RNA–Protein interactions for RNA: snR65

snR65, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR65, Length 100 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR65	snR65	RGM1	Q00453	211 aa		0.85	□□□□□ -2.27
snR65	snR65	SNT309	Q06091	175 aa	Predicted RBP	0.85	□□□□□ -2.27
snR65	snR65	IMA2	Q08295	589 aa		0.85	□□□□□ -2.27
snR65	snR65	YOR376W	Q08900	122 aa		0.85	□□□□□ -2.27
snR65	snR65	RKM1	Q08961	583 aa	Predicted RBP	0.85	□□□□□ -2.27
snR65	snR65	HSP42	Q12329	375 aa		0.85	□□□□□ -2.27
snR65	snR65	RPS23A	P0CX29	145 aa	Known RBP	0.84	□□□□□ -2.27
snR65	snR65	RPS23B	P0CX30	145 aa		0.84	□□□□□ -2.27
snR65	snR65	GEX1	P25596	615 aa		0.84	□□□□□ -2.27
snR65	snR65	TOA1	P32773	286 aa		0.84	□□□□□ -2.27
snR65	snR65	DBP7	P36120	742 aa	Known RBP	0.84	□□□□□ -2.27
snR65	snR65	FUI1	P38196	639 aa		0.84	□□□□□ -2.27
snR65	snR65	ATG12	P38316	186 aa		0.84	□□□□□ -2.27
snR65	snR65	SPO22	P40511	975 aa		0.84	□□□□□ -2.27
snR65	snR65	FMS1	P50264	508 aa		0.84	□□□□□ -2.27
snR65	snR65	RRP46	P53256	223 aa	Predicted RBP	0.84	□□□□□ -2.27
snR65	snR65	PRP38	Q00723	242 aa	Predicted RBP	0.84	□□□□□ -2.27
snR65	snR65	MIX17	Q03667	156 aa		0.84	□□□□□ -2.27
snR65	snR65	URH1	Q04179	340 aa		0.84	□□□□□ -2.27
snR65	snR65	VAM3	Q12241	283 aa		0.84	□□□□□ -2.27
snR65	snR65	SNF6	P18888	332 aa		0.83	□□□□□ -2.28
snR65	snR65	PWP2	P25635	923 aa	Known RBP	0.83	□□□□□ -2.28
snR65	snR65	DBF4	P32325	704 aa		0.83	□□□□□ -2.28
snR65	snR65	RAD5	P32849	1169 aa	Predicted RBP	0.83	□□□□□ -2.28
snR65	snR65	MET18	P40469	1032 aa		0.83	□□□□□ -2.28
snR65	snR65	JJJ1	P53863	590 aa		0.83	□□□□□ -2.28
snR65	snR65	ASA1	Q06822	443 aa		0.83	□□□□□ -2.28
snR65	snR65	SSH4	P32343	579 aa		0.82	□□□□□ -2.28
snR65	snR65	ALK2	P32789	676 aa	Predicted RBP	0.82	□□□□□ -2.28
snR65	snR65	RRN10	P38204	145 aa		0.82	□□□□□ -2.28
snR65	snR65	MMS4	P38257	691 aa		0.82	□□□□□ -2.28
snR65	snR65	HEM14	P40012	539 aa		0.82	□□□□□ -2.28
snR65	snR65	MNP1	P53163	194 aa	Predicted RBP	0.82	□□□□□ -2.28
snR65	snR65	STD1	Q02794	444 aa		0.82	□□□□□ -2.28
snR65	snR65	LDS2	Q08218	356 aa		0.82	□□□□□ -2.28
snR65	snR65	LDB17	Q12342	491 aa		0.82	□□□□□ -2.28
snR65	snR65	TKL2	P33315	681 aa		0.81	□□□□□ -2.28
snR65	snR65	LSM12	P38828	187 aa	Known RBP	0.81	□□□□□ -2.28
snR65	snR65	KEG1	P43614	200 aa		0.81	□□□□□ -2.28
snR65	snR65	MSC3	Q05812	728 aa		0.81	□□□□□ -2.28
snR65	snR65	VTA1	Q06263	330 aa		0.81	□□□□□ -2.28
snR65	snR65	YDR056C	Q12025	205 aa		0.81	□□□□□ -2.28
snR65	snR65	BUG1	Q12191	341 aa		0.81	□□□□□ -2.28
snR65	snR65	YAL067W-A	Q8TGK6	75 aa		0.81	□□□□□ -2.28
snR65	snR65	POM152	P39685	1337 aa		0.81	□□□□□ -2.28
snR65	snR65	SSC1	P0CS90	654 aa	Known RBP	0.8	□□□□□ -2.28
snR65	snR65	YBR241C	P38142	488 aa		0.8	□□□□□ -2.28
snR65	snR65	RMI1	Q02685	241 aa		0.8	□□□□□ -2.28
snR65	snR65	MMT1	Q03218	510 aa		0.8	□□□□□ -2.28
snR65	snR65	FLO11	P08640	1367 aa		0.8	□□□□□ -2.28
snR65	snR65	CKA2	P19454	339 aa		0.79	□□□□□ -2.28
snR65	snR65	SPS19	P32573	292 aa	Known RBP	0.79	□□□□□ -2.28
snR65	snR65	YBL081W	P38180	368 aa	Known RBP	0.79	□□□□□ -2.28
snR65	snR65	OTU2	P38747	307 aa	Known RBP	0.79	□□□□□ -2.28
snR65	snR65	BIO3	P50277	480 aa		0.79	□□□□□ -2.28
snR65	snR65	VAC7	P53950	1165 aa		0.79	□□□□□ -2.28
snR65	snR65	REX2	P54964	269 aa	Known RBP	0.79	□□□□□ -2.28
snR65	snR65	FRE8	Q12209	686 aa		0.79	□□□□□ -2.28
snR65	snR65	SKT5	P34226	696 aa		0.78	□□□□□ -2.28
snR65	snR65	COS5	P47187	383 aa		0.78	□□□□□ -2.28
snR65	snR65	SPR6	Q01684	191 aa		0.78	□□□□□ -2.28
snR65	snR65	RRP45	Q05636	305 aa	Known RBP	0.78	□□□□□ -2.28
snR65	snR65	COG4	Q06096	861 aa		0.78	□□□□□ -2.28
snR65	snR65	COS7	Q07788	383 aa		0.78	□□□□□ -2.28
snR65	snR65	ATP1	P07251	545 aa	Known RBP	0.77	□□□□□ -2.29
snR65	snR65	RPS18A	P0CX55	146 aa	Known RBP	0.77	□□□□□ -2.29
snR65	snR65	RPS18B	P0CX56	146 aa	Predicted RBP	0.77	□□□□□ -2.29
snR65	snR65	TRX2	P22803	104 aa	Known RBP	0.77	□□□□□ -2.29
snR65	snR65	YGL088W	P53151	121 aa		0.77	□□□□□ -2.29
snR65	snR65	RNH201	P53942	307 aa		0.77	□□□□□ -2.29
snR65	snR65	MRX11	Q03079	207 aa		0.77	□□□□□ -2.29
snR65	snR65	YMR155W	Q03795	547 aa		0.77	□□□□□ -2.29
snR65	snR65	VTI1	Q04338	217 aa		0.77	□□□□□ -2.29
snR65	snR65	DIS3	Q08162	1001 aa	Known RBP	0.77	□□□□□ -2.29
snR65	snR65	YDL211C	Q12121	372 aa		0.77	□□□□□ -2.29
snR65	snR65	SFM1	Q12314	213 aa		0.77	□□□□□ -2.29
snR65	snR65	HMS1	Q12398	434 aa		0.77	□□□□□ -2.29
snR65	snR65	ARG3	P05150	338 aa		0.76	□□□□□ -2.29
snR65	snR65	SRV2	P17555	526 aa	Known RBP	0.76	□□□□□ -2.29
snR65	snR65	MIG1	P27705	504 aa		0.76	□□□□□ -2.29
snR65	snR65	SPO23	P33757	523 aa		0.76	□□□□□ -2.29
snR65	snR65	NTC20	P38302	140 aa	Predicted RBP	0.76	□□□□□ -2.29
snR65	snR65	GPI16	P38875	610 aa		0.76	□□□□□ -2.29
snR65	snR65	SMF1	P38925	575 aa		0.76	□□□□□ -2.29
snR65	snR65	TRF5	P48561	642 aa	Known RBP	0.76	□□□□□ -2.29
snR65	snR65	RPA49	Q01080	415 aa	Predicted RBP	0.76	□□□□□ -2.29
snR65	snR65	PLB3	Q08108	686 aa		0.76	□□□□□ -2.29
snR65	snR65	PCL9	Q12477	304 aa		0.76	□□□□□ -2.29
snR65	snR65	ALG1	P16661	449 aa		0.75	□□□□□ -2.29
snR65	snR65	ANP1	P32629	500 aa		0.75	□□□□□ -2.29
snR65	snR65	SHE3	P38272	425 aa	Known RBP	0.75	□□□□□ -2.29
snR65	snR65	VID27	P40157	782 aa		0.75	□□□□□ -2.29
snR65	snR65	VHS2	P40463	436 aa		0.75	□□□□□ -2.29
snR65	snR65	UFE1	P41834	346 aa		0.75	□□□□□ -2.29
snR65	snR65	CTK3	P46963	296 aa	Predicted RBP	0.75	□□□□□ -2.29
snR65	snR65	YGL138C	P53122	345 aa		0.75	□□□□□ -2.29
snR65	snR65	CDD1	Q06549	142 aa		0.75	□□□□□ -2.29
snR65	snR65	ADE4	P04046	510 aa	Known RBP	0.74	□□□□□ -2.29
snR65	snR65	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.74	□□□□□ -2.29	not detected
snR65	snR65	NIP1	P32497	812 aa	Known RBP	0.74	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms