RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C SPT20P50875 604 aa3.02□□□□□ -1.93
XRN1YGL173C YPT32P51996 222 aaKnown RBP3.02□□□□□ -1.93
XRN1YGL173C GET1P53192 235 aa3.02□□□□□ -1.93
XRN1YGL173C YPL068CQ02749 293 aa3.02□□□□□ -1.93
XRN1YGL173C ASA1Q06822 443 aa3.02□□□□□ -1.93
XRN1YGL173C SOR2Q07786 357 aa3.02□□□□□ -1.93
XRN1YGL173C GAS5Q08193 484 aa3.02□□□□□ -1.93
XRN1YGL173C YOP1Q12402 180 aa3.02□□□□□ -1.93
XRN1YGL173C RAD52P06778 471 aaKnown RBP3.01□□□□□ -1.93
XRN1YGL173C CHS1P08004 1131 aa3.01□□□□□ -1.93
XRN1YGL173C HEM1P09950 548 aaPredicted RBP3.01□□□□□ -1.93
XRN1YGL173C UNG1P12887 359 aa3.01□□□□□ -1.93
XRN1YGL173C YPS1P32329 569 aa3.01□□□□□ -1.93
XRN1YGL173C PAD1P33751 242 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
XRN1YGL173C CBP4P37267 147 aa3.01□□□□□ -1.93
XRN1YGL173C YPK3P38070 525 aa3.01□□□□□ -1.93
XRN1YGL173C KEG1P43614 200 aa3.01□□□□□ -1.93
XRN1YGL173C SOL4P53315 255 aa3.01□□□□□ -1.93
XRN1YGL173C NNT1Q05874 261 aa3.01□□□□□ -1.93
XRN1YGL173C ECM30Q06673 1274 aa3.01□□□□□ -1.93
XRN1YGL173C FSH3Q99369 266 aa3.01□□□□□ -1.93
XRN1YGL173C RPS13P05756 151 aaKnown RBP3.01□□□□□ -1.93
XRN1YGL173C ALP1P38971 573 aa3.01□□□□□ -1.93
XRN1YGL173C YGL242CP53066 181 aa3.01□□□□□ -1.93
XRN1YGL173C IPI3P53877 555 aa3.01□□□□□ -1.93
XRN1YGL173C ASI3P53983 676 aa3.01□□□□□ -1.93
XRN1YGL173C GIP3Q03016 1276 aa3.01□□□□□ -1.93
XRN1YGL173C YDR222WQ04925 415 aa3.01□□□□□ -1.93
XRN1YGL173C CLP1Q08685 445 aaPredicted RBP3.01□□□□□ -1.93
XRN1YGL173C QCR7P00128 127 aa3.01□□□□□ -1.93
XRN1YGL173C GAL4P04386 881 aa3.01□□□□□ -1.93
XRN1YGL173C PRB1P09232 635 aa3.01□□□□□ -1.93
XRN1YGL173C RNA15P25299 296 aaPredicted RBP3.01□□□□□ -1.93
XRN1YGL173C PUT3P25502 979 aaPredicted RBP3.01□□□□□ -1.93
XRN1YGL173C MRPL37P36532 105 aa3.01□□□□□ -1.93
XRN1YGL173C SFH5P47008 294 aa3.01□□□□□ -1.93
XRN1YGL173C RPS7BP48164 190 aaKnown RBP3.01□□□□□ -1.93
XRN1YGL173C PKP2P53170 491 aa3.01□□□□□ -1.93
XRN1YGL173C YNL181WP53878 407 aa3.01□□□□□ -1.93
XRN1YGL173C SAM50P53969 484 aa3.01□□□□□ -1.93
XRN1YGL173C NRT1Q08485 598 aa3.01□□□□□ -1.93
XRN1YGL173C MSH5Q12175 901 aa3.01□□□□□ -1.93
XRN1YGL173C FUN19P28003 413 aaPredicted RBP3□□□□□ -1.93
XRN1YGL173C RTC2P38279 296 aa3□□□□□ -1.93
XRN1YGL173C EFM1P38732 585 aa3□□□□□ -1.93
XRN1YGL173C CHS7P38843 316 aa3□□□□□ -1.93
XRN1YGL173C YFR020WP43600 232 aa3□□□□□ -1.93
XRN1YGL173C IBA57P47158 497 aa3□□□□□ -1.93
XRN1YGL173C BRR6P53062 197 aa3□□□□□ -1.93
XRN1YGL173C COX18P53239 316 aa3□□□□□ -1.93
XRN1YGL173C NOP13P53883 403 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
XRN1YGL173C YNL140CP53910 189 aa3□□□□□ -1.93
XRN1YGL173C SLD5Q03406 294 aa3□□□□□ -1.93
XRN1YGL173C APC9Q12107 265 aa3□□□□□ -1.93
XRN1YGL173C NSL1Q12143 216 aa3□□□□□ -1.93
XRN1YGL173C BCY1P07278 416 aaKnown RBP3□□□□□ -1.93
XRN1YGL173C NAM2P11325 894 aa3□□□□□ -1.93
XRN1YGL173C NHP6BP11633 99 aaKnown RBP3□□□□□ -1.93
XRN1YGL173C CWP1P28319 239 aa3□□□□□ -1.93
XRN1YGL173C LSM1P47017 172 aaKnown RBP3□□□□□ -1.93
XRN1YGL173C MCM22P47167 239 aa3□□□□□ -1.93
XRN1YGL173C LIF1P53150 421 aa3□□□□□ -1.93
XRN1YGL173C GIS1Q03833 894 aa3□□□□□ -1.93
XRN1YGL173C FAR10Q06001 478 aa3□□□□□ -1.93
XRN1YGL173C CTS2Q06350 511 aa3□□□□□ -1.93
XRN1YGL173C TDA6Q06466 467 aa3□□□□□ -1.93
XRN1YGL173C NDE2Q07500 545 aa3□□□□□ -1.93
XRN1YGL173C VIK1Q12045 647 aa3□□□□□ -1.93
XRN1YGL173C PER33Q12144 273 aa3□□□□□ -1.93
XRN1YGL173C YDR018CQ12185 396 aa3□□□□□ -1.93
XRN1YGL173C ORT1Q12375 292 aa3□□□□□ -1.93
XRN1YGL173C ALG7P07286 448 aa3□□□□□ -1.93
XRN1YGL173C IMA3P0CW40 589 aa3□□□□□ -1.93
XRN1YGL173C IMA4P0CW41 589 aa3□□□□□ -1.93
XRN1YGL173C CKI1P20485 582 aa3□□□□□ -1.93
XRN1YGL173C DBR1P24309 405 aaKnown RBP3□□□□□ -1.93
XRN1YGL173C MGT1P26188 188 aa3□□□□□ -1.93
XRN1YGL173C END3P39013 349 aa3□□□□□ -1.93
XRN1YGL173C MGA1P53050 456 aa3□□□□□ -1.93
XRN1YGL173C NUP49Q02199 472 aa3□□□□□ -1.93
XRN1YGL173C FUS2Q05670 677 aa3□□□□□ -1.93
XRN1YGL173C IMA2Q08295 589 aa3□□□□□ -1.93
XRN1YGL173C IRC13Q08630 104 aa3□□□□□ -1.93
XRN1YGL173C YPR117WQ06116 2489 aa3□□□□□ -1.93
XRN1YGL173C NUP1P20676 1076 aa3□□□□□ -1.93
XRN1YGL173C YCP4P25349 247 aaKnown RBP3□□□□□ -1.93
XRN1YGL173C MXR2P25566 168 aa3□□□□□ -1.93
XRN1YGL173C TIP1P27654 210 aaPredicted RBP3□□□□□ -1.93
XRN1YGL173C HOM6P31116 359 aaKnown RBP3□□□□□ -1.93
XRN1YGL173C FLO10P36170 1169 aa3□□□□□ -1.93
XRN1YGL173C MIX23P38162 196 aa3□□□□□ -1.93
XRN1YGL173C MST28P39552 234 aa3□□□□□ -1.93
XRN1YGL173C MDM36Q06820 579 aa3□□□□□ -1.93
XRN1YGL173C YOR114WQ12219 294 aa3□□□□□ -1.93
XRN1YGL173C NOT5Q12514 560 aaPredicted RBP3□□□□□ -1.93
XRN1YGL173C ADH2P00331 348 aaKnown RBP2.99□□□□□ -1.93
XRN1YGL173C URA6P15700 204 aa2.99□□□□□ -1.93
XRN1YGL173C AEP1P32493 518 aa2.99□□□□□ -1.93
XRN1YGL173C YBP1P38315 674 aa2.99□□□□□ -1.93
XRN1YGL173C DHH1P39517 506 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms