Protein–RNA interactions for Protein: P32445

RIM1, Single-stranded DNA-binding protein RIM1, mitochondrial, yeastyeast

Known RBP Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM1P32445 NSR1YGR159C 1245 nt20.46■□□□□ 0.87
RIM1P32445 YML009W-BYML009W-B 477 nt20.43■□□□□ 0.86
RIM1P32445 NOP1YDL014W 984 nt19.79■□□□□ 0.76
RIM1P32445 MDJ1YFL016C 1536 nt18.37■□□□□ 0.53
RIM1P32445 YKL036CYKL036C 393 nt18.03■□□□□ 0.48
RIM1P32445 SRX1YKL086W 384 nt17.25■□□□□ 0.35
RIM1P32445 Q0297Q0297 156 nt17.19■□□□□ 0.34
RIM1P32445 YJL027CYJL027C 417 nt16.99■□□□□ 0.31
RIM1P32445 YCR051WYCR051W 669 nt16.39■□□□□ 0.21
RIM1P32445 SCS3YGL126W 1143 nt16.26■□□□□ 0.19
RIM1P32445 DBP2YNL112W 1641 nt16.1■□□□□ 0.17
RIM1P32445 YBR190WYBR190W 312 nt15.72■□□□□ 0.11
RIM1P32445 TRN1tP(UGG)A 72 nt15.71■□□□□ 0.11
RIM1P32445 SUF9tP(UGG)F 72 nt15.71■□□□□ 0.11
RIM1P32445 SUF8tP(UGG)H 72 nt15.71■□□□□ 0.11
RIM1P32445 tP(UGG)LtP(UGG)L 72 nt15.71■□□□□ 0.11
RIM1P32445 SUF7tP(UGG)M 72 nt15.71■□□□□ 0.11
RIM1P32445 tP(UGG)N1tP(UGG)N1 72 nt15.71■□□□□ 0.11
RIM1P32445 tP(UGG)N2tP(UGG)N2 72 nt15.71■□□□□ 0.11
RIM1P32445 tP(UGG)O1tP(UGG)O1 72 nt15.71■□□□□ 0.11
RIM1P32445 SUF11tP(UGG)O2 72 nt15.71■□□□□ 0.11
RIM1P32445 CCC1YLR220W 969 nt15.6■□□□□ 0.09
RIM1P32445 YOL085CYOL085C 342 nt15.6■□□□□ 0.09
RIM1P32445 RPP1BYDL130W 321 nt15.45■□□□□ 0.06
RIM1P32445 RTC3YHR087W 336 nt15.43■□□□□ 0.06
RIM1P32445 PKP1YIL042C 1185 nt15.42■□□□□ 0.06
RIM1P32445 RVS167YDR388W 1449 nt15.21■□□□□ 0.03
RIM1P32445 SCJ1YMR214W 1134 nt15□□□□□ -0.01
RIM1P32445 tP(UGG)O3tP(UGG)O3 72 nt14.8□□□□□ -0.04
RIM1P32445 PET122YER153C 765 nt14.78□□□□□ -0.04
RIM1P32445 SCR1SCR1 522 nt14.61□□□□□ -0.07
RIM1P32445 SHR5YOL110W 714 nt14.59□□□□□ -0.07
RIM1P32445 ATS1YAL020C 1002 nt14.48□□□□□ -0.09
RIM1P32445 PUT4YOR348C 1884 nt14.39□□□□□ -0.11
RIM1P32445 RRN5YLR141W 1092 nt14.33□□□□□ -0.12
RIM1P32445 YDJ1YNL064C 1230 nt14.32□□□□□ -0.12
RIM1P32445 URN1YPR152C 1398 nt14.32□□□□□ -0.12
RIM1P32445 DEP1YAL013W 1218 nt14.26□□□□□ -0.13
RIM1P32445 OPI9YLR338W 858 nt14.13□□□□□ -0.15
RIM1P32445 RPN10YHR200W 807 nt14.11□□□□□ -0.15
RIM1P32445 SAH1YER043C 1350 nt14.1□□□□□ -0.15
RIM1P32445 ARE1YCR048W 1833 nt14.06□□□□□ -0.16
RIM1P32445 GAR1YHR089C 618 nt14.06□□□□□ -0.16
RIM1P32445 YER088W-BYER088W-B 147 nt14.04□□□□□ -0.16
RIM1P32445 YNL208WYNL208W 600 nt14.01□□□□□ -0.17
RIM1P32445 RSB1YOR049C 1065 nt14.01□□□□□ -0.17
RIM1P32445 POA1YBR022W 534 nt13.98□□□□□ -0.17
RIM1P32445 YHR049C-AYHR049C-A 297 nt13.95□□□□□ -0.18
RIM1P32445 SSA3YBL075C 1950 nt13.88□□□□□ -0.19
RIM1P32445 PUN1YLR414C 792 nt13.75□□□□□ -0.21
RIM1P32445 BSC6YOL137W 1494 nt13.71□□□□□ -0.21
RIM1P32445 BUD23YCR047C 828 nt13.65□□□□□ -0.22
RIM1P32445 YJR018WYJR018W 363 nt13.65□□□□□ -0.22
RIM1P32445 PTC2YER089C 1395 nt13.61□□□□□ -0.23
RIM1P32445 TIR1YER011W 765 nt13.58□□□□□ -0.24
RIM1P32445 NAB2YGL122C 1578 nt13.45□□□□□ -0.26
RIM1P32445 SSA1YAL005C 1929 nt13.43□□□□□ -0.26
RIM1P32445 PST2YDR032C 597 nt13.42□□□□□ -0.26
RIM1P32445 RPP2BYDR382W 333 nt13.36□□□□□ -0.27
RIM1P32445 YJR120WYJR120W 351 nt13.31□□□□□ -0.28
RIM1P32445 FPR4YLR449W 1179 nt13.26□□□□□ -0.29
RIM1P32445 DAL1YIR027C 1383 nt13.24□□□□□ -0.29
RIM1P32445 FIS1YIL065C 468 nt13.21□□□□□ -0.29
RIM1P32445 INM2YDR287W 879 nt13.2□□□□□ -0.3
RIM1P32445 PHO4YFR034C 939 nt13.12□□□□□ -0.31
RIM1P32445 SRB2YHR041C 633 nt13.11□□□□□ -0.31
RIM1P32445 SPT5YML010W 3192 nt13.06□□□□□ -0.32
RIM1P32445 YBL100CYBL100C 315 nt13.04□□□□□ -0.32
RIM1P32445 BDH2YAL061W 1254 nt13□□□□□ -0.33
RIM1P32445 WWM1YFL010C 636 nt12.94□□□□□ -0.34
RIM1P32445 SHU1YHL006C 453 nt12.94□□□□□ -0.34
RIM1P32445 YPS1YLR120C 1710 nt12.91□□□□□ -0.34
RIM1P32445 MEP2YNL142W 1500 nt12.88□□□□□ -0.35
RIM1P32445 FUN26YAL022C 1554 nt12.86□□□□□ -0.35
RIM1P32445 YGR021WYGR021W 873 nt12.84□□□□□ -0.35
RIM1P32445 YHR165W-AYHR165W-A 312 nt12.84□□□□□ -0.35
RIM1P32445 YKL097CYKL097C 411 nt12.84□□□□□ -0.35
RIM1P32445 YAL037C-BYAL037C-B 975 nt12.83□□□□□ -0.36
RIM1P32445 TRM9YML014W 840 nt12.83□□□□□ -0.36
RIM1P32445 YDR095CYDR095C 411 nt12.8□□□□□ -0.36
RIM1P32445 LSM3YLR438C-A 270 nt12.79□□□□□ -0.36
RIM1P32445 ALF1YNL148C 765 nt12.79□□□□□ -0.36
RIM1P32445 SSA4YER103W 1929 nt12.78□□□□□ -0.36
RIM1P32445 YFL021C-AYFL021C-A 855 nt12.75□□□□□ -0.37
RIM1P32445 HOM6YJR139C 1080 nt12.73□□□□□ -0.37
RIM1P32445 CCT6YDR188W 1641 nt12.66□□□□□ -0.38
RIM1P32445 MNP1YGL068W 585 nt12.65□□□□□ -0.38
RIM1P32445 DCW1YKL046C 1350 nt12.65□□□□□ -0.38
RIM1P32445 SUF2tP(AGG)C 72 nt12.63□□□□□ -0.39
RIM1P32445 SUF10tP(AGG)N 72 nt12.63□□□□□ -0.39
RIM1P32445 RPP2AYOL039W 321 nt12.59□□□□□ -0.39
RIM1P32445 RKM5YLR137W 1104 nt12.56□□□□□ -0.4
RIM1P32445 EMI2YDR516C 1503 nt12.52□□□□□ -0.41
RIM1P32445 YMR090WYMR090W 684 nt12.51□□□□□ -0.41
RIM1P32445 SIS1YNL007C 1059 nt12.51□□□□□ -0.41
RIM1P32445 PTP1YDL230W 1008 nt12.49□□□□□ -0.41
RIM1P32445 CAC2YML102W 1407 nt12.44□□□□□ -0.42
RIM1P32445 YDL221WYDL221W 552 nt12.41□□□□□ -0.42
RIM1P32445 YOL037CYOL037C 354 nt12.38□□□□□ -0.43
RIM1P32445 NPL3YDR432W 1245 nt12.34□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms