RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	HTZ1	Q12692	134 aa	Known RBP	3.02	□□□□□ -1.93
VMA7	YGR020C	SMC6	Q12749	1114 aa		3.02	□□□□□ -1.93
VMA7	YGR020C	YCR024C-B	Q3E7Z8	88 aa		3.02	□□□□□ -1.93
VMA7	YGR020C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	RIP-Chip
VMA7	YGR020C	RAD5	P32849	1169 aa	Predicted RBP	3.01	□□□□□ -1.93
VMA7	YGR020C	SKT5	P34226	696 aa		3.01	□□□□□ -1.93
VMA7	YGR020C	SRP72	P38688	640 aa	Known RBP	3.01	□□□□□ -1.93
VMA7	YGR020C	YER186C	P40101	306 aa		3.01	□□□□□ -1.93
VMA7	YGR020C	STE24	P47154	453 aa		3.01	□□□□□ -1.93
VMA7	YGR020C	YPR091C	Q06833	770 aa		3.01	□□□□□ -1.93
VMA7	YGR020C	MFG1	Q07684	458 aa		3.01	□□□□□ -1.93
VMA7	YGR020C	GPM3	Q12326	303 aa		3.01	□□□□□ -1.93
VMA7	YGR020C	PSK1	P31374	1356 aa		3	□□□□□ -1.93
VMA7	YGR020C	COX4	P04037	155 aa		3	□□□□□ -1.93
VMA7	YGR020C	PDE2	P06776	526 aa		3	□□□□□ -1.93
VMA7	YGR020C	SLM5	P25345	492 aa	Known RBP	3	□□□□□ -1.93
VMA7	YGR020C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
VMA7	YGR020C	ATM1	P40416	690 aa		3	□□□□□ -1.93
VMA7	YGR020C	MRPS16	Q02608	121 aa		3	□□□□□ -1.93
VMA7	YGR020C	VHS1	Q03785	461 aa		3	□□□□□ -1.93
VMA7	YGR020C	RNH203	Q12338	110 aa		3	□□□□□ -1.93
VMA7	YGR020C	OPI3	P05375	206 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	PHO91	P27514	894 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	QDR3	P38227	689 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
VMA7	YGR020C	ROG1	P53118	685 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	MKC7	P53379	596 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	ECM7	Q06200	448 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	YDL114W	Q07530	308 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	DNL4	Q08387	944 aa	Predicted RBP	2.99	□□□□□ -1.93
VMA7	YGR020C	FCY22	Q12119	530 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	YOP1	Q12402	180 aa		2.99	□□□□□ -1.93
VMA7	YGR020C	RPL12A	P0CX53	165 aa	Known RBP	2.98	□□□□□ -1.93
VMA7	YGR020C	RPL12B	P0CX54	165 aa		2.98	□□□□□ -1.93
VMA7	YGR020C	MPE1	P35728	441 aa	Known RBP	2.98	□□□□□ -1.93
VMA7	YGR020C	DOA1	P36037	715 aa		2.98	□□□□□ -1.93
VMA7	YGR020C	MCR1	P36060	302 aa	Known RBP	2.98	□□□□□ -1.93
VMA7	YGR020C	TOS2	P50078	622 aa		2.98	□□□□□ -1.93
VMA7	YGR020C	TRM112	P53738	135 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA7	YGR020C	CIK1	Q01649	594 aa		2.98	□□□□□ -1.93
VMA7	YGR020C	SKI8	Q02793	397 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA7	YGR020C	PRP3	Q03338	469 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA7	YGR020C	TPK3	P05986	398 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	PRB1	P09232	635 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	ARF1	P11076	181 aa	Known RBP	2.97	□□□□□ -1.93
VMA7	YGR020C	ZRC1	P20107	442 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	VMA8	P32610	256 aa	Known RBP	2.97	□□□□□ -1.93
VMA7	YGR020C	YSC83	P32792	385 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	GPX2	P38143	162 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	GPI18	P38211	433 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	ECM8	P38246	354 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	SEO1	P39709	593 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	PAC11	P40960	533 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	GYL1	Q04322	720 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	YBL111C	Q3E7Y5	667 aa		2.97	□□□□□ -1.93
VMA7	YGR020C	FUN26	P31381	517 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	TIR2	P33890	251 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	MRPS9	P38120	278 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	GEP4	P38812	185 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	PFS1	P38872	237 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	TIM17	P39515	158 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	YML6	P51998	286 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	PMT5	P52867	743 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	YPS5	P53057	165 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	RRN9	P53437	365 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	URC2	Q04411	772 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	YPQ1	Q12010	308 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	SPE3	Q12074	293 aa	Known RBP	2.96	□□□□□ -1.94
VMA7	YGR020C	YDL199C	Q12407	687 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	PCL9	Q12477	304 aa		2.96	□□□□□ -1.94
VMA7	YGR020C	CBP6	P07253	162 aa	Predicted RBP	2.95	□□□□□ -1.94
VMA7	YGR020C	PXA2	P34230	853 aa		2.95	□□□□□ -1.94
VMA7	YGR020C	ALD5	P40047	520 aa	Known RBP	2.95	□□□□□ -1.94
VMA7	YGR020C	IGD1	P43598	195 aa		2.95	□□□□□ -1.94
VMA7	YGR020C	AIP1	P46680	615 aa	Known RBP	2.95	□□□□□ -1.94
VMA7	YGR020C	RNY1	Q02933	434 aa	Known RBP	2.95	□□□□□ -1.94
VMA7	YGR020C	YDR541C	Q03049	344 aa		2.95	□□□□□ -1.94
VMA7	YGR020C	ECM11	Q04110	302 aa		2.95	□□□□□ -1.94
VMA7	YGR020C	NDL1	Q06568	189 aa		2.95	□□□□□ -1.94
VMA7	YGR020C	ASA1	Q06822	443 aa		2.95	□□□□□ -1.94
VMA7	YGR020C	FOL3	Q12676	427 aa	Predicted RBP	2.95	□□□□□ -1.94
VMA7	YGR020C	DEP1	P31385	405 aa		2.94	□□□□□ -1.94
VMA7	YGR020C	PGU1	P47180	361 aa		2.94	□□□□□ -1.94
VMA7	YGR020C	YGL262W	P53054	175 aa		2.94	□□□□□ -1.94
VMA7	YGR020C	APJ1	P53940	528 aa		2.94	□□□□□ -1.94
VMA7	YGR020C	KTR6	P54070	446 aa		2.94	□□□□□ -1.94
VMA7	YGR020C	RPN5	Q12250	445 aa	Known RBP	2.94	□□□□□ -1.94
VMA7	YGR020C	ADH1	P00330	348 aa	Known RBP	2.93	□□□□□ -1.94
VMA7	YGR020C	TOA2	P32774	122 aa		2.93	□□□□□ -1.94
VMA7	YGR020C	SPO23	P33757	523 aa		2.93	□□□□□ -1.94
VMA7	YGR020C	YGR018C	P53211	109 aa		2.93	□□□□□ -1.94
VMA7	YGR020C	RTT102	P53330	157 aa		2.93	□□□□□ -1.94
VMA7	YGR020C	MEH1	Q02205	184 aa		2.93	□□□□□ -1.94
VMA7	YGR020C	LDS2	Q08218	356 aa		2.93	□□□□□ -1.94
VMA7	YGR020C	MEX67	Q99257	599 aa	Known RBP	2.93	□□□□□ -1.94
VMA7	YGR020C	RPL1A	P0CX43	217 aa	Known RBP	2.92	□□□□□ -1.94
VMA7	YGR020C	RPL1B	P0CX44	217 aa	Known RBP	2.92	□□□□□ -1.94
VMA7	YGR020C	TPS1	Q00764	495 aa	Known RBP	2.92	□□□□□ -1.94
VMA7	YGR020C	STE7	P06784	515 aa		2.91	□□□□□ -1.94
VMA7	YGR020C	RPS18A	P0CX55	146 aa	Known RBP	2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms