RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeast

Gene PRE2, Length 864 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE2	YPR103W	YLR152C	P54072	576 aa		4.6	□□□□□ -1.67
PRE2	YPR103W	PRO2	P54885	456 aa	Known RBP	4.6	□□□□□ -1.67
PRE2	YPR103W	SDS24	P38314	527 aa		4.59	□□□□□ -1.67
PRE2	YPR103W	YHC3	P47040	408 aa		4.59	□□□□□ -1.67
PRE2	YPR103W	HST1	P53685	503 aa		4.59	□□□□□ -1.67
PRE2	YPR103W	YET2	Q04210	160 aa		4.59	□□□□□ -1.67
PRE2	YPR103W	HTZ1	Q12692	134 aa	Known RBP	4.59	□□□□□ -1.67
PRE2	YPR103W	BUD4	P47136	1447 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	AAT2	P23542	418 aa	Known RBP	4.58	□□□□□ -1.68
PRE2	YPR103W	MXR2	P25566	168 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	MRPS5	P33759	307 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	ALP1	P38971	573 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	YER186C	P40101	306 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	YNL208W	P40159	199 aa	Known RBP	4.58	□□□□□ -1.68
PRE2	YPR103W	REX2	P54964	269 aa	Known RBP	4.58	□□□□□ -1.68
PRE2	YPR103W	RRB1	Q04225	511 aa	Known RBP	4.58	□□□□□ -1.68
PRE2	YPR103W	YMR027W	Q04371	470 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	SPH1	Q06160	661 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	YOL075C	Q08234	1294 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	REX3	Q12090	404 aa		4.58	□□□□□ -1.68
PRE2	YPR103W	THO2	P53552	1597 aa	Known RBP	4.57	□□□□□ -1.68
PRE2	YPR103W	PRR1	P28708	518 aa		4.57	□□□□□ -1.68
PRE2	YPR103W	POP2	P39008	433 aa		4.57	□□□□□ -1.68
PRE2	YPR103W	TRF5	P48561	642 aa	Known RBP	4.57	□□□□□ -1.68
PRE2	YPR103W	LST7	P53237	242 aa		4.57	□□□□□ -1.68
PRE2	YPR103W	SKI8	Q02793	397 aa	Predicted RBP	4.57	□□□□□ -1.68
PRE2	YPR103W	ARR1	Q06596	294 aa		4.57	□□□□□ -1.68
PRE2	YPR103W	RPS18A	P0CX55	146 aa	Known RBP	4.56	□□□□□ -1.68
PRE2	YPR103W	RPS18B	P0CX56	146 aa	Predicted RBP	4.56	□□□□□ -1.68
PRE2	YPR103W	UTR1	P21373	530 aa		4.56	□□□□□ -1.68
PRE2	YPR103W	NAT4	Q04751	285 aa		4.56	□□□□□ -1.68
PRE2	YPR103W	GLE1	Q12315	538 aa		4.56	□□□□□ -1.68
PRE2	YPR103W	IST2	P38250	946 aa		4.55	□□□□□ -1.68
PRE2	YPR103W	OM14	P38325	134 aa		4.55	□□□□□ -1.68
PRE2	YPR103W	SHE10	P53075	577 aa		4.55	□□□□□ -1.68
PRE2	YPR103W	STE23	Q06010	1027 aa		4.55	□□□□□ -1.68
PRE2	YPR103W	SLM3	Q12093	417 aa		4.55	□□□□□ -1.68
PRE2	YPR103W	SPO24	Q3E752	67 aa		4.55	□□□□□ -1.68
PRE2	YPR103W	MDS3	P53094	1487 aa		4.55	□□□□□ -1.68
PRE2	YPR103W	RAD1	P06777	1100 aa		4.54	□□□□□ -1.68
PRE2	YPR103W	SUR1	P33300	382 aa		4.54	□□□□□ -1.68
PRE2	YPR103W	SRB2	P34162	210 aa		4.54	□□□□□ -1.68
PRE2	YPR103W	TIM17	P39515	158 aa		4.54	□□□□□ -1.68
PRE2	YPR103W	YCH1	P42937	148 aa		4.54	□□□□□ -1.68
PRE2	YPR103W	TSA2	Q04120	196 aa		4.54	□□□□□ -1.68
PRE2	YPR103W	APC5	Q08683	685 aa		4.54	□□□□□ -1.68
PRE2	YPR103W	YDL109C	Q12103	647 aa		4.54	□□□□□ -1.68
PRE2	YPR103W	HEM4	P06174	275 aa		4.53	□□□□□ -1.68
PRE2	YPR103W	RPL23A	P0CX41	137 aa	Known RBP	4.53	□□□□□ -1.68
PRE2	YPR103W	RPL23B	P0CX42	137 aa	Known RBP	4.53	□□□□□ -1.68
PRE2	YPR103W	CDC50	P25656	391 aa		4.53	□□□□□ -1.68
PRE2	YPR103W	RPL16A	P26784	199 aa	Known RBP	4.53	□□□□□ -1.68
PRE2	YPR103W	YHR182W	P38870	785 aa		4.53	□□□□□ -1.68
PRE2	YPR103W	PFS1	P38872	237 aa		4.53	□□□□□ -1.68
PRE2	YPR103W	PRP39	P39682	629 aa	Known RBP	4.53	□□□□□ -1.68
PRE2	YPR103W	YMR134W	P40207	237 aa		4.53	□□□□□ -1.68
PRE2	YPR103W	YJR030C	P47101	745 aa		4.53	□□□□□ -1.68
PRE2	YPR103W	MSC3	Q05812	728 aa		4.53	□□□□□ -1.68
PRE2	YPR103W	LIP2	Q06005	328 aa		4.53	□□□□□ -1.68
PRE2	YPR103W	REV3	P14284	1504 aa		4.52	□□□□□ -1.69
PRE2	YPR103W	MKK1	P32490	508 aa		4.52	□□□□□ -1.69
PRE2	YPR103W	PEX32	P38292	413 aa		4.52	□□□□□ -1.69
PRE2	YPR103W	YPT35	P38815	214 aa	Known RBP	4.52	□□□□□ -1.69
PRE2	YPR103W	LSM12	P38828	187 aa	Known RBP	4.52	□□□□□ -1.69
PRE2	YPR103W	PGU1	P47180	361 aa		4.52	□□□□□ -1.69
PRE2	YPR103W	YGL114W	P53134	725 aa		4.52	□□□□□ -1.69
PRE2	YPR103W	VAC7	P53950	1165 aa		4.52	□□□□□ -1.69
PRE2	YPR103W	CSM3	Q04659	317 aa		4.52	□□□□□ -1.69
PRE2	YPR103W	PRB1	P09232	635 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	PCL1	P24867	279 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	GIT1	P25346	518 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	CIN8	P27895	1000 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	SEH1	P53011	349 aa	Known RBP	4.51	□□□□□ -1.69
PRE2	YPR103W	YNL146W	P53906	100 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	ABZ2	Q03266	374 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	VPS20	Q04272	221 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	MGR3	Q04472	501 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	ATP16	Q12165	160 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	UBA3	Q99344	299 aa		4.51	□□□□□ -1.69
PRE2	YPR103W	HIR3	P47171	1648 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	RPS14A	P06367	137 aa	Known RBP	4.5	□□□□□ -1.69
PRE2	YPR103W	YLL053C	P0CD98	152 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	GAL3	P13045	520 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	ARF2	P19146	181 aa	Known RBP	4.5	□□□□□ -1.69
PRE2	YPR103W	PMT2	P31382	759 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	YKR015C	P36111	568 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	RPS14B	P39516	138 aa	Known RBP	4.5	□□□□□ -1.69
PRE2	YPR103W	RBG1	P39729	369 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	ALD5	P40047	520 aa	Known RBP	4.5	□□□□□ -1.69
PRE2	YPR103W	DFG10	P40526	253 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	AIP1	P46680	615 aa	Known RBP	4.5	□□□□□ -1.69
PRE2	YPR103W	NAS6	P50086	228 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	YGL039W	P53183	348 aa	Known RBP	4.5	□□□□□ -1.69
PRE2	YPR103W	PRP38	Q00723	242 aa	Predicted RBP	4.5	□□□□□ -1.69
PRE2	YPR103W	SFM1	Q12314	213 aa		4.5	□□□□□ -1.69
PRE2	YPR103W	STF1	P01098	86 aa		4.49	□□□□□ -1.69
PRE2	YPR103W	ZRC1	P20107	442 aa		4.49	□□□□□ -1.69
PRE2	YPR103W	UTH1	P36135	365 aa		4.49	□□□□□ -1.69
PRE2	YPR103W	OSW5	P40219	148 aa		4.49	□□□□□ -1.69
PRE2	YPR103W	LSG1	P53145	640 aa	Known RBP	4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms