RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	MOB2	P43563	287 aa		3.77	□□□□□ -1.81
RPN6	YDL097C	RIM8	P53179	542 aa		3.77	□□□□□ -1.81
RPN6	YDL097C	TPC1	P53257	314 aa		3.77	□□□□□ -1.81
RPN6	YDL097C	COQ11	Q05892	277 aa		3.77	□□□□□ -1.81
RPN6	YDL097C	STP4	Q07351	490 aa		3.77	□□□□□ -1.81
RPN6	YDL097C	YPL245W	Q12179	454 aa	Known RBP	3.77	□□□□□ -1.81
RPN6	YDL097C	STE7	P06784	515 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	RPL35A	P0CX84	120 aa	Known RBP	3.76	□□□□□ -1.81
RPN6	YDL097C	RPL35B	P0CX85	120 aa	Known RBP	3.76	□□□□□ -1.81
RPN6	YDL097C	PRP4	P20053	465 aa	Known RBP	3.76	□□□□□ -1.81
RPN6	YDL097C	FIG1	P38224	298 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	SIC1	P38634	284 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	YER034W	P40022	185 aa	Known RBP	3.76	□□□□□ -1.81
RPN6	YDL097C	YIL001W	P40560	513 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	PUS4	P48567	403 aa	Known RBP	3.76	□□□□□ -1.81
RPN6	YDL097C	BOL2	P53082	120 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	BUD32	P53323	261 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	GTR1	Q00582	310 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	ARG5,6	Q01217	863 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	SMA2	Q04658	369 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	YLR287C	Q05881	355 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	ARR1	Q06596	294 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	GPB1	Q08886	897 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	FRE8	Q12209	686 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	AVL9	Q12500	764 aa		3.76	□□□□□ -1.81
RPN6	YDL097C	ADE5,7	P07244	802 aa	Known RBP	3.75	□□□□□ -1.81
RPN6	YDL097C	ADH4	P10127	382 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	FRS1	P15624	595 aa	Known RBP	3.75	□□□□□ -1.81
RPN6	YDL097C	UTR1	P21373	530 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	RPN12	P32496	274 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	MNS1	P32906	549 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	SSP120	P39931	234 aa	Known RBP	3.75	□□□□□ -1.81
RPN6	YDL097C	YFL012W	P43580	148 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	CHA4	P43634	648 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	DPB11	P47027	764 aa	Predicted RBP	3.75	□□□□□ -1.81
RPN6	YDL097C	TAX4	P47030	604 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	MAD3	P47074	515 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	UPF3	P48412	387 aa	Known RBP	3.75	□□□□□ -1.81
RPN6	YDL097C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
RPN6	YDL097C	GOT1	Q03554	138 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	UTP21	Q06078	939 aa	Predicted RBP	3.75	□□□□□ -1.81
RPN6	YDL097C	CRN1	Q06440	651 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	NDL1	Q06568	189 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	RAD34	Q06665	692 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	MCM21	Q06675	368 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	CRT10	Q08226	957 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	FCY22	Q12119	530 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	NPC2	Q12408	173 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	SET6	Q12529	373 aa		3.75	□□□□□ -1.81
RPN6	YDL097C	TY2A-LR1	P0C2J4	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-F	P0CX61	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-GR2	P0CX62	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	ART10	P18634	518 aa	Known RBP	3.74	□□□□□ -1.81
RPN6	YDL097C	KGD1	P20967	1014 aa	Known RBP	3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-C	P25383	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	HCS1	P34243	683 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	SHM2	P37291	469 aa	Known RBP	3.74	□□□□□ -1.81
RPN6	YDL097C	PSD1	P39006	500 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	YJL193W	P39542	402 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	SWD1	P39706	426 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	ECM1	P39715	212 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	SCC4	P40090	624 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	YNL195C	P40168	261 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	BUD8	P41698	603 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	TAF4	P50105	388 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	MSC1	Q03104	513 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	VPS60	Q03390	229 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-DR2	Q03483	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	YMR317W	Q04893	1140 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	RXT3	Q07458	294 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	ETT1	Q08421	412 aa	Known RBP	3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-B	Q12260	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-OR2	Q12293	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-DR1	Q12392	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-OR1	Q12439	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	TY2A-DR3	Q99303	438 aa		3.74	□□□□□ -1.81
RPN6	YDL097C	SRB4	P32569	687 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	LTV1	P34078	463 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	MET18	P40469	1032 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	IMA5	P40884	581 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	PEF1	P53238	335 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	YPL039W	Q03080	316 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	NRG1	Q03125	231 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	YAP6	Q03935	383 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	HMO1	Q03973	246 aa	Known RBP	3.73	□□□□□ -1.81
RPN6	YDL097C	BUD22	Q04347	519 aa	Known RBP	3.73	□□□□□ -1.81
RPN6	YDL097C	VBA4	Q04602	768 aa	Known RBP	3.73	□□□□□ -1.81
RPN6	YDL097C	VPS36	Q06696	566 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	NOP12	Q08208	459 aa	Known RBP	3.73	□□□□□ -1.81
RPN6	YDL097C	SRL1	Q08673	210 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	FMP40	Q08968	688 aa	Predicted RBP	3.73	□□□□□ -1.81
RPN6	YDL097C	RNH203	Q12338	110 aa		3.73	□□□□□ -1.81
RPN6	YDL097C	ILV5	P06168	395 aa	Known RBP	3.72	□□□□□ -1.81
RPN6	YDL097C	URA7	P28274	579 aa	Known RBP	3.72	□□□□□ -1.81
RPN6	YDL097C	URA10	P30402	227 aa		3.72	□□□□□ -1.81
RPN6	YDL097C	MCM10	P32354	571 aa		3.72	□□□□□ -1.81
RPN6	YDL097C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
RPN6	YDL097C	CLG1	P35190	452 aa		3.72	□□□□□ -1.81
RPN6	YDL097C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
RPN6	YDL097C	MED8	P38304	223 aa		3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 171 ms