RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF11, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF11YDR073W DRS1P32892 752 aaKnown RBP14.08□□□□□ -0.16
SNF11YDR073W MTC1P47018 478 aaKnown RBP13.77□□□□□ -0.21
SNF11YDR073W BFR2Q06631 534 aaKnown RBP12.63□□□□□ -0.39
SNF11YDR073W FAP1P53971 965 aa12.56□□□□□ -0.4
SNF11YDR073W TFA1P36100 482 aa12.51□□□□□ -0.41
SNF11YDR073W PRY3P47033 881 aa11.84□□□□□ -0.51
SNF11YDR073W PRI1P10363 409 aa11.8□□□□□ -0.52
SNF11YDR073W RQC2Q12532 1038 aaKnown RBP11.78□□□□□ -0.52
SNF11YDR073W AAD16Q02895 342 aa11.76□□□□□ -0.53
SNF11YDR073W AVT3P36062 692 aa11.7□□□□□ -0.54
SNF11YDR073W DIP2Q12220 943 aaPredicted RBP11.63□□□□□ -0.55
SNF11YDR073W ISW2Q08773 1120 aa11.46□□□□□ -0.57
SNF11YDR073W YCK3P39962 524 aa11.33□□□□□ -0.6
SNF11YDR073W RPG1P38249 964 aaKnown RBP11.31□□□□□ -0.6
SNF11YDR073W HAA1Q12753 694 aaKnown RBP11.25□□□□□ -0.61
SNF11YDR073W TSR3Q12094 313 aaKnown RBP11.04□□□□□ -0.64
SNF11YDR073W RSE1Q04693 1361 aaKnown RBP10.91□□□□□ -0.66
SNF11YDR073W TAF7Q05021 590 aa10.8□□□□□ -0.68
SNF11YDR073W DMA1P38823 416 aa10.72□□□□□ -0.69
SNF11YDR073W MRPL32P25348 183 aa10.65□□□□□ -0.7
SNF11YDR073W RPL17AP05740 184 aaKnown RBP10.47□□□□□ -0.73
SNF11YDR073W RPL17BP46990 184 aaKnown RBP10.47□□□□□ -0.73
SNF11YDR073W REB1P21538 810 aa10.44□□□□□ -0.74
SNF11YDR073W YGL015CP33199 130 aa10.36□□□□□ -0.75
SNF11YDR073W PTP3P40048 928 aa10.33□□□□□ -0.76
SNF11YDR073W LEO1P38439 464 aa10.27□□□□□ -0.77
SNF11YDR073W SPT21P35209 758 aa10.08□□□□□ -0.8
SNF11YDR073W CDC27P38042 758 aa10.08□□□□□ -0.8
SNF11YDR073W RIM101P33400 625 aa10.06□□□□□ -0.8
SNF11YDR073W SSP1P38871 571 aa10.02□□□□□ -0.81
SNF11YDR073W YKR023WP36119 530 aaKnown RBP10.01□□□□□ -0.81
SNF11YDR073W UBP10P53874 792 aaPredicted RBP9.91□□□□□ -0.82
SNF11YDR073W LEU3P08638 886 aa9.86□□□□□ -0.83
SNF11YDR073W TFC8Q12308 588 aa9.81□□□□□ -0.84
SNF11YDR073W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.81□□□□□ -0.84not detected
SNF11YDR073W MAP2P38174 421 aaKnown RBP9.78□□□□□ -0.84
SNF11YDR073W SAS10Q12136 610 aaPredicted RBP9.77□□□□□ -0.85
SNF11YDR073W YAH1Q12184 172 aaKnown RBP9.76□□□□□ -0.85
SNF11YDR073W OXP1P28273 1286 aa9.74□□□□□ -0.85
SNF11YDR073W HOP09932 586 aa9.7□□□□□ -0.86
SNF11YDR073W BUD31P25337 157 aaPredicted RBP9.65□□□□□ -0.86
SNF11YDR073W YIL055CP40523 627 aaKnown RBP9.64□□□□□ -0.87
SNF11YDR073W DCD1P06773 312 aa9.62□□□□□ -0.87
SNF11YDR073W YLR271WQ06152 274 aa9.61□□□□□ -0.87
SNF11YDR073W MGA2P40578 1113 aa9.56□□□□□ -0.88
SNF11YDR073W RPN1P38764 993 aaKnown RBP9.53□□□□□ -0.88
SNF11YDR073W TGL3P40308 642 aa9.5□□□□□ -0.89
SNF11YDR073W SCY1P53009 804 aa9.5□□□□□ -0.89
SNF11YDR073W DMA2P53924 522 aa9.5□□□□□ -0.89
SNF11YDR073W BCH2P36122 765 aa9.46□□□□□ -0.9
SNF11YDR073W TIF4632P39936 914 aaKnown RBP9.46□□□□□ -0.9
SNF11YDR073W RSM7P47150 247 aa9.45□□□□□ -0.9
SNF11YDR073W SLX5P32828 619 aaKnown RBP9.44□□□□□ -0.9
SNF11YDR073W CST9Q06032 482 aa9.37□□□□□ -0.91
SNF11YDR073W SPB4P25808 606 aaPredicted RBP9.34□□□□□ -0.91
SNF11YDR073W RLF2Q12495 606 aa9.32□□□□□ -0.92
SNF11YDR073W CKB1P43639 278 aa9.27□□□□□ -0.93
SNF11YDR073W PSD2P53037 1138 aaKnown RBP9.27□□□□□ -0.93
SNF11YDR073W UBP9P39967 754 aa9.24□□□□□ -0.93
SNF11YDR073W AI2P03876 854 aa9.23□□□□□ -0.93
SNF11YDR073W SET1P38827 1080 aaKnown RBP9.22□□□□□ -0.93
SNF11YDR073W VPS70P47161 811 aa9.22□□□□□ -0.93
SNF11YDR073W BBC1P47068 1157 aa9.21□□□□□ -0.94
SNF11YDR073W ABP1P15891 592 aaKnown RBP9.19□□□□□ -0.94
SNF11YDR073W EPS1P40557 701 aa9.18□□□□□ -0.94
SNF11YDR073W BDF1P35817 686 aa9.17□□□□□ -0.94
SNF11YDR073W IFH1P39520 1085 aa9.17□□□□□ -0.94
SNF11YDR073W YPR148CQ06523 435 aa9.17□□□□□ -0.94
SNF11YDR073W RAM2P29703 316 aa9.16□□□□□ -0.94
SNF11YDR073W MST1P07236 462 aa9.13□□□□□ -0.95
SNF11YDR073W HGH1P48362 394 aaKnown RBP9.08□□□□□ -0.96
SNF11YDR073W SIS1P25294 352 aaKnown RBP9.07□□□□□ -0.96
SNF11YDR073W NSR1P27476 414 aaKnown RBP RIP-Chip data9.06□□□□□ -0.96not detected
SNF11YDR073W KIN1P13185 1064 aa9.05□□□□□ -0.96
SNF11YDR073W DSF2P38213 736 aa9.05□□□□□ -0.96
SNF11YDR073W PBS2P08018 668 aa9.02□□□□□ -0.97
SNF11YDR073W YNR021WP53723 404 aaKnown RBP9.02□□□□□ -0.97
SNF11YDR073W MRM1P25270 412 aa8.99□□□□□ -0.97
SNF11YDR073W YOR238WQ08634 303 aa8.97□□□□□ -0.97
SNF11YDR073W MAK11P20484 414 aaKnown RBP8.95□□□□□ -0.98
SNF11YDR073W RCR1P38212 213 aa8.95□□□□□ -0.98
SNF11YDR073W GLC3P32775 704 aa8.93□□□□□ -0.98
SNF11YDR073W RTG3P38165 486 aa8.92□□□□□ -0.98
SNF11YDR073W AIM7Q12156 149 aa8.92□□□□□ -0.98
SNF11YDR073W MAM3Q12296 706 aa8.92□□□□□ -0.98
SNF11YDR073W IES2P40154 320 aa8.86□□□□□ -0.99
SNF11YDR073W YAP5P40574 245 aa8.86□□□□□ -0.99
SNF11YDR073W YBL029C-AQ3E756 94 aa8.83□□□□□ -1
SNF11YDR073W COQ8P27697 501 aa8.82□□□□□ -1
SNF11YDR073W VNX1P42839 908 aa8.82□□□□□ -1
SNF11YDR073W GUA1P38625 525 aaKnown RBP8.81□□□□□ -1
SNF11YDR073W REF2P42073 533 aaPredicted RBP8.81□□□□□ -1
SNF11YDR073W DIT2P21595 489 aa8.8□□□□□ -1
SNF11YDR073W MAK21Q12176 1025 aaKnown RBP8.8□□□□□ -1
SNF11YDR073W VPS29P38759 282 aa8.78□□□□□ -1
SNF11YDR073W NUP42P49686 430 aaKnown RBP8.78□□□□□ -1
SNF11YDR073W ATF2P53296 535 aa8.78□□□□□ -1
SNF11YDR073W NOP53Q12080 455 aaKnown RBP8.78□□□□□ -1
SNF11YDR073W HPC2Q01448 625 aa8.74□□□□□ -1.01
SNF11YDR073W AIM44Q99299 758 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms