RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C CIK1Q01649 594 aa3.35□□□□□ -1.87
RPA43YOR340C YPL014WQ02606 381 aa3.35□□□□□ -1.87
RPA43YOR340C YPL068CQ02749 293 aa3.35□□□□□ -1.87
RPA43YOR340C IZH1Q03419 316 aa3.35□□□□□ -1.87
RPA43YOR340C FMP45Q07651 309 aa3.35□□□□□ -1.87
RPA43YOR340C NSE1Q07913 336 aa3.35□□□□□ -1.87
RPA43YOR340C THI20Q08224 551 aa3.35□□□□□ -1.87
RPA43YOR340C THP1Q08231 455 aa3.35□□□□□ -1.87
RPA43YOR340C MEX67Q99257 599 aaKnown RBP3.35□□□□□ -1.87
RPA43YOR340C RPL42AP0CX27 106 aaKnown RBP3.34□□□□□ -1.87
RPA43YOR340C RPL42BP0CX28 106 aaKnown RBP3.34□□□□□ -1.87
RPA43YOR340C SEC63P14906 663 aa3.34□□□□□ -1.87
RPA43YOR340C CLC1P17891 233 aa3.34□□□□□ -1.87
RPA43YOR340C MET16P18408 261 aaPredicted RBP3.34□□□□□ -1.87
RPA43YOR340C YIM1P28625 365 aa3.34□□□□□ -1.87
RPA43YOR340C RML2P32611 393 aa3.34□□□□□ -1.87
RPA43YOR340C ATO2P32907 282 aa3.34□□□□□ -1.87
RPA43YOR340C HCS1P34243 683 aa3.34□□□□□ -1.87
RPA43YOR340C ATG12P38316 186 aa3.34□□□□□ -1.87
RPA43YOR340C SWC5P38326 303 aa3.34□□□□□ -1.87
RPA43YOR340C URA8P38627 578 aaPredicted RBP3.34□□□□□ -1.87
RPA43YOR340C LEU5P38702 357 aa3.34□□□□□ -1.87
RPA43YOR340C LAG1P38703 411 aa3.34□□□□□ -1.87
RPA43YOR340C TCD1P38756 429 aa3.34□□□□□ -1.87
RPA43YOR340C EDC3P39998 551 aaKnown RBP3.34□□□□□ -1.87
RPA43YOR340C MKT1P40850 830 aaKnown RBP3.34□□□□□ -1.87
RPA43YOR340C VMA13P41807 478 aaKnown RBP3.34□□□□□ -1.87
RPA43YOR340C ZIM17P42844 174 aa3.34□□□□□ -1.87
RPA43YOR340C RRT5P43607 289 aa3.34□□□□□ -1.87
RPA43YOR340C ATG27P46989 271 aa3.34□□□□□ -1.87
RPA43YOR340C TCB2P48231 1178 aa3.34□□□□□ -1.87
RPA43YOR340C YNL234WP53857 426 aa3.34□□□□□ -1.87
RPA43YOR340C KAP120Q02932 1032 aa3.34□□□□□ -1.87
RPA43YOR340C CTL1Q03220 320 aaKnown RBP3.34□□□□□ -1.87
RPA43YOR340C RCF1Q03713 159 aa3.34□□□□□ -1.87
RPA43YOR340C RTN1Q04947 295 aaKnown RBP3.34□□□□□ -1.87
RPA43YOR340C ECI1Q05871 280 aa3.34□□□□□ -1.87
RPA43YOR340C SNA4Q07549 140 aa3.34□□□□□ -1.87
RPA43YOR340C MSF1P08425 469 aa3.33□□□□□ -1.88
RPA43YOR340C MDH1P17505 334 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
RPA43YOR340C ARF2P19146 181 aaKnown RBP3.33□□□□□ -1.88
RPA43YOR340C FPR1P20081 114 aaKnown RBP3.33□□□□□ -1.88
RPA43YOR340C SGV1P23293 657 aaKnown RBP3.33□□□□□ -1.88
RPA43YOR340C SNT1P25357 1226 aa3.33□□□□□ -1.88
RPA43YOR340C SPB1P25582 841 aaPredicted RBP3.33□□□□□ -1.88
RPA43YOR340C ERV1P27882 189 aa3.33□□□□□ -1.88
RPA43YOR340C TFB1P32776 642 aa3.33□□□□□ -1.88
RPA43YOR340C THI2P38141 450 aa3.33□□□□□ -1.88
RPA43YOR340C RRT2P38332 387 aa3.33□□□□□ -1.88
RPA43YOR340C HIS2P38635 335 aa3.33□□□□□ -1.88
RPA43YOR340C APE4P38821 490 aa3.33□□□□□ -1.88
RPA43YOR340C MBB1P39534 108 aa3.33□□□□□ -1.88
RPA43YOR340C JEM1P40358 645 aa3.33□□□□□ -1.88
RPA43YOR340C RTT101P47050 842 aa3.33□□□□□ -1.88
RPA43YOR340C YGL108CP53139 140 aa3.33□□□□□ -1.88
RPA43YOR340C BUD32P53323 261 aa3.33□□□□□ -1.88
RPA43YOR340C YMR034CQ05131 434 aaPredicted RBP3.33□□□□□ -1.88
RPA43YOR340C APC5Q08683 685 aa3.33□□□□□ -1.88
RPA43YOR340C YOR365CQ08844 703 aa3.33□□□□□ -1.88
RPA43YOR340C DAS2Q12084 232 aa3.33□□□□□ -1.88
RPA43YOR340C IZH4Q99393 312 aa3.33□□□□□ -1.88
RPA43YOR340C MSB2P32334 1306 aa3.33□□□□□ -1.88
RPA43YOR340C SEN1Q00416 2231 aaKnown RBP3.33□□□□□ -1.88
RPA43YOR340C YPT1P01123 206 aaKnown RBP3.32□□□□□ -1.88
RPA43YOR340C RAD52P06778 471 aaKnown RBP3.32□□□□□ -1.88
RPA43YOR340C SPS4P09937 338 aa3.32□□□□□ -1.88
RPA43YOR340C PEP5P12868 1029 aa3.32□□□□□ -1.88
RPA43YOR340C IDH2P28241 369 aaKnown RBP3.32□□□□□ -1.88
RPA43YOR340C RAD14P28519 371 aa3.32□□□□□ -1.88
RPA43YOR340C MEI4P29467 408 aa3.32□□□□□ -1.88
RPA43YOR340C YME2P32843 850 aa3.32□□□□□ -1.88
RPA43YOR340C SGE1P33335 543 aa3.32□□□□□ -1.88
RPA43YOR340C EBP2P36049 427 aaKnown RBP3.32□□□□□ -1.88
RPA43YOR340C BNA4P38169 460 aa3.32□□□□□ -1.88
RPA43YOR340C LCP5P40079 357 aaPredicted RBP3.32□□□□□ -1.88
RPA43YOR340C ATM1P40416 690 aa3.32□□□□□ -1.88
RPA43YOR340C CAK1P43568 368 aaPredicted RBP3.32□□□□□ -1.88
RPA43YOR340C YGR149WP48236 432 aa3.32□□□□□ -1.88
RPA43YOR340C PRP24P49960 444 aaKnown RBP3.32□□□□□ -1.88
RPA43YOR340C KAP114P53067 1004 aa3.32□□□□□ -1.88
RPA43YOR340C PEX31P53203 462 aa3.32□□□□□ -1.88
RPA43YOR340C BTN2P53286 410 aa3.32□□□□□ -1.88
RPA43YOR340C YNL181WP53878 407 aa3.32□□□□□ -1.88
RPA43YOR340C ALF1P53904 254 aa3.32□□□□□ -1.88
RPA43YOR340C YNL040WP53960 456 aaPredicted RBP3.32□□□□□ -1.88
RPA43YOR340C NUP100Q02629 959 aa3.32□□□□□ -1.88
RPA43YOR340C SHR3Q02774 210 aa3.32□□□□□ -1.88
RPA43YOR340C EKI1Q03764 534 aa3.32□□□□□ -1.88
RPA43YOR340C INP2Q03824 705 aa3.32□□□□□ -1.88
RPA43YOR340C IVY1Q04934 453 aa3.32□□□□□ -1.88
RPA43YOR340C KAP95Q06142 861 aaKnown RBP3.32□□□□□ -1.88
RPA43YOR340C OCA6Q12454 224 aa3.32□□□□□ -1.88
RPA43YOR340C PAR32Q12515 295 aaKnown RBP3.32□□□□□ -1.88
RPA43YOR340C POL2P21951 2222 aaKnown RBP3.32□□□□□ -1.88
RPA43YOR340C YLR462WO13556 202 aa3.31□□□□□ -1.88
RPA43YOR340C TYR1P20049 452 aa3.31□□□□□ -1.88
RPA43YOR340C CPR2P23285 205 aa3.31□□□□□ -1.88
RPA43YOR340C RPS2P25443 254 aaKnown RBP3.31□□□□□ -1.88
RPA43YOR340C GEX1P25596 615 aa3.31□□□□□ -1.88
RPA43YOR340C SNC1P31109 117 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms