RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C BAP3P41815 604 aa2.96□□□□□ -1.94
RPN1YHR027C SSU1P41930 458 aa2.96□□□□□ -1.94
RPN1YHR027C LOH1P47055 219 aa2.96□□□□□ -1.94
RPN1YHR027C IBA57P47158 497 aa2.96□□□□□ -1.94
RPN1YHR027C ASN2P49090 572 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C MPC1P53157 130 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C YGR151CP53287 111 aa2.96□□□□□ -1.94
RPN1YHR027C MEP3P53390 489 aa2.96□□□□□ -1.94
RPN1YHR027C MPA43P53583 542 aaPredicted RBP2.96□□□□□ -1.94
RPN1YHR027C ARG5,6Q01217 863 aa2.96□□□□□ -1.94
RPN1YHR027C YPL080CQ02826 108 aa2.96□□□□□ -1.94
RPN1YHR027C YMR155WQ03795 547 aa2.96□□□□□ -1.94
RPN1YHR027C CTK1Q03957 528 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C LRS4Q04087 347 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C PPN1Q04119 674 aa2.96□□□□□ -1.94
RPN1YHR027C NAT4Q04751 285 aa2.96□□□□□ -1.94
RPN1YHR027C THI7Q05998 598 aa2.96□□□□□ -1.94
RPN1YHR027C INP54Q08227 384 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
RPN1YHR027C PSF1Q12488 208 aa2.96□□□□□ -1.94
RPN1YHR027C MHT1Q12525 324 aa2.96□□□□□ -1.94
RPN1YHR027C YMR030W-AQ3E760 96 aa2.96□□□□□ -1.94
RPN1YHR027C FRT1Q99332 602 aa2.96□□□□□ -1.94
RPN1YHR027C PDX1P16451 410 aa2.95□□□□□ -1.94
RPN1YHR027C ERD2P18414 219 aa2.95□□□□□ -1.94
RPN1YHR027C EPT1P22140 391 aa2.95□□□□□ -1.94
RPN1YHR027C PUP3P25451 205 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C YCR061WP25639 631 aa2.95□□□□□ -1.94
RPN1YHR027C SKT5P34226 696 aa2.95□□□□□ -1.94
RPN1YHR027C TCD2P36101 447 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C GMH1P36125 273 aa2.95□□□□□ -1.94
RPN1YHR027C RIB1P38066 345 aa2.95□□□□□ -1.94
RPN1YHR027C FLR1P38124 548 aa2.95□□□□□ -1.94
RPN1YHR027C SHE3P38272 425 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C AIM46P38885 310 aa2.95□□□□□ -1.94
RPN1YHR027C SUR2P38992 349 aa2.95□□□□□ -1.94
RPN1YHR027C HAT2P39984 401 aa2.95□□□□□ -1.94
RPN1YHR027C NPP2P39997 493 aa2.95□□□□□ -1.94
RPN1YHR027C BUR6P40096 142 aa2.95□□□□□ -1.94
RPN1YHR027C YER188WP40103 239 aa2.95□□□□□ -1.94
RPN1YHR027C MGS1P40151 587 aa2.95□□□□□ -1.94
RPN1YHR027C CAK1P43568 368 aaPredicted RBP2.95□□□□□ -1.94
RPN1YHR027C TAD2P47058 250 aa2.95□□□□□ -1.94
RPN1YHR027C YPR003CP53394 754 aa2.95□□□□□ -1.94
RPN1YHR027C RPA49Q01080 415 aaPredicted RBP2.95□□□□□ -1.94
RPN1YHR027C YML096WQ04489 525 aa2.95□□□□□ -1.94
RPN1YHR027C CDC123Q05791 360 aa2.95□□□□□ -1.94
RPN1YHR027C YLR413WQ06689 675 aa2.95□□□□□ -1.94
RPN1YHR027C GPM2Q12008 311 aa2.95□□□□□ -1.94
RPN1YHR027C CTF3Q12748 733 aa2.95□□□□□ -1.94
RPN1YHR027C YDL085C-AQ3E7B7 68 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C PET20Q99373 253 aa2.95□□□□□ -1.94
RPN1YHR027C HRP1Q99383 534 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C YLR358CO13565 187 aa2.95□□□□□ -1.94
RPN1YHR027C CIT1P00890 479 aa2.95□□□□□ -1.94
RPN1YHR027C CDC33P07260 213 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C SGA1P08019 549 aa2.95□□□□□ -1.94
RPN1YHR027C DDI2P0CH63 225 aa2.95□□□□□ -1.94
RPN1YHR027C DDI3P0CH64 225 aa2.95□□□□□ -1.94
RPN1YHR027C CYS3P31373 394 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C ARP2P32381 391 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C SNC2P33328 115 aa2.95□□□□□ -1.94
RPN1YHR027C DOA1P36037 715 aa2.95□□□□□ -1.94
RPN1YHR027C MRPL28P36527 147 aa2.95□□□□□ -1.94
RPN1YHR027C YBL029WP38201 376 aa2.95□□□□□ -1.94
RPN1YHR027C PFS1P38872 237 aa2.95□□□□□ -1.94
RPN1YHR027C GAT2P40209 560 aa2.95□□□□□ -1.94
RPN1YHR027C OPT1P40897 799 aa2.95□□□□□ -1.94
RPN1YHR027C GAB1P41733 394 aa2.95□□□□□ -1.94
RPN1YHR027C VMA21P41806 77 aa2.95□□□□□ -1.94
RPN1YHR027C NET1P47035 1189 aa2.95□□□□□ -1.94
RPN1YHR027C AZR1P50080 613 aa2.95□□□□□ -1.94
RPN1YHR027C KXD1P53158 218 aa2.95□□□□□ -1.94
RPN1YHR027C SLD5Q03406 294 aa2.95□□□□□ -1.94
RPN1YHR027C GAS3Q03655 524 aa2.95□□□□□ -1.94
RPN1YHR027C PLB2Q03674 706 aa2.95□□□□□ -1.94
RPN1YHR027C YMR130WQ04223 302 aa2.95□□□□□ -1.94
RPN1YHR027C RNH202Q05635 350 aa2.95□□□□□ -1.94
RPN1YHR027C SDO1Q07953 250 aaKnown RBP2.95□□□□□ -1.94
RPN1YHR027C BUD20Q08004 166 aaPredicted RBP2.95□□□□□ -1.94
RPN1YHR027C VAM3Q12241 283 aa2.95□□□□□ -1.94
RPN1YHR027C EAF3Q12432 401 aa2.95□□□□□ -1.94
RPN1YHR027C CBP1P07252 654 aa2.94□□□□□ -1.94
RPN1YHR027C NHP6AP11632 93 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C MAG1P22134 296 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C KIN82P25341 720 aa2.94□□□□□ -1.94
RPN1YHR027C PET18P25362 215 aa2.94□□□□□ -1.94
RPN1YHR027C SUA7P29055 345 aaPredicted RBP2.94□□□□□ -1.94
RPN1YHR027C SDH3P33421 198 aa2.94□□□□□ -1.94
RPN1YHR027C VPS52P39904 641 aa2.94□□□□□ -1.94
RPN1YHR027C PRE6P40303 254 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C PHO23P50947 330 aa2.94□□□□□ -1.94
RPN1YHR027C LCL3P53153 274 aa2.94□□□□□ -1.94
RPN1YHR027C COG7P53195 279 aa2.94□□□□□ -1.94
RPN1YHR027C NQM1P53228 333 aaPredicted RBP2.94□□□□□ -1.94
RPN1YHR027C CYT2Q00873 224 aa2.94□□□□□ -1.94
RPN1YHR027C UGO1Q03327 502 aa2.94□□□□□ -1.94
RPN1YHR027C YMR034CQ05131 434 aaPredicted RBP2.94□□□□□ -1.94
RPN1YHR027C TPO3Q06451 622 aa2.94□□□□□ -1.94
RPN1YHR027C ANT1Q06497 328 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms