RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C CSE2P33308 149 aa2.47□□□□□ -2.01
SHE4YOR035C YGL039WP53183 348 aaKnown RBP2.47□□□□□ -2.01
SHE4YOR035C SHY1P53266 389 aa2.47□□□□□ -2.01
SHE4YOR035C PRP42Q03776 544 aaKnown RBP2.47□□□□□ -2.01
SHE4YOR035C RAX1Q08760 435 aa2.47□□□□□ -2.01
SHE4YOR035C NCA2Q12374 616 aa2.47□□□□□ -2.01
SHE4YOR035C TY1B-DR3Q99231 1755 aa2.47□□□□□ -2.01
SHE4YOR035C LTV1P34078 463 aa2.47□□□□□ -2.01
SHE4YOR035C MMF1P40185 145 aaKnown RBP2.47□□□□□ -2.01
SHE4YOR035C SIM1P40472 476 aa2.47□□□□□ -2.01
SHE4YOR035C TIS11P47977 285 aa2.47□□□□□ -2.01
SHE4YOR035C BRO1P48582 844 aa2.47□□□□□ -2.01
SHE4YOR035C ADA2Q02336 434 aa2.47□□□□□ -2.01
SHE4YOR035C YMR027WQ04371 470 aa2.47□□□□□ -2.01
SHE4YOR035C HSP104P31539 908 aaKnown RBP2.46□□□□□ -2.01
SHE4YOR035C INM1P38710 295 aa2.46□□□□□ -2.01
SHE4YOR035C YJR085CP47131 105 aaKnown RBP2.46□□□□□ -2.01
SHE4YOR035C YML6P51998 286 aa2.46□□□□□ -2.01
SHE4YOR035C YLR152CP54072 576 aa2.46□□□□□ -2.01
SHE4YOR035C UAF30Q08747 228 aa2.46□□□□□ -2.01
SHE4YOR035C SNT2P53127 1403 aa2.46□□□□□ -2.02
SHE4YOR035C SPR1P32603 445 aa2.46□□□□□ -2.02
SHE4YOR035C STP2P38704 541 aa2.46□□□□□ -2.02
SHE4YOR035C STN1P38960 494 aa2.46□□□□□ -2.02
SHE4YOR035C CHS6P40955 746 aa2.46□□□□□ -2.02
SHE4YOR035C MRM2P53123 320 aa2.46□□□□□ -2.02
SHE4YOR035C ALF1P53904 254 aa2.46□□□□□ -2.02
SHE4YOR035C IZH2Q12442 317 aa2.46□□□□□ -2.02
SHE4YOR035C CEX1Q12453 761 aa2.46□□□□□ -2.02
SHE4YOR035C ULS1Q08562 1619 aa2.46□□□□□ -2.02
SHE4YOR035C EXG1P23776 448 aaKnown RBP2.45□□□□□ -2.02
SHE4YOR035C SKN1P33336 771 aa2.45□□□□□ -2.02
SHE4YOR035C YKL097CP34245 136 aa2.45□□□□□ -2.02
SHE4YOR035C TOS3P43637 560 aa2.45□□□□□ -2.02
SHE4YOR035C RRP46P53256 223 aaPredicted RBP2.45□□□□□ -2.02
SHE4YOR035C MDM36Q06820 579 aa2.45□□□□□ -2.02
SHE4YOR035C AHC1Q12433 566 aa2.45□□□□□ -2.02
SHE4YOR035C CAP2P13517 287 aa2.45□□□□□ -2.02
SHE4YOR035C AIM10P39965 576 aaKnown RBP2.45□□□□□ -2.02
SHE4YOR035C LCB2P40970 561 aa2.45□□□□□ -2.02
SHE4YOR035C BUD27P43573 796 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SHE4YOR035C YJL055WP47044 245 aa2.45□□□□□ -2.02
SHE4YOR035C EAF3Q12432 401 aa2.45□□□□□ -2.02
SHE4YOR035C ERP4Q12450 207 aa2.45□□□□□ -2.02
SHE4YOR035C ATP1P07251 545 aaKnown RBP2.44□□□□□ -2.02
SHE4YOR035C ALG1P16661 449 aa2.44□□□□□ -2.02
SHE4YOR035C PHA2P32452 334 aa2.44□□□□□ -2.02
SHE4YOR035C COX13P32799 129 aa2.44□□□□□ -2.02
SHE4YOR035C GPI16P38875 610 aa2.44□□□□□ -2.02
SHE4YOR035C POM152P39685 1337 aa2.44□□□□□ -2.02
SHE4YOR035C MSI1P13712 422 aa2.44□□□□□ -2.02
SHE4YOR035C SLM5P25345 492 aaKnown RBP2.44□□□□□ -2.02
SHE4YOR035C PHO91P27514 894 aa2.44□□□□□ -2.02
SHE4YOR035C DPH5P32469 300 aaPredicted RBP2.44□□□□□ -2.02
SHE4YOR035C YFR057WP43625 151 aa2.44□□□□□ -2.02
SHE4YOR035C LCB3P47013 409 aa2.44□□□□□ -2.02
SHE4YOR035C ROG1P53118 685 aa2.44□□□□□ -2.02
SHE4YOR035C RSC1P53236 928 aa2.44□□□□□ -2.02
SHE4YOR035C SXM1Q04175 944 aaKnown RBP2.44□□□□□ -2.02
SHE4YOR035C YDR341CQ05506 607 aaKnown RBP2.44□□□□□ -2.02
SHE4YOR035C SPE3Q12074 293 aaKnown RBP2.44□□□□□ -2.02
SHE4YOR035C SMF3Q12078 473 aaPredicted RBP2.44□□□□□ -2.02
SHE4YOR035C NRP1P32770 719 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
SHE4YOR035C MAM33P40513 266 aa2.43□□□□□ -2.02
SHE4YOR035C HAC1P41546 238 aa2.43□□□□□ -2.02
SHE4YOR035C GAB1P41733 394 aa2.43□□□□□ -2.02
SHE4YOR035C BIR1P47134 954 aa2.43□□□□□ -2.02
SHE4YOR035C SPR6Q01684 191 aa2.43□□□□□ -2.02
SHE4YOR035C RIF2Q06208 395 aa2.43□□□□□ -2.02
SHE4YOR035C CUE5Q08412 411 aaKnown RBP2.43□□□□□ -2.02
SHE4YOR035C YGK3Q12222 375 aaPredicted RBP2.43□□□□□ -2.02
SHE4YOR035C JID1Q12350 301 aa2.43□□□□□ -2.02
SHE4YOR035C TOP2P06786 1428 aaKnown RBP2.43□□□□□ -2.02
SHE4YOR035C PCL1P24867 279 aa2.43□□□□□ -2.02
SHE4YOR035C HXT1P32465 570 aa2.43□□□□□ -2.02
SHE4YOR035C NUP2P32499 720 aa2.43□□□□□ -2.02
SHE4YOR035C UTP18P40362 594 aaPredicted RBP2.43□□□□□ -2.02
SHE4YOR035C HAL1Q01766 294 aa2.43□□□□□ -2.02
SHE4YOR035C YMR102CQ03177 834 aa2.43□□□□□ -2.02
SHE4YOR035C NSE1Q07913 336 aa2.43□□□□□ -2.02
SHE4YOR035C SMC5Q08204 1093 aa2.43□□□□□ -2.02
SHE4YOR035C PLP2Q12017 286 aa2.43□□□□□ -2.02
SHE4YOR035C OPI3P05375 206 aa2.42□□□□□ -2.02
SHE4YOR035C UTH1P36135 365 aa2.42□□□□□ -2.02
SHE4YOR035C QDR3P38227 689 aa2.42□□□□□ -2.02
SHE4YOR035C MIG3P39943 394 aa2.42□□□□□ -2.02
SHE4YOR035C EFM4P40516 257 aa2.42□□□□□ -2.02
SHE4YOR035C AIM24P47127 394 aa2.42□□□□□ -2.02
SHE4YOR035C RTN1Q04947 295 aaKnown RBP2.42□□□□□ -2.02
SHE4YOR035C RPN5Q12250 445 aaKnown RBP2.42□□□□□ -2.02
SHE4YOR035C TY3B-GQ99315 1547 aa2.42□□□□□ -2.02
SHE4YOR035C PIS1P06197 220 aaKnown RBP2.42□□□□□ -2.02
SHE4YOR035C MNE1P24720 663 aa2.42□□□□□ -2.02
SHE4YOR035C YEF1P32622 495 aa2.42□□□□□ -2.02
SHE4YOR035C RTC2P38279 296 aa2.42□□□□□ -2.02
SHE4YOR035C YGR117CP53270 476 aa2.42□□□□□ -2.02
SHE4YOR035C PRM6Q04705 352 aa2.42□□□□□ -2.02
SHE4YOR035C LIP2Q06005 328 aa2.42□□□□□ -2.02
SHE4YOR035C PAR32Q12515 295 aaKnown RBP2.42□□□□□ -2.02
SHE4YOR035C MYO4P32492 1471 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 61.9 ms