RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	YGL082W	P53155	381 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	YNL050C	P53952	270 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	PNG1	Q02890	363 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	RRN11	Q04712	507 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	ASA1	Q06822	443 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	YLL007C	Q07799	665 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	LDS2	Q08218	356 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	YOL075C	Q08234	1294 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	SGT1	Q08446	395 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	RPL18A	P0CX49	186 aa	Known RBP	5.25	□□□□□ -1.57
SNF11	YDR073W	RPL18B	P0CX50	186 aa	Known RBP	5.25	□□□□□ -1.57
SNF11	YDR073W	RSR1	P13856	272 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	PRP16	P15938	1071 aa	Predicted RBP	5.25	□□□□□ -1.57
SNF11	YDR073W	YUR1	P26725	428 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	RAD23	P32628	398 aa	Known RBP	5.25	□□□□□ -1.57
SNF11	YDR073W	RPT5	P33297	434 aa	Known RBP	5.25	□□□□□ -1.57
SNF11	YDR073W	RPC25	P35718	212 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	LEU5	P38702	357 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	CSM2	P40465	213 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	SAM50	P53969	484 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	YPL068C	Q02749	293 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	RSN1	Q03516	953 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	MSS11	Q03825	758 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	SMP3	Q04174	516 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	BUR2	Q05949	395 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	ORM2	Q06144	216 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	SKI7	Q08491	747 aa	Predicted RBP	5.25	□□□□□ -1.57
SNF11	YDR073W	GEP3	Q08622	556 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	YLR112W	Q12130	139 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	YOL107W	Q12239	342 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	RBD2	Q12270	262 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	MED4	Q12343	284 aa		5.25	□□□□□ -1.57
SNF11	YDR073W	RPL24A	P04449	155 aa	Known RBP	5.24	□□□□□ -1.57
SNF11	YDR073W	TPK3	P05986	398 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	EFB1	P32471	206 aa	Known RBP	5.24	□□□□□ -1.57
SNF11	YDR073W	SPR1	P32603	445 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	DED81	P38707	554 aa	Known RBP	5.24	□□□□□ -1.57
SNF11	YDR073W	YPT11	P48559	417 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	YDL186W	P48568	277 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	FRE4	P53746	719 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	YNL260C	P53846	198 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	YNL181W	P53878	407 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	BET5	Q03630	159 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	YLR173W	Q06247	608 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	IRC10	Q08118	586 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
SNF11	YDR073W	ORT1	Q12375	292 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	PAA1	Q12447	191 aa	Known RBP	5.24	□□□□□ -1.57
SNF11	YDR073W	YPR1	Q12458	312 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	FMP16	Q12497	93 aa		5.24	□□□□□ -1.57
SNF11	YDR073W	ARG4	P04076	463 aa	Predicted RBP	5.23	□□□□□ -1.57
SNF11	YDR073W	RNA1	P11745	407 aa	Known RBP	5.23	□□□□□ -1.57
SNF11	YDR073W	MSS116	P15424	664 aa	Known RBP	5.23	□□□□□ -1.57
SNF11	YDR073W	LSB5	P25369	354 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	MNS1	P32906	549 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	PDR3	P33200	976 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	ECT1	P33412	323 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	FRE2	P36033	711 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	YPK3	P38070	525 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	SCO2	P38072	301 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	RCY1	P39531	840 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	LCP5	P40079	357 aa	Predicted RBP	5.23	□□□□□ -1.57
SNF11	YDR073W	RTS2	P40962	232 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	STE24	P47154	453 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	ECI1	Q05871	280 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	COQ11	Q05892	277 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	SHS1	Q07657	551 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	THI20	Q08224	551 aa		5.23	□□□□□ -1.57
SNF11	YDR073W	DNL4	Q08387	944 aa	Predicted RBP	5.23	□□□□□ -1.57
SNF11	YDR073W	ATP1	P07251	545 aa	Known RBP	5.22	□□□□□ -1.57
SNF11	YDR073W	MAS2	P11914	482 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	CDC42	P19073	191 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	CKI1	P20485	582 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	ADY2	P25613	283 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	TCD1	P38756	429 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	FET3	P38993	636 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	YMR134W	P40207	237 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	UTP25	P40498	721 aa	Known RBP	5.22	□□□□□ -1.57
SNF11	YDR073W	CDC40	P40968	455 aa	Predicted RBP	5.22	□□□□□ -1.57
SNF11	YDR073W	SNO3	P43544	222 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	IRC15	Q02733	499 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	MRPL51	Q06090	140 aa	Predicted RBP	5.22	□□□□□ -1.57
SNF11	YDR073W	YPR022C	Q12139	1133 aa		5.22	□□□□□ -1.57
SNF11	YDR073W	HEM2	P05373	342 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	YCR100C	P25606	316 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	HXT1	P32465	570 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	ECM15	P35195	104 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	RRP3	P38712	501 aa	Known RBP	5.21	□□□□□ -1.58
SNF11	YDR073W	SCC4	P40090	624 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	SEC9	P40357	651 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	YJL070C	P40361	888 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	YGR168C	P53293	376 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	IDP3	P53982	420 aa	Known RBP	5.21	□□□□□ -1.58
SNF11	YDR073W	IZH1	Q03419	316 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	BNA5	Q05979	453 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	BCP1	Q06338	283 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	VPS74	Q06385	345 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	SRL2	Q12020	392 aa		5.21	□□□□□ -1.58
SNF11	YDR073W	RPS16A	P0CX51	143 aa	Known RBP	5.2	□□□□□ -1.58
SNF11	YDR073W	RPS16B	P0CX52	143 aa	Known RBP	5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms