFR054CP43622 tP(UGG)N2tP(UGG)N2 72 nt14.28□□□□□ -0.12
YFR054CP43622 tP(UGG)O1tP(UGG)O1 72 nt14.28□□□□□ -0.12
YFR054CP43622 SUF11tP(UGG)O2 72 nt14.28□□□□□ -0.12
YFR054CP43622 PKP1YIL042C 1185 nt14.19□□□□□ -0.14
YFR054CP43622 RPP1BYDL130W 321 nt14.14□□□□□ -0.15
YFR054CP43622 CCC1YLR220W 969 nt14.09□□□□□ -0.15
YFR054CP43622 YBR190WYBR190W 312 nt13.98□□□□□ -0.17
YFR054CP43622 RTC3YHR087W 336 nt13.63□□□□□ -0.23
YFR054CP43622 SCJ1YMR214W 1134 nt13.62□□□□□ -0.23
YFR054CP43622 RVS167YDR388W 1449 nt13.57□□□□□ -0.24
YFR054CP43622 PET122YER153C 765 nt13.54□□□□□ -0.24
YFR054CP43622 ATS1YAL020C 1002 nt13.51□□□□□ -0.25
YFR054CP43622 tP(UGG)O3tP(UGG)O3 72 nt13.49□□□□□ -0.25
YFR054CP43622 SCR1SCR1 522 nt13.31□□□□□ -0.28
YFR054CP43622 RRN5YLR141W 1092 nt13.14□□□□□ -0.31
YFR054CP43622 SHR5YOL110W 714 nt13.14□□□□□ -0.31
YFR054CP43622 YDJ1YNL064C 1230 nt13.02□□□□□ -0.33
YFR054CP43622 YER088W-BYER088W-B 147 nt12.89□□□□□ -0.35
YFR054CP43622 RSB1YOR049C 1065 nt12.83□□□□□ -0.36
YFR054CP43622 URN1YPR152C 1398 nt12.8□□□□□ -0.36
YFR054CP43622 DEP1YAL013W 1218 nt12.79□□□□□ -0.36
YFR054CP43622 PUT4YOR348C 1884 nt12.78□□□□□ -0.36
YFR054CP43622 GAR1YHR089C 618 nt12.75□□□□□ -0.37
YFR054CP43622 OPI9YLR338W 858 nt12.62□□□□□ -0.39
YFR054CP43622 YNL208WYNL208W 600 nt12.56□□□□□ -0.4
YFR054CP43622 SAH1YER043C 1350 nt12.56□□□□□ -0.4
YFR054CP43622 ARE1YCR048W 1833 nt12.54□□□□□ -0.4
YFR054CP43622 PST2YDR032C 597 nt12.54□□□□□ -0.4
YFR054CP43622 RPN10YHR200W 807 nt12.53□□□□□ -0.4
YFR054CP43622 YHR049C-AYHR049C-A 297 nt12.34□□□□□ -0.43
YFR054CP43622 POA1YBR022W 534 nt12.34□□□□□ -0.43
YFR054CP43622 TIR1YER011W 765 nt12.32□□□□□ -0.44
YFR054CP43622 SSA1YAL005C 1929 nt12.23□□□□□ -0.45
YFR054CP43622 PUN1YLR414C 792 nt12.22□□□□□ -0.45
YFR054CP43622 YJR018WYJR018W 363 nt12.19□□□□□ -0.46
YFR054CP43622 PTC2YER089C 1395 nt12.1□□□□□ -0.47
YFR054CP43622 YJR120WYJR120W 351 nt12.1□□□□□ -0.47
YFR054CP43622 SRB2YHR041C 633 nt12.09□□□□□ -0.47
YFR054CP43622 BSC6YOL137W 1494 nt12.08□□□□□ -0.48
YFR054CP43622 SHU1YHL006C 453 nt12.04□□□□□ -0.48
YFR054CP43622 BUD23YCR047C 828 nt12.02□□□□□ -0.49
YFR054CP43622 YKL097CYKL097C 411 nt11.98□□□□□ -0.49
YFR054CP43622 NAB2YGL122C 1578 nt11.93□□□□□ -0.5
YFR054CP43622 SSA3YBL075C 1950 nt11.93□□□□□ -0.5
YFR054CP43622 RPP2BYDR382W 333 nt11.89□□□□□ -0.51
YFR054CP43622 YAL037C-BYAL037C-B 975 nt11.86□□□□□ -0.51
YFR054CP43622 FIS1YIL065C 468 nt11.82□□□□□ -0.52
YFR054CP43622 WWM1YFL010C 636 nt11.8□□□□□ -0.52
YFR054CP43622 DAL1YIR027C 1383 nt11.79□□□□□ -0.52
YFR054CP43622 INM2YDR287W 879 nt11.73□□□□□ -0.53
YFR054CP43622 FPR4YLR449W 1179 nt11.72□□□□□ -0.53
YFR054CP43622 BDH2YAL061W 1254 nt11.7□□□□□ -0.54
YFR054CP43622 PHO4YFR034C 939 nt11.69□□□□□ -0.54
YFR054CP43622 HOM6YJR139C 1080 nt11.69□□□□□ -0.54
YFR054CP43622 YGR021WYGR021W 873 nt11.66□□□□□ -0.54
YFR054CP43622 MNP1YGL068W 585 nt11.64□□□□□ -0.55
YFR054CP43622 YBL100CYBL100C 315 nt11.64□□□□□ -0.55
YFR054CP43622 SPT5YML010W 3192 nt11.63□□□□□ -0.55
YFR054CP43622 YOR139CYOR139C 393 nt11.58□□□□□ -0.56
YFR054CP43622 YFL021C-AYFL021C-A 855 nt11.57□□□□□ -0.56
YFR054CP43622 LSM3YLR438C-A 270 nt11.54□□□□□ -0.56
YFR054CP43622 FUN26YAL022C 1554 nt11.52□□□□□ -0.57
YFR054CP43622 RKM5YLR137W 1104 nt11.5□□□□□ -0.57
YFR054CP43622 YPS1YLR120C 1710 nt11.48□□□□□ -0.57
YFR054CP43622 TRM9YML014W 840 nt11.46□□□□□ -0.57
YFR054CP43622 YDR095CYDR095C 411 nt11.4□□□□□ -0.58
YFR054CP43622 NPL3YDR432W 1245 nt11.39□□□□□ -0.59
YFR054CP43622 CCT6YDR188W 1641 nt11.38□□□□□ -0.59
YFR054CP43622 YOL037CYOL037C 354 nt11.38□□□□□ -0.59
YFR054CP43622 MEP2YNL142W 1500 nt11.34□□□□□ -0.59
YFR054CP43622 YHR165W-AYHR165W-A 312 nt11.3□□□□□ -0.6
YFR054CP43622 ALF1YNL148C 765 nt11.3□□□□□ -0.6
YFR054CP43622 SUF2tP(AGG)C 72 nt11.23□□□□□ -0.61
YFR054CP43622 SUF10tP(AGG)N 72 nt11.23□□□□□ -0.61
YFR054CP43622 SIS1YNL007C 1059 nt11.21□□□□□ -0.61
YFR054CP43622 DCW1YKL046C 1350 nt11.19□□□□□ -0.62
YFR054CP43622 PTP1YDL230W 1008 nt11.19□□□□□ -0.62
YFR054CP43622 RPP2AYOL039W 321 nt11.16□□□□□ -0.62
YFR054CP43622 YLR281CYLR281C 468 nt11.15□□□□□ -0.62
YFR054CP43622 tM(CAU)CtM(CAU)C 72 nt11.12□□□□□ -0.63
YFR054CP43622 IMT4tM(CAU)E 72 nt11.12□□□□□ -0.63
YFR054CP43622 IMT3tM(CAU)J3 72 nt11.12□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms