RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C VMA22P38784 181 aa5.43□□□□□ -1.54
PDB1YBR221C YNG2P38806 282 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C YJL193WP39542 402 aa5.43□□□□□ -1.54
PDB1YBR221C GIM4P40005 111 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C VHS2P40463 436 aa5.43□□□□□ -1.54
PDB1YBR221C SEC24P40482 926 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C GTS1P40956 396 aa5.43□□□□□ -1.54
PDB1YBR221C ERG10P41338 398 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C OYE3P41816 400 aaPredicted RBP5.43□□□□□ -1.54
PDB1YBR221C BRE2P43132 505 aa5.43□□□□□ -1.54
PDB1YBR221C SAD1P43589 448 aa5.43□□□□□ -1.54
PDB1YBR221C TOS3P43637 560 aa5.43□□□□□ -1.54
PDB1YBR221C IRC8P47046 822 aa5.43□□□□□ -1.54
PDB1YBR221C ASN2P49090 572 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C YGR045CP53229 120 aa5.43□□□□□ -1.54
PDB1YBR221C MRP51Q02950 344 aa5.43□□□□□ -1.54
PDB1YBR221C YDR222WQ04925 415 aa5.43□□□□□ -1.54
PDB1YBR221C STP3Q05937 343 aa5.43□□□□□ -1.54
PDB1YBR221C DCS1Q06151 350 aa5.43□□□□□ -1.54
PDB1YBR221C SDO1Q07953 250 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C YLR040CQ07988 224 aa5.43□□□□□ -1.54
PDB1YBR221C YOL075CQ08234 1294 aa5.43□□□□□ -1.54
PDB1YBR221C MF(ALPHA)1P01149 165 aa5.42□□□□□ -1.54
PDB1YBR221C PAB1P04147 577 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
PDB1YBR221C RAD3P06839 778 aa5.42□□□□□ -1.54
PDB1YBR221C MATALPHA1P0CY06 175 aa5.42□□□□□ -1.54
PDB1YBR221C HMLALPHA1P0CY07 175 aa5.42□□□□□ -1.54
PDB1YBR221C PYC1P11154 1178 aaKnown RBP5.42□□□□□ -1.54
PDB1YBR221C POL30P15873 258 aaKnown RBP5.42□□□□□ -1.54
PDB1YBR221C SNF6P18888 332 aa5.42□□□□□ -1.54
PDB1YBR221C VMA16P23968 213 aa5.42□□□□□ -1.54
PDB1YBR221C MGR1P25573 417 aa5.42□□□□□ -1.54
PDB1YBR221C ADE1P27616 306 aa5.42□□□□□ -1.54
PDB1YBR221C PEX3P28795 441 aa5.42□□□□□ -1.54
PDB1YBR221C RAD23P32628 398 aaKnown RBP5.42□□□□□ -1.54
PDB1YBR221C SKG6P32900 734 aaPredicted RBP5.42□□□□□ -1.54
PDB1YBR221C PAD1P33751 242 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
PDB1YBR221C NUF2P33895 451 aa5.42□□□□□ -1.54
PDB1YBR221C AST1P35183 429 aa5.42□□□□□ -1.54
PDB1YBR221C MAE1P36013 669 aaKnown RBP5.42□□□□□ -1.54
PDB1YBR221C DOA1P36037 715 aa5.42□□□□□ -1.54
PDB1YBR221C CHK1P38147 527 aa5.42□□□□□ -1.54
PDB1YBR221C APD1P38281 316 aa5.42□□□□□ -1.54
PDB1YBR221C PRE3P38624 215 aa5.42□□□□□ -1.54
PDB1YBR221C SOP4P39543 234 aaPredicted RBP5.42□□□□□ -1.54
PDB1YBR221C GID8P40208 455 aa5.42□□□□□ -1.54
PDB1YBR221C YFL054CP43549 646 aa5.42□□□□□ -1.54
PDB1YBR221C VMA10P48836 114 aaKnown RBP5.42□□□□□ -1.54
PDB1YBR221C TNA1P53322 534 aa5.42□□□□□ -1.54
PDB1YBR221C RRN9P53437 365 aa5.42□□□□□ -1.54
PDB1YBR221C NOP13P53883 403 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
PDB1YBR221C YDR541CQ03049 344 aa5.42□□□□□ -1.54
PDB1YBR221C RPC11Q04307 110 aaPredicted RBP5.42□□□□□ -1.54
PDB1YBR221C COX20Q04935 205 aa5.42□□□□□ -1.54
PDB1YBR221C YDL114WQ07530 308 aa5.42□□□□□ -1.54
PDB1YBR221C SHS1Q07657 551 aa5.42□□□□□ -1.54
PDB1YBR221C PAM18Q07914 168 aa5.42□□□□□ -1.54
PDB1YBR221C SIL1Q08199 421 aa5.42□□□□□ -1.54
PDB1YBR221C CRT10Q08226 957 aa5.42□□□□□ -1.54
PDB1YBR221C REX4Q08237 289 aa5.42□□□□□ -1.54
PDB1YBR221C SGO1Q08490 590 aa5.42□□□□□ -1.54
PDB1YBR221C RAX1Q08760 435 aa5.42□□□□□ -1.54
PDB1YBR221C ALG6Q12001 544 aaKnown RBP5.42□□□□□ -1.54
PDB1YBR221C YRA1Q12159 226 aaKnown RBP5.42□□□□□ -1.54
PDB1YBR221C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
PDB1YBR221C OSW2Q12202 724 aa5.42□□□□□ -1.54
PDB1YBR221C YPR015CQ12531 247 aa5.42□□□□□ -1.54
PDB1YBR221C RRP12Q12754 1228 aaKnown RBP5.42□□□□□ -1.54
PDB1YBR221C FAB1P34756 2278 aa5.41□□□□□ -1.54
PDB1YBR221C GPM1P00950 247 aaKnown RBP5.41□□□□□ -1.54
PDB1YBR221C RPP0P05317 312 aaKnown RBP5.41□□□□□ -1.54
PDB1YBR221C RAD1P06777 1100 aa5.41□□□□□ -1.54
PDB1YBR221C CDC33P07260 213 aaKnown RBP5.41□□□□□ -1.54
PDB1YBR221C MET16P18408 261 aaPredicted RBP5.41□□□□□ -1.54
PDB1YBR221C YAP1P19880 650 aaKnown RBP5.41□□□□□ -1.54
PDB1YBR221C YSR3P23501 404 aa5.41□□□□□ -1.54
PDB1YBR221C RBK1P25332 333 aa5.41□□□□□ -1.54
PDB1YBR221C GSY2P27472 705 aa5.41□□□□□ -1.54
PDB1YBR221C PMI40P29952 429 aaKnown RBP5.41□□□□□ -1.54
PDB1YBR221C LHS1P36016 881 aa5.41□□□□□ -1.54
PDB1YBR221C FES1P38260 290 aa5.41□□□□□ -1.54
PDB1YBR221C IML3P38265 245 aa5.41□□□□□ -1.54
PDB1YBR221C YMR147WP40218 223 aaKnown RBP5.41□□□□□ -1.54
PDB1YBR221C CDC40P40968 455 aaPredicted RBP5.41□□□□□ -1.54
PDB1YBR221C STB2P46679 850 aa5.41□□□□□ -1.54
PDB1YBR221C YJL118WP47022 219 aa5.41□□□□□ -1.54
PDB1YBR221C DPB11P47027 764 aaPredicted RBP5.41□□□□□ -1.54
PDB1YBR221C MTR3P48240 250 aaPredicted RBP5.41□□□□□ -1.54
PDB1YBR221C ARH1P48360 493 aa5.41□□□□□ -1.54
PDB1YBR221C RAI1P53063 387 aaKnown RBP5.41□□□□□ -1.54
PDB1YBR221C YGL159WP53110 370 aa5.41□□□□□ -1.54
PDB1YBR221C MRPL50P53724 139 aa5.41□□□□□ -1.54
PDB1YBR221C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54 RIP-Chip
PDB1YBR221C YMR209CQ03648 457 aa5.41□□□□□ -1.54
PDB1YBR221C CDD1Q06549 142 aa5.41□□□□□ -1.54
PDB1YBR221C ERG11P10614 530 aa5.4□□□□□ -1.54
PDB1YBR221C FBA1P14540 359 aaKnown RBP5.4□□□□□ -1.54
PDB1YBR221C URK1P27515 501 aa5.4□□□□□ -1.54
PDB1YBR221C MEI4P29467 408 aa5.4□□□□□ -1.54
PDB1YBR221C PRE2P30656 287 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms