RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C ECM15P35195 104 aa9.09□□□□□ -0.95
YSR3YKR053C COG3P40094 801 aa9.09□□□□□ -0.95
YSR3YKR053C GCN20P43535 752 aaKnown RBP9.09□□□□□ -0.95
YSR3YKR053C MEP3P53390 489 aa9.09□□□□□ -0.95
YSR3YKR053C SYO1Q07395 620 aa9.09□□□□□ -0.95
YSR3YKR053C APC2Q12440 853 aa9.09□□□□□ -0.95
YSR3YKR053C YOL159C-AQ3E769 90 aa9.09□□□□□ -0.95
YSR3YKR053C ALP1P38971 573 aa9.08□□□□□ -0.96
YSR3YKR053C YJR098CP47139 656 aa9.08□□□□□ -0.96
YSR3YKR053C YKR011CQ02209 353 aa9.08□□□□□ -0.96
YSR3YKR053C PLB2Q03674 706 aa9.08□□□□□ -0.96
YSR3YKR053C SEC13Q04491 297 aaKnown RBP9.08□□□□□ -0.96
YSR3YKR053C UTP21Q06078 939 aaPredicted RBP9.08□□□□□ -0.96
YSR3YKR053C EMG1Q06287 252 aaKnown RBP9.08□□□□□ -0.96
YSR3YKR053C RDL2Q08742 149 aaKnown RBP9.08□□□□□ -0.96
YSR3YKR053C YPL225WQ08971 146 aaKnown RBP9.08□□□□□ -0.96
YSR3YKR053C RCN2Q12044 265 aa9.08□□□□□ -0.96
YSR3YKR053C RLM1Q12224 676 aa9.08□□□□□ -0.96
YSR3YKR053C HER1Q12276 1246 aa9.08□□□□□ -0.96
YSR3YKR053C REC107P21651 314 aa9.07□□□□□ -0.96
YSR3YKR053C MDH2P22133 377 aa9.07□□□□□ -0.96
YSR3YKR053C MAK32P23060 363 aa9.07□□□□□ -0.96
YSR3YKR053C SNC1P31109 117 aa9.07□□□□□ -0.96
YSR3YKR053C TIM12P32830 109 aa9.07□□□□□ -0.96
YSR3YKR053C SLC1P33333 303 aa9.07□□□□□ -0.96
YSR3YKR053C BUD9P53226 547 aa9.07□□□□□ -0.96
YSR3YKR053C NDL1Q06568 189 aa9.07□□□□□ -0.96
YSR3YKR053C IRC19Q07843 230 aa9.07□□□□□ -0.96
YSR3YKR053C RPL24AP04449 155 aaKnown RBP9.06□□□□□ -0.96
YSR3YKR053C CDC4P07834 779 aa9.06□□□□□ -0.96
YSR3YKR053C HSP30P25619 332 aa9.06□□□□□ -0.96
YSR3YKR053C HBS1P32769 611 aaKnown RBP9.06□□□□□ -0.96
YSR3YKR053C TRS65P32893 560 aa9.06□□□□□ -0.96
YSR3YKR053C MDL1P33310 695 aa9.06□□□□□ -0.96
YSR3YKR053C GPX1P36014 167 aa9.06□□□□□ -0.96
YSR3YKR053C RIX1P38883 763 aaPredicted RBP9.06□□□□□ -0.96
YSR3YKR053C SWD1P39706 426 aa9.06□□□□□ -0.96
YSR3YKR053C YIL166CP40445 542 aa9.06□□□□□ -0.96
YSR3YKR053C CAK1P43568 368 aaPredicted RBP9.06□□□□□ -0.96
YSR3YKR053C BAT2P47176 376 aaKnown RBP9.06□□□□□ -0.96
YSR3YKR053C SHE4P51534 789 aa9.06□□□□□ -0.96
YSR3YKR053C YGL235WP53071 178 aa9.06□□□□□ -0.96
YSR3YKR053C YGR168CP53293 376 aa9.06□□□□□ -0.96
YSR3YKR053C CRR1Q05790 422 aa9.06□□□□□ -0.96
YSR3YKR053C YPR127WQ06494 345 aa9.06□□□□□ -0.96
YSR3YKR053C SKI7Q08491 747 aaPredicted RBP9.06□□□□□ -0.96
YSR3YKR053C MCM1P11746 286 aa9.05□□□□□ -0.96
YSR3YKR053C APE2P32454 952 aaKnown RBP9.05□□□□□ -0.96
YSR3YKR053C MDJ1P35191 511 aa9.05□□□□□ -0.96
YSR3YKR053C JEN1P36035 616 aa9.05□□□□□ -0.96
YSR3YKR053C SPC34P36131 295 aa9.05□□□□□ -0.96
YSR3YKR053C SKN7P38889 622 aa9.05□□□□□ -0.96
YSR3YKR053C RMR1P53060 241 aa9.05□□□□□ -0.96
YSR3YKR053C RBG2P53295 368 aaKnown RBP9.05□□□□□ -0.96
YSR3YKR053C MPP6P53725 186 aaPredicted RBP9.05□□□□□ -0.96
YSR3YKR053C YNR040WP53736 256 aa9.05□□□□□ -0.96
YSR3YKR053C HMO1Q03973 246 aaKnown RBP9.05□□□□□ -0.96
YSR3YKR053C COQ10Q08058 207 aa9.05□□□□□ -0.96
YSR3YKR053C PEP4P07267 405 aaKnown RBP9.04□□□□□ -0.96
YSR3YKR053C HAP4P14064 554 aa9.04□□□□□ -0.96
YSR3YKR053C YPK2P18961 677 aa9.04□□□□□ -0.96
YSR3YKR053C NUP1P20676 1076 aa9.04□□□□□ -0.96
YSR3YKR053C RRP7P25368 297 aaPredicted RBP9.04□□□□□ -0.96
YSR3YKR053C RHB1P25378 209 aa9.04□□□□□ -0.96
YSR3YKR053C YCR100CP25606 316 aa9.04□□□□□ -0.96
YSR3YKR053C MSN4P33749 630 aa9.04□□□□□ -0.96
YSR3YKR053C CHK1P38147 527 aa9.04□□□□□ -0.96
YSR3YKR053C SRO77P38163 1010 aa9.04□□□□□ -0.96
YSR3YKR053C TOK1P40310 691 aa9.04□□□□□ -0.96
YSR3YKR053C VHR1P40522 640 aa9.04□□□□□ -0.96
YSR3YKR053C AGP3P43548 558 aa9.04□□□□□ -0.96
YSR3YKR053C NIT2P47016 307 aa9.04□□□□□ -0.96
YSR3YKR053C MSY1P48527 492 aa9.04□□□□□ -0.96
YSR3YKR053C MON1P53129 644 aa9.04□□□□□ -0.96
YSR3YKR053C YGR126WP53274 230 aa9.04□□□□□ -0.96
YSR3YKR053C VBA4Q04602 768 aaKnown RBP9.04□□□□□ -0.96
YSR3YKR053C SWA2Q06677 668 aa9.04□□□□□ -0.96
YSR3YKR053C NTG2Q08214 380 aa9.04□□□□□ -0.96
YSR3YKR053C YPL191CQ08930 360 aa9.04□□□□□ -0.96
YSR3YKR053C BTS1Q12051 335 aa9.04□□□□□ -0.96
YSR3YKR053C NFI1Q12216 726 aa9.04□□□□□ -0.96
YSR3YKR053C YPR015CQ12531 247 aa9.04□□□□□ -0.96
YSR3YKR053C SIR3P06701 978 aa9.03□□□□□ -0.96
YSR3YKR053C MET2P08465 486 aa9.03□□□□□ -0.96
YSR3YKR053C HMG1P12683 1054 aa9.03□□□□□ -0.96
YSR3YKR053C MRPL39P36533 70 aa9.03□□□□□ -0.96
YSR3YKR053C PTH1P38876 190 aaKnown RBP9.03□□□□□ -0.96
YSR3YKR053C RFC4P40339 323 aaKnown RBP9.03□□□□□ -0.96
YSR3YKR053C SCS7Q03529 384 aa9.03□□□□□ -0.96
YSR3YKR053C YOR343CQ12484 108 aa9.03□□□□□ -0.96
YSR3YKR053C SET6Q12529 373 aa9.03□□□□□ -0.96
YSR3YKR053C GLT1Q12680 2145 aaKnown RBP9.02□□□□□ -0.96
YSR3YKR053C YAL064W-BO13512 126 aa9.02□□□□□ -0.97
YSR3YKR053C YOL162WP0CF19 215 aa9.02□□□□□ -0.97
YSR3YKR053C YKL071WP36086 256 aa9.02□□□□□ -0.97
YSR3YKR053C IDS2P46958 469 aa9.02□□□□□ -0.97
YSR3YKR053C SNF12P53628 566 aa9.02□□□□□ -0.97
YSR3YKR053C YNR062CP53748 327 aa9.02□□□□□ -0.97
YSR3YKR053C MRPL1Q04599 285 aa9.02□□□□□ -0.97
YSR3YKR053C SNT309Q06091 175 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 118.4 ms