RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 HTZ1Q12692 134 aaKnown RBP1.41□□□□□ -2.18
snR56snR56 YOR338WQ99326 363 aa1.41□□□□□ -2.18
snR56snR56 HOM3P10869 527 aa1.4□□□□□ -2.19
snR56snR56 SAG1P20840 650 aa1.4□□□□□ -2.19
snR56snR56 TOA1P32773 286 aa1.4□□□□□ -2.19
snR56snR56 ATG12P38316 186 aa1.4□□□□□ -2.19
snR56snR56 LSM12P38828 187 aaKnown RBP1.4□□□□□ -2.19
snR56snR56 YLR177WQ06251 628 aa1.4□□□□□ -2.19
snR56snR56 RPL3P14126 387 aaKnown RBP1.39□□□□□ -2.19
snR56snR56 EPT1P22140 391 aa1.39□□□□□ -2.19
snR56snR56 SSH4P32343 579 aa1.39□□□□□ -2.19
snR56snR56 NBP1P52919 319 aaPredicted RBP1.39□□□□□ -2.19
snR56snR56 PRP38Q00723 242 aaPredicted RBP1.39□□□□□ -2.19
snR56snR56 VTA1Q06263 330 aa1.39□□□□□ -2.19
snR56snR56 PHO84P25297 587 aaKnown RBP1.38□□□□□ -2.19
snR56snR56 MKK1P32490 508 aa1.38□□□□□ -2.19
snR56snR56 NIP1P32497 812 aaKnown RBP1.38□□□□□ -2.19
snR56snR56 RAD5P32849 1169 aaPredicted RBP1.38□□□□□ -2.19
snR56snR56 RRN10P38204 145 aa1.38□□□□□ -2.19
snR56snR56 MMS4P38257 691 aa1.38□□□□□ -2.19
snR56snR56 LDS2Q08218 356 aa1.38□□□□□ -2.19
snR56snR56 YOR376WQ08900 122 aa1.38□□□□□ -2.19
snR56snR56 SRO7Q12038 1033 aa1.38□□□□□ -2.19
snR56snR56 BUG1Q12191 341 aa1.38□□□□□ -2.19
snR56snR56 DBP7P36120 742 aaKnown RBP1.37□□□□□ -2.19
snR56snR56 RRT13P40042 185 aa1.37□□□□□ -2.19
snR56snR56 VAC7P53950 1165 aa1.37□□□□□ -2.19
snR56snR56 STD1Q02794 444 aa1.37□□□□□ -2.19
snR56snR56 YDR056CQ12025 205 aa1.37□□□□□ -2.19
snR56snR56 ALK2P32789 676 aaPredicted RBP1.36□□□□□ -2.19
snR56snR56 SKG6P32900 734 aaPredicted RBP1.36□□□□□ -2.19
snR56snR56 RRP46P53256 223 aaPredicted RBP1.36□□□□□ -2.19
snR56snR56 LDB17Q12342 491 aa1.36□□□□□ -2.19
snR56snR56 SSC1P0CS90 654 aaKnown RBP1.35□□□□□ -2.19
snR56snR56 RPS23AP0CX29 145 aaKnown RBP1.35□□□□□ -2.19
snR56snR56 RPS23BP0CX30 145 aa1.35□□□□□ -2.19
snR56snR56 DBF4P32325 704 aa1.35□□□□□ -2.19
snR56snR56 HEM14P40012 539 aa1.35□□□□□ -2.19
snR56snR56 RGM1Q00453 211 aa1.35□□□□□ -2.19
snR56snR56 VTI1Q04338 217 aa1.35□□□□□ -2.19
snR56snR56 MSC3Q05812 728 aa1.35□□□□□ -2.19
snR56snR56 CKA2P19454 339 aa1.34□□□□□ -2.19
snR56snR56 ECM8P38246 354 aa1.34□□□□□ -2.19
snR56snR56 OTU2P38747 307 aaKnown RBP1.34□□□□□ -2.19
snR56snR56 COS5P47187 383 aa1.34□□□□□ -2.19
snR56snR56 BIO3P50277 480 aa1.34□□□□□ -2.19
snR56snR56 MNP1P53163 194 aaPredicted RBP1.34□□□□□ -2.19
snR56snR56 MMT1Q03218 510 aa1.34□□□□□ -2.19
snR56snR56 ASA1Q06822 443 aa1.34□□□□□ -2.19
snR56snR56 COS7Q07788 383 aa1.34□□□□□ -2.19
snR56snR56 POM152P39685 1337 aa1.34□□□□□ -2.2
snR56snR56 TKL2P33315 681 aa1.33□□□□□ -2.2
snR56snR56 RPA49Q01080 415 aaPredicted RBP1.33□□□□□ -2.2
snR56snR56 RRP45Q05636 305 aaKnown RBP1.33□□□□□ -2.2
snR56snR56 COG4Q06096 861 aa1.33□□□□□ -2.2
snR56snR56 GRX6Q12438 231 aa1.33□□□□□ -2.2
snR56snR56 YAL067W-AQ8TGK6 75 aa1.33□□□□□ -2.2
snR56snR56 SNF6P18888 332 aa1.32□□□□□ -2.2
snR56snR56 SMF1P38925 575 aa1.32□□□□□ -2.2
snR56snR56 RMI1Q02685 241 aa1.32□□□□□ -2.2
snR56snR56 MIX17Q03667 156 aa1.32□□□□□ -2.2
snR56snR56 SFM1Q12314 213 aa1.32□□□□□ -2.2
snR56snR56 PAB1P04147 577 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
snR56snR56 TRX2P22803 104 aaKnown RBP1.31□□□□□ -2.2
snR56snR56 SPO23P33757 523 aa1.31□□□□□ -2.2
snR56snR56 SHE3P38272 425 aaKnown RBP1.31□□□□□ -2.2
snR56snR56 REX2P54964 269 aaKnown RBP1.31□□□□□ -2.2
snR56snR56 HIF1Q12373 385 aa1.31□□□□□ -2.2
snR56snR56 ARG3P05150 338 aa1.3□□□□□ -2.2
snR56snR56 SPS19P32573 292 aaKnown RBP1.3□□□□□ -2.2
snR56snR56 SKT5P34226 696 aa1.3□□□□□ -2.2
snR56snR56 ADE4P04046 510 aaKnown RBP1.29□□□□□ -2.2
snR56snR56 RPS18AP0CX55 146 aaKnown RBP1.29□□□□□ -2.2
snR56snR56 RPS18BP0CX56 146 aaPredicted RBP1.29□□□□□ -2.2
snR56snR56 ALG1P16661 449 aa1.29□□□□□ -2.2
snR56snR56 ANP1P32629 500 aa1.29□□□□□ -2.2
snR56snR56 UFE1P41834 346 aa1.29□□□□□ -2.2
snR56snR56 ASN2P49090 572 aaKnown RBP1.29□□□□□ -2.2
snR56snR56 RNH201P53942 307 aa1.29□□□□□ -2.2
snR56snR56 FRE8Q12209 686 aa1.29□□□□□ -2.2
snR56snR56 PCL9Q12477 304 aa1.29□□□□□ -2.2
snR56snR56 ATP1P07251 545 aaKnown RBP1.28□□□□□ -2.2
snR56snR56 CHA1P25379 360 aaKnown RBP1.28□□□□□ -2.2
snR56snR56 RAD23P32628 398 aaKnown RBP1.28□□□□□ -2.2
snR56snR56 NTC20P38302 140 aaPredicted RBP1.28□□□□□ -2.2
snR56snR56 VID27P40157 782 aa1.28□□□□□ -2.2
snR56snR56 TRF5P48561 642 aaKnown RBP1.28□□□□□ -2.2
snR56snR56 YGL088WP53151 121 aa1.28□□□□□ -2.2
snR56snR56 YGR117CP53270 476 aa1.28□□□□□ -2.2
snR56snR56 SPR6Q01684 191 aa1.28□□□□□ -2.2
snR56snR56 MIG1P27705 504 aa1.27□□□□□ -2.21
snR56snR56 YBR241CP38142 488 aa1.27□□□□□ -2.21
snR56snR56 GPX2P38143 162 aa1.27□□□□□ -2.21
snR56snR56 YBL081WP38180 368 aaKnown RBP1.27□□□□□ -2.21
snR56snR56 CTK3P46963 296 aaPredicted RBP1.27□□□□□ -2.21
snR56snR56 YGL138CP53122 345 aa1.27□□□□□ -2.21
snR56snR56 IMH1Q06704 911 aaKnown RBP1.27□□□□□ -2.21
snR56snR56 PLB3Q08108 686 aa1.27□□□□□ -2.21
snR56snR56 DIS3Q08162 1001 aaKnown RBP1.27□□□□□ -2.21
snR56snR56 HMS1Q12398 434 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms