RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C LYS12P40495 371 aaKnown RBP5.31□□□□□ -1.56
SEC18YBR080C BUL1P48524 976 aa5.31□□□□□ -1.56
SEC18YBR080C NBP1P52919 319 aaPredicted RBP5.31□□□□□ -1.56
SEC18YBR080C ZRG17P53735 605 aa5.31□□□□□ -1.56
SEC18YBR080C PRM15Q03262 622 aa5.31□□□□□ -1.56
SEC18YBR080C VBA1Q04301 562 aa5.31□□□□□ -1.56
SEC18YBR080C PLM2Q04383 521 aa5.31□□□□□ -1.56
SEC18YBR080C AI3P03877 415 aa5.3□□□□□ -1.56
SEC18YBR080C TKL1P23254 680 aaKnown RBP5.3□□□□□ -1.56
SEC18YBR080C CLB2P24869 491 aa5.3□□□□□ -1.56
SEC18YBR080C IES6P32617 166 aa5.3□□□□□ -1.56
SEC18YBR080C FIG1P38224 298 aa5.3□□□□□ -1.56
SEC18YBR080C RCK2P38623 610 aa5.3□□□□□ -1.56
SEC18YBR080C YCH1P42937 148 aa5.3□□□□□ -1.56
SEC18YBR080C RTT101P47050 842 aa5.3□□□□□ -1.56
SEC18YBR080C SEH1P53011 349 aaKnown RBP5.3□□□□□ -1.56
SEC18YBR080C MRPL50P53724 139 aa5.3□□□□□ -1.56
SEC18YBR080C YEH2Q07950 538 aa5.3□□□□□ -1.56
SEC18YBR080C FRE7Q12333 620 aa5.3□□□□□ -1.56
SEC18YBR080C RKM5Q12367 367 aa5.3□□□□□ -1.56
SEC18YBR080C UFD4P33202 1483 aa5.3□□□□□ -1.56
SEC18YBR080C MES1P00958 751 aaKnown RBP5.3□□□□□ -1.56
SEC18YBR080C RAD57P25301 460 aa5.3□□□□□ -1.56
SEC18YBR080C YJR056CP47115 236 aa5.3□□□□□ -1.56
SEC18YBR080C YJR154WP47181 346 aa5.3□□□□□ -1.56
SEC18YBR080C MSS11Q03825 758 aa5.3□□□□□ -1.56
SEC18YBR080C DLT1Q04216 342 aa5.3□□□□□ -1.56
SEC18YBR080C ASA1Q06822 443 aa5.3□□□□□ -1.56
SEC18YBR080C LDS2Q08218 356 aa5.3□□□□□ -1.56
SEC18YBR080C YKL033W-AQ86ZR7 236 aa5.3□□□□□ -1.56
SEC18YBR080C YOR338WQ99326 363 aa5.3□□□□□ -1.56
SEC18YBR080C SAL1D6W196 494 aa5.29□□□□□ -1.56
SEC18YBR080C PGK1P00560 416 aaKnown RBP5.29□□□□□ -1.56
SEC18YBR080C FUN19P28003 413 aaPredicted RBP5.29□□□□□ -1.56
SEC18YBR080C REC114P32841 428 aa5.29□□□□□ -1.56
SEC18YBR080C MRPL6P32904 214 aa5.29□□□□□ -1.56
SEC18YBR080C GPI15P53961 229 aa5.29□□□□□ -1.56
SEC18YBR080C PRP38Q00723 242 aaPredicted RBP5.29□□□□□ -1.56
SEC18YBR080C SNU56Q03782 492 aaKnown RBP5.29□□□□□ -1.56
SEC18YBR080C RVB1Q03940 463 aaKnown RBP5.29□□□□□ -1.56
SEC18YBR080C RAD34Q06665 692 aa5.29□□□□□ -1.56
SEC18YBR080C IRC13Q08630 104 aa5.29□□□□□ -1.56
SEC18YBR080C RKI1Q12189 258 aa5.29□□□□□ -1.56
SEC18YBR080C SPP41P38904 1435 aa5.29□□□□□ -1.56
SEC18YBR080C HPR1P17629 752 aaKnown RBP5.28□□□□□ -1.56
SEC18YBR080C TYR1P20049 452 aa5.28□□□□□ -1.56
SEC18YBR080C TMT1P32643 299 aa5.28□□□□□ -1.56
SEC18YBR080C IKI1P38874 309 aa5.28□□□□□ -1.56
SEC18YBR080C RPH1P39956 796 aa5.28□□□□□ -1.56
SEC18YBR080C GET1P53192 235 aa5.28□□□□□ -1.56
SEC18YBR080C GND2P53319 492 aa5.28□□□□□ -1.56
SEC18YBR080C ROT1Q03691 256 aa5.28□□□□□ -1.56
SEC18YBR080C DXO1Q06349 442 aa5.28□□□□□ -1.56
SEC18YBR080C ARO10Q06408 635 aa5.28□□□□□ -1.56
SEC18YBR080C YER145C-AA0A023PYF4 145 aa5.28□□□□□ -1.56
SEC18YBR080C PAB1P04147 577 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SEC18YBR080C ASP3-2P0CX77 362 aa5.28□□□□□ -1.56
SEC18YBR080C ASP3-3P0CX78 362 aa5.28□□□□□ -1.56
SEC18YBR080C ASP3-4P0CX79 362 aa5.28□□□□□ -1.56
SEC18YBR080C ASP3-1P0CZ17 362 aa5.28□□□□□ -1.56
SEC18YBR080C RNR3P21672 869 aaKnown RBP5.28□□□□□ -1.56
SEC18YBR080C PPZ2P33329 710 aa5.28□□□□□ -1.56
SEC18YBR080C IST2P38250 946 aa5.28□□□□□ -1.56
SEC18YBR080C SHO1P40073 367 aa5.28□□□□□ -1.56
SEC18YBR080C AIM24P47127 394 aa5.28□□□□□ -1.56
SEC18YBR080C MUP1P50276 574 aa5.28□□□□□ -1.56
SEC18YBR080C NMA2P53204 395 aa5.28□□□□□ -1.56
SEC18YBR080C YPR147CQ06522 304 aaKnown RBP5.28□□□□□ -1.56
SEC18YBR080C NDE2Q07500 545 aa5.28□□□□□ -1.56
SEC18YBR080C YDL086WQ07505 273 aa5.28□□□□□ -1.56
SEC18YBR080C RPP0P05317 312 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C WHI2P12611 486 aa5.27□□□□□ -1.57
SEC18YBR080C RPS2P25443 254 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C YCR102CP25608 368 aa5.27□□□□□ -1.57
SEC18YBR080C SKN1P33336 771 aa5.27□□□□□ -1.57
SEC18YBR080C PRX1P34227 261 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C RIB5P38145 238 aa5.27□□□□□ -1.57
SEC18YBR080C BMT2P38278 337 aa5.27□□□□□ -1.57
SEC18YBR080C SMB1P40018 196 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C COX16P47081 118 aa5.27□□□□□ -1.57
SEC18YBR080C SPC24Q04477 213 aa5.27□□□□□ -1.57
SEC18YBR080C YLR346CQ06139 101 aa5.27□□□□□ -1.57
SEC18YBR080C BER1Q06688 274 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C DST1P07273 309 aa5.27□□□□□ -1.57
SEC18YBR080C HEM15P16622 393 aa5.27□□□□□ -1.57
SEC18YBR080C SAT4P25333 603 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C POP5P28005 173 aa5.27□□□□□ -1.57
SEC18YBR080C EHD3P28817 500 aa5.27□□□□□ -1.57
SEC18YBR080C VMA5P31412 392 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C ECM15P35195 104 aa5.27□□□□□ -1.57
SEC18YBR080C HMT1P38074 348 aa5.27□□□□□ -1.57
SEC18YBR080C MGA1P53050 456 aa5.27□□□□□ -1.57
SEC18YBR080C YGR151CP53287 111 aa5.27□□□□□ -1.57
SEC18YBR080C VAC7P53950 1165 aa5.27□□□□□ -1.57
SEC18YBR080C YDR387CQ04162 555 aa5.27□□□□□ -1.57
SEC18YBR080C TMN2Q04562 672 aa5.27□□□□□ -1.57
SEC18YBR080C PBP4Q07362 185 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C APC9Q12107 265 aa5.27□□□□□ -1.57
SEC18YBR080C TMS1Q12116 473 aa5.27□□□□□ -1.57
SEC18YBR080C USV1Q12132 391 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms