RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C DNL4Q08387 944 aaPredicted RBP1.15□□□□□ -2.23
SEC3YER008C SPS4P09937 338 aa1.14□□□□□ -2.23
SEC3YER008C FUS3P16892 353 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C SPO12P17123 173 aa1.14□□□□□ -2.23
SEC3YER008C YSR3P23501 404 aa1.14□□□□□ -2.23
SEC3YER008C TMT1P32643 299 aa1.14□□□□□ -2.23
SEC3YER008C COS9P36034 407 aa1.14□□□□□ -2.23
SEC3YER008C MTC6P38849 526 aa1.14□□□□□ -2.23
SEC3YER008C VPS52P39904 641 aa1.14□□□□□ -2.23
SEC3YER008C YIL169CP40442 995 aa1.14□□□□□ -2.23
SEC3YER008C MSS2P40990 351 aa1.14□□□□□ -2.23
SEC3YER008C TFG2P41896 400 aaPredicted RBP1.14□□□□□ -2.23
SEC3YER008C TDA10P42938 290 aa1.14□□□□□ -2.23
SEC3YER008C YNL181WP53878 407 aa1.14□□□□□ -2.23
SEC3YER008C CRZ1P53968 678 aa1.14□□□□□ -2.23
SEC3YER008C PNG1Q02890 363 aa1.14□□□□□ -2.23
SEC3YER008C CAC2Q04199 468 aa1.14□□□□□ -2.23
SEC3YER008C NAT4Q04751 285 aa1.14□□□□□ -2.23
SEC3YER008C RKM1Q08961 583 aaPredicted RBP1.14□□□□□ -2.23
SEC3YER008C ATG31Q12421 196 aa1.14□□□□□ -2.23
SEC3YER008C SAM1P10659 382 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C RPB4P20433 221 aaPredicted RBP1.14□□□□□ -2.23
SEC3YER008C CYM1P32898 989 aa1.14□□□□□ -2.23
SEC3YER008C ARC19P33204 171 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C CBF5P33322 483 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
SEC3YER008C SPT10P35208 640 aa1.14□□□□□ -2.23
SEC3YER008C ATP3P38077 311 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C YHR182WP38870 785 aa1.14□□□□□ -2.23
SEC3YER008C UIP3P39547 235 aa1.14□□□□□ -2.23
SEC3YER008C YER085CP40058 173 aa1.14□□□□□ -2.23
SEC3YER008C RPN11P43588 306 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C FAR3P46671 204 aa1.14□□□□□ -2.23
SEC3YER008C CTK3P46963 296 aaPredicted RBP1.14□□□□□ -2.23
SEC3YER008C HIT1P46973 164 aa1.14□□□□□ -2.23
SEC3YER008C HMS2P47175 358 aa1.14□□□□□ -2.23
SEC3YER008C AZR1P50080 613 aa1.14□□□□□ -2.23
SEC3YER008C TDA7P53882 636 aaPredicted RBP1.14□□□□□ -2.23
SEC3YER008C NOP13P53883 403 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
SEC3YER008C MRP51Q02950 344 aa1.14□□□□□ -2.23
SEC3YER008C MSS11Q03825 758 aa1.14□□□□□ -2.23
SEC3YER008C NDL1Q06568 189 aa1.14□□□□□ -2.23
SEC3YER008C SMC5Q08204 1093 aa1.14□□□□□ -2.23
SEC3YER008C YOR365CQ08844 703 aa1.14□□□□□ -2.23
SEC3YER008C UBA3Q99344 299 aa1.14□□□□□ -2.23
SEC3YER008C CSF1Q12150 2958 aa1.14□□□□□ -2.23
SEC3YER008C SCEIP03882 235 aa1.14□□□□□ -2.23
SEC3YER008C CBF1P17106 351 aa1.14□□□□□ -2.23
SEC3YER008C OSM1P21375 501 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C APE2P32454 952 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C SKN1P33336 771 aa1.14□□□□□ -2.23
SEC3YER008C MIC12P38341 106 aa1.14□□□□□ -2.23
SEC3YER008C RTC3P38804 111 aaPredicted RBP1.14□□□□□ -2.23
SEC3YER008C PEX18P38855 283 aa1.14□□□□□ -2.23
SEC3YER008C RCY1P39531 840 aa1.14□□□□□ -2.23
SEC3YER008C YER130CP39959 443 aa1.14□□□□□ -2.23
SEC3YER008C ATM1P40416 690 aa1.14□□□□□ -2.23
SEC3YER008C YCH1P42937 148 aa1.14□□□□□ -2.23
SEC3YER008C SCD6P45978 349 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23 RIP-Chip
SEC3YER008C HSH155P49955 971 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C SPP2Q02521 185 aa1.14□□□□□ -2.23
SEC3YER008C NUP100Q02629 959 aa1.14□□□□□ -2.23
SEC3YER008C YDR541CQ03049 344 aa1.14□□□□□ -2.23
SEC3YER008C CWC21Q03375 135 aaKnown RBP1.14□□□□□ -2.23
SEC3YER008C RSN1Q03516 953 aa1.14□□□□□ -2.23
SEC3YER008C OST6Q03723 332 aa1.14□□□□□ -2.23
SEC3YER008C ATC1Q04005 294 aa1.14□□□□□ -2.23
SEC3YER008C FMP42Q04991 504 aa1.14□□□□□ -2.23
SEC3YER008C BOP2Q06150 570 aa1.14□□□□□ -2.23
SEC3YER008C PIG1Q06216 648 aa1.14□□□□□ -2.23
SEC3YER008C MUM3Q08750 479 aa1.14□□□□□ -2.23
SEC3YER008C TMS1Q12116 473 aa1.14□□□□□ -2.23
SEC3YER008C YPR1Q12458 312 aa1.14□□□□□ -2.23
SEC3YER008C RVS161P25343 265 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C YCR016WP25617 290 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C NDI1P32340 513 aa1.13□□□□□ -2.23
SEC3YER008C SHP1P34223 423 aa1.13□□□□□ -2.23
SEC3YER008C YBL028CP38202 106 aa1.13□□□□□ -2.23
SEC3YER008C COA1P40452 197 aa1.13□□□□□ -2.23
SEC3YER008C WWM1P43582 211 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C LIA1P47120 325 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C YGL260WP53056 76 aa1.13□□□□□ -2.23
SEC3YER008C RMR1P53060 241 aa1.13□□□□□ -2.23
SEC3YER008C VOA1P53262 265 aa1.13□□□□□ -2.23
SEC3YER008C SSQ1Q05931 657 aaPredicted RBP1.13□□□□□ -2.23
SEC3YER008C REX4Q08237 289 aa1.13□□□□□ -2.23
SEC3YER008C YLR111WQ12528 110 aa1.13□□□□□ -2.23
SEC3YER008C SUC2P00724 532 aa1.13□□□□□ -2.23
SEC3YER008C RAD7P06779 565 aa1.13□□□□□ -2.23
SEC3YER008C MSF1P08425 469 aa1.13□□□□□ -2.23
SEC3YER008C SSC1P0CS90 654 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C RPL12AP0CX53 165 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C RPL12BP0CX54 165 aa1.13□□□□□ -2.23
SEC3YER008C KGD2P19262 463 aaPredicted RBP1.13□□□□□ -2.23
SEC3YER008C TYR1P20049 452 aa1.13□□□□□ -2.23
SEC3YER008C RAD57P25301 460 aa1.13□□□□□ -2.23
SEC3YER008C POP5P28005 173 aa1.13□□□□□ -2.23
SEC3YER008C MSK1P32048 576 aa1.13□□□□□ -2.23
SEC3YER008C BMH2P34730 273 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C LAG1P38703 411 aa1.13□□□□□ -2.23
SEC3YER008C PRM9P39551 298 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms