RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B LAM5P43560 674 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B MNP1P53163 194 aaPredicted RBP2.89□□□□□ -1.95
YFL002W-BYFL002W-B TOF1P53840 1238 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B DSL1P53847 754 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B NCS2P53923 493 aaPredicted RBP2.89□□□□□ -1.95
YFL002W-BYFL002W-B HXT11P54862 567 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B YMR155WQ03795 547 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B HSP31Q04432 237 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B CDC31P06704 161 aaKnown RBP2.88□□□□□ -1.95
YFL002W-BYFL002W-B RIP1P08067 215 aa2.88□□□□□ -1.95
YFL002W-BYFL002W-B RML2P32611 393 aa2.88□□□□□ -1.95
YFL002W-BYFL002W-B RIB5P38145 238 aa2.88□□□□□ -1.95
YFL002W-BYFL002W-B PHB2P50085 310 aa2.88□□□□□ -1.95
YFL002W-BYFL002W-B FRE4P53746 719 aa2.88□□□□□ -1.95
YFL002W-BYFL002W-B MDM30Q05930 598 aa2.88□□□□□ -1.95
YFL002W-BYFL002W-B TMC1Q08422 150 aaPredicted RBP2.88□□□□□ -1.95
YFL002W-BYFL002W-B ESA1Q08649 445 aa2.88□□□□□ -1.95
YFL002W-BYFL002W-B ISN1Q99312 450 aa2.88□□□□□ -1.95
YFL002W-BYFL002W-B ADH2P00331 348 aaKnown RBP2.87□□□□□ -1.95
YFL002W-BYFL002W-B ILV5P06168 395 aaKnown RBP2.87□□□□□ -1.95
YFL002W-BYFL002W-B SPT15P13393 240 aaKnown RBP2.87□□□□□ -1.95
YFL002W-BYFL002W-B SLY1P22213 666 aa2.87□□□□□ -1.95
YFL002W-BYFL002W-B TIP1P27654 210 aaPredicted RBP2.87□□□□□ -1.95
YFL002W-BYFL002W-B MIX23P38162 196 aa2.87□□□□□ -1.95
YFL002W-BYFL002W-B DLD2P46681 530 aaKnown RBP2.87□□□□□ -1.95
YFL002W-BYFL002W-B MRP51Q02950 344 aa2.87□□□□□ -1.95
YFL002W-BYFL002W-B SMA2Q04658 369 aa2.87□□□□□ -1.95
YFL002W-BYFL002W-B RRP12Q12754 1228 aaKnown RBP2.87□□□□□ -1.95
YFL002W-BYFL002W-B RPS8AP0CX39 200 aaKnown RBP2.86□□□□□ -1.95
YFL002W-BYFL002W-B RPS8BP0CX40 200 aaKnown RBP2.86□□□□□ -1.95
YFL002W-BYFL002W-B BEM1P29366 551 aa2.86□□□□□ -1.95
YFL002W-BYFL002W-B YEL045CP32616 141 aa2.86□□□□□ -1.95
YFL002W-BYFL002W-B PIM1P36775 1133 aa2.86□□□□□ -1.95
YFL002W-BYFL002W-B OTU2P38747 307 aaKnown RBP2.86□□□□□ -1.95
YFL002W-BYFL002W-B UTP9P38882 575 aaKnown RBP2.86□□□□□ -1.95
YFL002W-BYFL002W-B MST28P39552 234 aa2.86□□□□□ -1.95
YFL002W-BYFL002W-B PRM5P40476 318 aa2.86□□□□□ -1.95
YFL002W-BYFL002W-B RPS0BP46654 252 aaKnown RBP2.86□□□□□ -1.95
YFL002W-BYFL002W-B YLR287CQ05881 355 aa2.86□□□□□ -1.95
YFL002W-BYFL002W-B RRG1Q12167 365 aaPredicted RBP2.86□□□□□ -1.95
YFL002W-BYFL002W-B YRF1-4O13559 1382 aa2.86□□□□□ -1.95
YFL002W-BYFL002W-B LDB16P25587 256 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B CRM1P30822 1084 aaKnown RBP2.85□□□□□ -1.95
YFL002W-BYFL002W-B REC114P32841 428 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B HCS1P34243 683 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B MRPL4P36517 319 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B ARA1P38115 344 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B PTH1P38876 190 aaKnown RBP2.85□□□□□ -1.95
YFL002W-BYFL002W-B PPM1Q04081 328 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B HEL2Q05580 639 aaKnown RBP2.85□□□□□ -1.95
YFL002W-BYFL002W-B TIM18Q08749 192 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B MUM3Q08750 479 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B PKH2Q12236 1081 aaKnown RBP2.85□□□□□ -1.95
YFL002W-BYFL002W-B YLR108CQ12259 485 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B ORT1Q12375 292 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B RAD61Q99359 647 aa2.85□□□□□ -1.95
YFL002W-BYFL002W-B TRP1P00912 224 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B HHF1P02309 103 aaKnown RBP2.84□□□□□ -1.96
YFL002W-BYFL002W-B GPH1P06738 902 aaKnown RBP2.84□□□□□ -1.96
YFL002W-BYFL002W-B CLB3P24870 427 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B RHB1P25378 209 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B SIN4P32259 974 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B PAD1P33751 242 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
YFL002W-BYFL002W-B SOR1P35497 357 aaKnown RBP2.84□□□□□ -1.96
YFL002W-BYFL002W-B STB6P36085 766 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B RFC3P38629 340 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B YHR054CP38780 354 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B YHR131CP38835 850 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B LYS1P38998 373 aaRIP-Chip data2.84□□□□□ -1.96not detected
YFL002W-BYFL002W-B FAA2P39518 744 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B LSM5P40089 93 aaKnown RBP2.84□□□□□ -1.96
YFL002W-BYFL002W-B PRE5P40302 234 aaKnown RBP2.84□□□□□ -1.96
YFL002W-BYFL002W-B HMS2P47175 358 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B TIS11P47977 285 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B IBD2P53892 351 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B ADD37Q03233 198 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B VTA1Q06263 330 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B SOR2Q07786 357 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B SNX3Q08826 162 aaKnown RBP2.84□□□□□ -1.96
YFL002W-BYFL002W-B VAM3Q12241 283 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B HRT3Q12347 344 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B RTP1Q12751 981 aa2.84□□□□□ -1.96
YFL002W-BYFL002W-B SNT1P25357 1226 aa2.83□□□□□ -1.96
YFL002W-BYFL002W-B CDC60P26637 1090 aaKnown RBP2.83□□□□□ -1.96
YFL002W-BYFL002W-B BYE1P36106 594 aa2.83□□□□□ -1.96
YFL002W-BYFL002W-B MSG5P38590 489 aa2.83□□□□□ -1.96
YFL002W-BYFL002W-B MTC6P38849 526 aa2.83□□□□□ -1.96
YFL002W-BYFL002W-B ECM27P47144 725 aa2.83□□□□□ -1.96
YFL002W-BYFL002W-B BNI5P53890 448 aaKnown RBP2.83□□□□□ -1.96
YFL002W-BYFL002W-B RRG7Q08774 242 aaPredicted RBP2.83□□□□□ -1.96
YFL002W-BYFL002W-B TEF1P02994 458 aaKnown RBP2.82□□□□□ -1.96
YFL002W-BYFL002W-B CYC3P06182 269 aa2.82□□□□□ -1.96
YFL002W-BYFL002W-B FUR1P18562 216 aaKnown RBP2.82□□□□□ -1.96
YFL002W-BYFL002W-B HIR2P32480 875 aa2.82□□□□□ -1.96
YFL002W-BYFL002W-B GYP6P32806 458 aa2.82□□□□□ -1.96
YFL002W-BYFL002W-B YME2P32843 850 aa2.82□□□□□ -1.96
YFL002W-BYFL002W-B RRP4P38792 359 aaKnown RBP2.82□□□□□ -1.96
YFL002W-BYFL002W-B SSU1P41930 458 aa2.82□□□□□ -1.96
YFL002W-BYFL002W-B YGR210CP42942 411 aa2.82□□□□□ -1.96
YFL002W-BYFL002W-B VPS72Q03388 795 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms