RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA7, Length 357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA7YGR020C MTC1P47018 478 aaKnown RBP14.34□□□□□ -0.11
VMA7YGR020C DRS1P32892 752 aaKnown RBP13.96□□□□□ -0.17
VMA7YGR020C FAP1P53971 965 aa12.58□□□□□ -0.4
VMA7YGR020C DIP2Q12220 943 aaPredicted RBP12□□□□□ -0.49
VMA7YGR020C PRI1P10363 409 aa11.93□□□□□ -0.5
VMA7YGR020C BFR2Q06631 534 aaKnown RBP11.93□□□□□ -0.5
VMA7YGR020C AAD16Q02895 342 aa11.83□□□□□ -0.52
VMA7YGR020C ISW2Q08773 1120 aa11.82□□□□□ -0.52
VMA7YGR020C PRY3P47033 881 aa11.81□□□□□ -0.52
VMA7YGR020C AVT3P36062 692 aa11.73□□□□□ -0.53
VMA7YGR020C RPG1P38249 964 aaKnown RBP11.69□□□□□ -0.54
VMA7YGR020C RSE1Q04693 1361 aaKnown RBP11.41□□□□□ -0.58
VMA7YGR020C TSR3Q12094 313 aaKnown RBP11.29□□□□□ -0.6
VMA7YGR020C YCK3P39962 524 aa11.17□□□□□ -0.62
VMA7YGR020C HAA1Q12753 694 aaKnown RBP11.11□□□□□ -0.63
VMA7YGR020C RPL17AP05740 184 aaKnown RBP11.03□□□□□ -0.64
VMA7YGR020C RPL17BP46990 184 aaKnown RBP11.03□□□□□ -0.64
VMA7YGR020C TFA1P36100 482 aa10.97□□□□□ -0.65
VMA7YGR020C REB1P21538 810 aa10.95□□□□□ -0.66
VMA7YGR020C MRPL32P25348 183 aa10.85□□□□□ -0.67
VMA7YGR020C SPT21P35209 758 aa10.58□□□□□ -0.72
VMA7YGR020C YKR023WP36119 530 aaKnown RBP10.41□□□□□ -0.74
VMA7YGR020C RIM101P33400 625 aa10.36□□□□□ -0.75
VMA7YGR020C CDC27P38042 758 aa10.36□□□□□ -0.75
VMA7YGR020C YGL015CP33199 130 aa10.33□□□□□ -0.76
VMA7YGR020C HOP09932 586 aa10.19□□□□□ -0.78
VMA7YGR020C TFC8Q12308 588 aa10.19□□□□□ -0.78
VMA7YGR020C DCD1P06773 312 aa10.13□□□□□ -0.79
VMA7YGR020C UBP10P53874 792 aaPredicted RBP10.03□□□□□ -0.8
VMA7YGR020C OXP1P28273 1286 aa10.02□□□□□ -0.81
VMA7YGR020C MAP2P38174 421 aaKnown RBP10□□□□□ -0.81
VMA7YGR020C YIL055CP40523 627 aaKnown RBP9.92□□□□□ -0.82
VMA7YGR020C BCH2P36122 765 aa9.87□□□□□ -0.83
VMA7YGR020C PTP3P40048 928 aa9.86□□□□□ -0.83
VMA7YGR020C SCY1P53009 804 aa9.85□□□□□ -0.83
VMA7YGR020C YAH1Q12184 172 aaKnown RBP9.84□□□□□ -0.83
VMA7YGR020C SSP1P38871 571 aa9.76□□□□□ -0.85
VMA7YGR020C RSM7P47150 247 aa9.74□□□□□ -0.85
VMA7YGR020C SLX5P32828 619 aaKnown RBP9.71□□□□□ -0.86
VMA7YGR020C YLR271WQ06152 274 aa9.68□□□□□ -0.86
VMA7YGR020C EPS1P40557 701 aa9.64□□□□□ -0.87
VMA7YGR020C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.64□□□□□ -0.87not detected
VMA7YGR020C TIF4632P39936 914 aaKnown RBP9.61□□□□□ -0.87
VMA7YGR020C AI2P03876 854 aa9.6□□□□□ -0.87
VMA7YGR020C BDF1P35817 686 aa9.6□□□□□ -0.87
VMA7YGR020C BBC1P47068 1157 aa9.58□□□□□ -0.88
VMA7YGR020C TGL3P40308 642 aa9.57□□□□□ -0.88
VMA7YGR020C PSD2P53037 1138 aaKnown RBP9.46□□□□□ -0.9
VMA7YGR020C MGA2P40578 1113 aa9.44□□□□□ -0.9
VMA7YGR020C CST9Q06032 482 aa9.37□□□□□ -0.91
VMA7YGR020C BUD31P25337 157 aaPredicted RBP9.34□□□□□ -0.91
VMA7YGR020C MRM1P25270 412 aa9.29□□□□□ -0.92
VMA7YGR020C NSR1P27476 414 aaKnown RBP RIP-Chip data9.23□□□□□ -0.93 RIP-Chip
VMA7YGR020C MST1P07236 462 aa9.21□□□□□ -0.94
VMA7YGR020C YOR238WQ08634 303 aa9.2□□□□□ -0.94
VMA7YGR020C UBP9P39967 754 aa9.19□□□□□ -0.94
VMA7YGR020C YAP5P40574 245 aa9.17□□□□□ -0.94
VMA7YGR020C RTG3P38165 486 aa9.14□□□□□ -0.95
VMA7YGR020C RCR1P38212 213 aa9.08□□□□□ -0.96
VMA7YGR020C VPS29P38759 282 aa9.05□□□□□ -0.96
VMA7YGR020C YMR1P47147 688 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
VMA7YGR020C YBL029C-AQ3E756 94 aa9□□□□□ -0.97
VMA7YGR020C RAM2P29703 316 aa8.99□□□□□ -0.97
VMA7YGR020C PIB1Q06651 286 aa8.99□□□□□ -0.97
VMA7YGR020C RQC2Q12532 1038 aaKnown RBP8.97□□□□□ -0.97
VMA7YGR020C DBP1P24784 617 aaKnown RBP8.96□□□□□ -0.98
VMA7YGR020C GTT3P39996 337 aa8.95□□□□□ -0.98
VMA7YGR020C YFR006WP43590 535 aa8.94□□□□□ -0.98
VMA7YGR020C STS1P38637 319 aa8.93□□□□□ -0.98
VMA7YGR020C VNX1P42839 908 aa8.93□□□□□ -0.98
VMA7YGR020C SIS1P25294 352 aaKnown RBP8.92□□□□□ -0.98
VMA7YGR020C WSC3Q12215 556 aa8.92□□□□□ -0.98
VMA7YGR020C DMA1P38823 416 aa8.91□□□□□ -0.98
VMA7YGR020C MAK11P20484 414 aaKnown RBP8.89□□□□□ -0.99
VMA7YGR020C SPP1Q03012 353 aa8.85□□□□□ -0.99
VMA7YGR020C VMA1P17255 1071 aaKnown RBP8.81□□□□□ -1
VMA7YGR020C TIF11P38912 153 aaKnown RBP8.8□□□□□ -1
VMA7YGR020C MIF2P35201 549 aa8.79□□□□□ -1
VMA7YGR020C COQ8P27697 501 aa8.77□□□□□ -1.01
VMA7YGR020C MSB4Q12317 492 aa8.76□□□□□ -1.01
VMA7YGR020C YOL036WQ08206 761 aa8.75□□□□□ -1.01
VMA7YGR020C SAM3Q08986 587 aa8.75□□□□□ -1.01
VMA7YGR020C SET1P38827 1080 aaKnown RBP8.74□□□□□ -1.01
VMA7YGR020C SET4P42948 560 aa8.73□□□□□ -1.01
VMA7YGR020C EDS1P38073 919 aa8.72□□□□□ -1.01
VMA7YGR020C ULI1P43604 169 aa8.72□□□□□ -1.01
VMA7YGR020C EAP1P36041 632 aaKnown RBP8.69□□□□□ -1.02
VMA7YGR020C IOC2Q12072 812 aa8.69□□□□□ -1.02
VMA7YGR020C PTC3P34221 468 aaKnown RBP8.68□□□□□ -1.02
VMA7YGR020C NOP53Q12080 455 aaKnown RBP8.67□□□□□ -1.02
VMA7YGR020C GYP5Q12344 894 aa8.65□□□□□ -1.02
VMA7YGR020C LDB19Q12502 818 aa8.65□□□□□ -1.02
VMA7YGR020C TRP5P00931 707 aaKnown RBP8.63□□□□□ -1.03
VMA7YGR020C GRE2Q12068 342 aaKnown RBP8.63□□□□□ -1.03
VMA7YGR020C FKH1P40466 484 aa8.62□□□□□ -1.03
VMA7YGR020C ATH1P48016 1211 aa8.61□□□□□ -1.03
VMA7YGR020C ABP1P15891 592 aaKnown RBP8.6□□□□□ -1.03
VMA7YGR020C AIR2Q12476 344 aaKnown RBP8.6□□□□□ -1.03
VMA7YGR020C GUT1P32190 709 aa8.58□□□□□ -1.04
VMA7YGR020C DCW1P36091 449 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms