RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W SKN1P33336 771 aa3.2□□□□□ -1.9
UBC9YDL064W RXT2P38255 430 aa3.2□□□□□ -1.9
UBC9YDL064W MLH1P38920 769 aa3.2□□□□□ -1.9
UBC9YDL064W PAN6P40459 309 aa3.2□□□□□ -1.9
UBC9YDL064W COS1P53822 381 aa3.2□□□□□ -1.9
UBC9YDL064W CWC25P53854 179 aaKnown RBP3.2□□□□□ -1.9
UBC9YDL064W HER2Q03557 464 aa3.2□□□□□ -1.9
UBC9YDL064W HRI1Q05905 244 aaKnown RBP3.2□□□□□ -1.9
UBC9YDL064W TPT1Q12272 230 aaKnown RBP3.2□□□□□ -1.9
UBC9YDL064W NCA2Q12374 616 aa3.2□□□□□ -1.9
UBC9YDL064W AHC1Q12433 566 aa3.2□□□□□ -1.9
UBC9YDL064W CAP2P13517 287 aa3.19□□□□□ -1.9
UBC9YDL064W YHR131CP38835 850 aa3.19□□□□□ -1.9
UBC9YDL064W TOS3P43637 560 aa3.19□□□□□ -1.9
UBC9YDL064W BRO1P48582 844 aa3.19□□□□□ -1.9
UBC9YDL064W NUP116Q02630 1113 aa3.19□□□□□ -1.9
UBC9YDL064W PEX25Q02969 394 aa3.19□□□□□ -1.9
UBC9YDL064W NDL1Q06568 189 aa3.19□□□□□ -1.9
UBC9YDL064W NSE1Q07913 336 aa3.19□□□□□ -1.9
UBC9YDL064W RAX1Q08760 435 aa3.19□□□□□ -1.9
UBC9YDL064W PHA2P32452 334 aa3.18□□□□□ -1.9
UBC9YDL064W CSE2P33308 149 aa3.18□□□□□ -1.9
UBC9YDL064W ATP3P38077 311 aaKnown RBP3.18□□□□□ -1.9
UBC9YDL064W MNL1P38888 796 aa3.18□□□□□ -1.9
UBC9YDL064W MMF1P40185 145 aaKnown RBP3.18□□□□□ -1.9
UBC9YDL064W YGR210CP42942 411 aa3.18□□□□□ -1.9
UBC9YDL064W RUP1Q12242 671 aa3.18□□□□□ -1.9
UBC9YDL064W SSC1P0CS90 654 aaKnown RBP3.17□□□□□ -1.9
UBC9YDL064W PET123P17558 318 aa3.17□□□□□ -1.9
UBC9YDL064W DAL2P25335 343 aa3.17□□□□□ -1.9
UBC9YDL064W ARO2P28777 376 aaKnown RBP3.17□□□□□ -1.9
UBC9YDL064W YJR085CP47131 105 aaKnown RBP3.17□□□□□ -1.9
UBC9YDL064W STE24P47154 453 aa3.17□□□□□ -1.9
UBC9YDL064W RRG7Q08774 242 aaPredicted RBP3.17□□□□□ -1.9
UBC9YDL064W HRT3Q12347 344 aa3.17□□□□□ -1.9
UBC9YDL064W FRE6Q12473 712 aa3.17□□□□□ -1.9
UBC9YDL064W HSP82P02829 709 aaKnown RBP3.16□□□□□ -1.9
UBC9YDL064W ATP1P07251 545 aaKnown RBP3.16□□□□□ -1.9
UBC9YDL064W RPL12AP0CX53 165 aaKnown RBP3.16□□□□□ -1.9
UBC9YDL064W RPL12BP0CX54 165 aa3.16□□□□□ -1.9
UBC9YDL064W DAP2P18962 818 aa3.16□□□□□ -1.9
UBC9YDL064W POP5P28005 173 aa3.16□□□□□ -1.9
UBC9YDL064W DPH5P32469 300 aaPredicted RBP3.16□□□□□ -1.9
UBC9YDL064W RRP1P35178 278 aaPredicted RBP3.16□□□□□ -1.9
UBC9YDL064W YHR177WP38867 453 aa3.16□□□□□ -1.9
UBC9YDL064W MRM2P53123 320 aa3.16□□□□□ -1.9
UBC9YDL064W RCF1Q03713 159 aa3.16□□□□□ -1.9
UBC9YDL064W URC2Q04411 772 aa3.16□□□□□ -1.9
UBC9YDL064W SLM5P25345 492 aaKnown RBP3.15□□□□□ -1.91
UBC9YDL064W PUP2P32379 260 aa3.15□□□□□ -1.91
UBC9YDL064W YSW1P38280 609 aa3.15□□□□□ -1.91
UBC9YDL064W SPP381P38282 291 aaPredicted RBP3.15□□□□□ -1.91
UBC9YDL064W YIL029CP40538 142 aa3.15□□□□□ -1.91
UBC9YDL064W MDE1P47095 244 aa3.15□□□□□ -1.91
UBC9YDL064W YGL242CP53066 181 aa3.15□□□□□ -1.91
UBC9YDL064W MLC1P53141 149 aa3.15□□□□□ -1.91
UBC9YDL064W YGR117CP53270 476 aa3.15□□□□□ -1.91
UBC9YDL064W SPR6Q01684 191 aa3.15□□□□□ -1.91
UBC9YDL064W YDR541CQ03049 344 aa3.15□□□□□ -1.91
UBC9YDL064W FDH1Q08911 376 aa3.15□□□□□ -1.91
UBC9YDL064W ISY1P21374 235 aaPredicted RBP3.14□□□□□ -1.91
UBC9YDL064W YEL045CP32616 141 aa3.14□□□□□ -1.91
UBC9YDL064W MRPL4P36517 319 aa3.14□□□□□ -1.91
UBC9YDL064W MRPL10P36520 322 aa3.14□□□□□ -1.91
UBC9YDL064W ATM1P40416 690 aa3.14□□□□□ -1.91
UBC9YDL064W PAC11P40960 533 aa3.14□□□□□ -1.91
UBC9YDL064W EPL1P43572 832 aa3.14□□□□□ -1.91
UBC9YDL064W ABM1P47146 123 aa3.14□□□□□ -1.91
UBC9YDL064W BTN2P53286 410 aa3.14□□□□□ -1.91
UBC9YDL064W RRN9P53437 365 aa3.14□□□□□ -1.91
UBC9YDL064W MDG1P53885 366 aa3.14□□□□□ -1.91
UBC9YDL064W IPK1Q06667 281 aa3.14□□□□□ -1.91
UBC9YDL064W ASA1Q06822 443 aa3.14□□□□□ -1.91
UBC9YDL064W CUE5Q08412 411 aaKnown RBP3.14□□□□□ -1.91
UBC9YDL064W NFI1Q12216 726 aa3.14□□□□□ -1.91
UBC9YDL064W RBD2Q12270 262 aa3.14□□□□□ -1.91
UBC9YDL064W POM152P39685 1337 aa3.14□□□□□ -1.91
UBC9YDL064W SWI3P32591 825 aa3.13□□□□□ -1.91
UBC9YDL064W YEF1P32622 495 aa3.13□□□□□ -1.91
UBC9YDL064W TOA2P32774 122 aa3.13□□□□□ -1.91
UBC9YDL064W COX13P32799 129 aa3.13□□□□□ -1.91
UBC9YDL064W ADH5P38113 351 aaKnown RBP3.13□□□□□ -1.91
UBC9YDL064W GPX2P38143 162 aa3.13□□□□□ -1.91
UBC9YDL064W YHK8P38776 514 aa3.13□□□□□ -1.91
UBC9YDL064W APE4P38821 490 aa3.13□□□□□ -1.91
UBC9YDL064W COX14P39103 70 aa3.13□□□□□ -1.91
UBC9YDL064W LCB3P47013 409 aa3.13□□□□□ -1.91
UBC9YDL064W ASN2P49090 572 aaKnown RBP3.13□□□□□ -1.91
UBC9YDL064W RTT102P53330 157 aa3.13□□□□□ -1.91
UBC9YDL064W YPL107WQ02873 248 aa3.13□□□□□ -1.91
UBC9YDL064W TDA1Q03533 586 aa3.13□□□□□ -1.91
UBC9YDL064W MDM36Q06820 579 aa3.13□□□□□ -1.91
UBC9YDL064W NOP6Q07623 225 aaKnown RBP3.13□□□□□ -1.91
UBC9YDL064W TMC1Q08422 150 aaPredicted RBP3.13□□□□□ -1.91
UBC9YDL064W TPK3P05986 398 aa3.12□□□□□ -1.91
UBC9YDL064W NAM2P11325 894 aa3.12□□□□□ -1.91
UBC9YDL064W BLI1P35727 113 aa3.12□□□□□ -1.91
UBC9YDL064W KAP104P38217 918 aaKnown RBP3.12□□□□□ -1.91
UBC9YDL064W WSS1P38838 269 aa3.12□□□□□ -1.91
UBC9YDL064W MTQ1P53944 314 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms