RNA–Protein interactions for RNA: YJL124C

LSM1, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM1, Length 519 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM1	YJL124C	TAF6	P53040	516 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	YGR079W	P53249	370 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	TRM112	P53738	135 aa	Predicted RBP	3.22	□□□□□ -1.89
LSM1	YJL124C	ASI2	P53895	289 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	MSC2	Q03455	724 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	SPC24	Q04477	213 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	AIM33	Q04516	312 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	YEH2	Q07950	538 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	YOR365C	Q08844	703 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	MSH5	Q12175	901 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	TRM11	Q12463	433 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	ZPS1	Q12512	249 aa		3.22	□□□□□ -1.89
LSM1	YJL124C	YLR415C	O13578	112 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	CYC1	P00044	109 aa	Predicted RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	ADH2	P00331	348 aa	Known RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	COX3	P00420	269 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	AAC1	P04710	309 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	RHO2	P06781	192 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	CHS1	P08004	1131 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	SPE1	P08432	466 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	NFT1	P0CE68	1218 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	PUT3	P25502	979 aa	Predicted RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	ERG9	P29704	444 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
LSM1	YJL124C	YSC83	P32792	385 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	RPC34	P32910	317 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	TRM2	P33753	639 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YOX1	P34161	385 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	DBP7	P36120	742 aa	Known RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	MRPL7	P36519	292 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YPK3	P38070	525 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	DTR1	P38125	572 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	QDR3	P38227	689 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	RFC5	P38251	354 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	VHC1	P38329	1120 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	MIC12	P38341	106 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	SIC1	P38634	284 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	ARO9	P38840	513 aa	Predicted RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	FMO1	P38866	432 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	ELO1	P39540	310 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	ERG28	P40030	148 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	POG1	P40473	351 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	SNL1	P40548	159 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	PAC11	P40960	533 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	AGP3	P43548	558 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	PTR3	P43606	678 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	SNG1	P46950	547 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YJL163C	P46996	555 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	SNX4	P47057	423 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	COX16	P47081	118 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YDL186W	P48568	277 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YGL117W	P53133	265 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YGL108C	P53139	140 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	VPS73	P53142	486 aa	Known RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	GET1	P53192	235 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YGR042W	P53227	271 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	NOP19	P53317	196 aa	Predicted RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	SPC98	P53540	846 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	MTQ1	P53944	314 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	MPS1	P54199	764 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	UBP16	Q02863	499 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	GCN5	Q03330	439 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	VPS60	Q03390	229 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	PLB2	Q03674	706 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YFT2	Q06676	274 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	CYK3	Q07533	885 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	TPO1	Q07824	586 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	ESA1	Q08649	445 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	DDC1	Q08949	612 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	AFT2	Q08957	416 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YPL216W	Q08964	1102 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	MRH1	Q12117	320 aa	Predicted RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	PKH2	Q12236	1081 aa	Known RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	RUP1	Q12242	671 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	YPR1	Q12458	312 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	RRI1	Q12468	440 aa		3.21	□□□□□ -1.9
LSM1	YJL124C	LSO2	Q3E772	92 aa	Known RBP	3.21	□□□□□ -1.9
LSM1	YJL124C	HTB1	P02293	131 aa	Known RBP	3.2	□□□□□ -1.9
LSM1	YJL124C	HTB2	P02294	131 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	ATP1	P07251	545 aa	Known RBP	3.2	□□□□□ -1.9
LSM1	YJL124C	RIP1	P08067	215 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	YBR121C-A	P0C5L4	52 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	MAS2	P11914	482 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	SNA3	P14359	133 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	SRP54	P20424	541 aa	Known RBP	3.2	□□□□□ -1.9
LSM1	YJL124C	YSP3	P25036	478 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	APL1	P27351	700 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	GAC1	P28006	793 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	CAF4	P36130	643 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	BMT2	P38278	337 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	FZO1	P38297	855 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	HIS2	P38635	335 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	YHR177W	P38867	453 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	LNP1	P38878	278 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	CCT2	P39076	527 aa	Known RBP	3.2	□□□□□ -1.9
LSM1	YJL124C	RPH1	P39956	796 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	VAB2	P40003	282 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	YER121W	P40076	114 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	RSM25	P40496	264 aa		3.2	□□□□□ -1.9
LSM1	YJL124C	CIN5	P40917	295 aa		3.2	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms