RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W NCB2Q92317 146 aa5.59□□□□□ -1.51
VMS1YDR049W SPP41P38904 1435 aa5.59□□□□□ -1.52
VMS1YDR049W MRP10O75012 95 aa5.58□□□□□ -1.52
VMS1YDR049W ARG82P07250 355 aa5.58□□□□□ -1.52
VMS1YDR049W PEX3P28795 441 aa5.58□□□□□ -1.52
VMS1YDR049W RAD23P32628 398 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W ECM21P38167 1117 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W APD1P38281 316 aa5.58□□□□□ -1.52
VMS1YDR049W YNG2P38806 282 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W SKN7P38889 622 aa5.58□□□□□ -1.52
VMS1YDR049W PIG2P40187 538 aa5.58□□□□□ -1.52
VMS1YDR049W CDC40P40968 455 aaPredicted RBP5.58□□□□□ -1.52
VMS1YDR049W STB2P46679 850 aa5.58□□□□□ -1.52
VMS1YDR049W YJL118WP47022 219 aa5.58□□□□□ -1.52
VMS1YDR049W IRC8P47046 822 aa5.58□□□□□ -1.52
VMS1YDR049W IBA57P47158 497 aa5.58□□□□□ -1.52
VMS1YDR049W ARI1P53111 347 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W BUD9P53226 547 aa5.58□□□□□ -1.52
VMS1YDR049W PXR1P53335 271 aaPredicted RBP5.58□□□□□ -1.52
VMS1YDR049W STD1Q02794 444 aa5.58□□□□□ -1.52
VMS1YDR049W REX4Q08237 289 aa5.58□□□□□ -1.52
VMS1YDR049W RAX1Q08760 435 aa5.58□□□□□ -1.52
VMS1YDR049W YOR012WQ12351 137 aa5.58□□□□□ -1.52
VMS1YDR049W PEP1P32319 1579 aa5.58□□□□□ -1.52
VMS1YDR049W CAR1P00812 333 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W RAD3P06839 778 aa5.58□□□□□ -1.52
VMS1YDR049W RPL27AP0C2H6 136 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W RPL27BP0C2H7 136 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W MATALPHA2P0CY08 210 aa5.58□□□□□ -1.52
VMS1YDR049W HMLALPHA2P0CY09 210 aa5.58□□□□□ -1.52
VMS1YDR049W MET16P18408 261 aaPredicted RBP5.58□□□□□ -1.52
VMS1YDR049W GSY2P27472 705 aa5.58□□□□□ -1.52
VMS1YDR049W URK1P27515 501 aa5.58□□□□□ -1.52
VMS1YDR049W ECT1P33412 323 aa5.58□□□□□ -1.52
VMS1YDR049W PAD1P33751 242 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
VMS1YDR049W TIF3P34167 436 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W CHK1P38147 527 aa5.58□□□□□ -1.52
VMS1YDR049W YIL001WP40560 513 aa5.58□□□□□ -1.52
VMS1YDR049W RAI1P53063 387 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W MRP51Q02950 344 aa5.58□□□□□ -1.52
VMS1YDR049W YMR265CQ03508 461 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W HMO1Q03973 246 aaKnown RBP5.58□□□□□ -1.52
VMS1YDR049W YDR222WQ04925 415 aa5.58□□□□□ -1.52
VMS1YDR049W VPS36Q06696 566 aa5.58□□□□□ -1.52
VMS1YDR049W GPN2Q08726 347 aaPredicted RBP5.58□□□□□ -1.52
VMS1YDR049W OSW2Q12202 724 aa5.58□□□□□ -1.52
VMS1YDR049W MDS3P53094 1487 aa5.57□□□□□ -1.52
VMS1YDR049W GPH1P06738 902 aaKnown RBP5.57□□□□□ -1.52
VMS1YDR049W KRS1P15180 591 aaKnown RBP5.57□□□□□ -1.52
VMS1YDR049W PRR1P28708 518 aa5.57□□□□□ -1.52
VMS1YDR049W MAE1P36013 669 aaKnown RBP5.57□□□□□ -1.52
VMS1YDR049W DOA1P36037 715 aa5.57□□□□□ -1.52
VMS1YDR049W ASC1P38011 319 aaKnown RBP5.57□□□□□ -1.52
VMS1YDR049W EHT1P38295 451 aa5.57□□□□□ -1.52
VMS1YDR049W FMP33P46998 180 aa5.57□□□□□ -1.52
VMS1YDR049W SSY5P47002 699 aa5.57□□□□□ -1.52
VMS1YDR049W DPB11P47027 764 aaPredicted RBP5.57□□□□□ -1.52
VMS1YDR049W MTR3P48240 250 aaPredicted RBP5.57□□□□□ -1.52
VMS1YDR049W ASN2P49090 572 aaKnown RBP5.57□□□□□ -1.52
VMS1YDR049W VAC7P53950 1165 aa5.57□□□□□ -1.52
VMS1YDR049W MRS2Q01926 470 aa5.57□□□□□ -1.52
VMS1YDR049W THI7Q05998 598 aa5.57□□□□□ -1.52
VMS1YDR049W DCS1Q06151 350 aa5.57□□□□□ -1.52
VMS1YDR049W ARO10Q06408 635 aa5.57□□□□□ -1.52
VMS1YDR049W RPP1AP05318 106 aaPredicted RBP5.56□□□□□ -1.52
VMS1YDR049W ABF1P14164 731 aa5.56□□□□□ -1.52
VMS1YDR049W VMA16P23968 213 aa5.56□□□□□ -1.52
VMS1YDR049W RPS5P26783 225 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W YIM1P28625 365 aa5.56□□□□□ -1.52
VMS1YDR049W UGP1P32861 499 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W RPC25P35718 212 aa5.56□□□□□ -1.52
VMS1YDR049W SAP1P39955 897 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W YMR147WP40218 223 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W YIL108WP40483 696 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W YAR1P46683 200 aa5.56□□□□□ -1.52
VMS1YDR049W IPI3P53877 555 aa5.56□□□□□ -1.52
VMS1YDR049W VPS60Q03390 229 aa5.56□□□□□ -1.52
VMS1YDR049W ASM4Q05166 528 aa5.56□□□□□ -1.52
VMS1YDR049W CDD1Q06549 142 aa5.56□□□□□ -1.52
VMS1YDR049W PAM18Q07914 168 aa5.56□□□□□ -1.52
VMS1YDR049W SDO1Q07953 250 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W YOL075CQ08234 1294 aa5.56□□□□□ -1.52
VMS1YDR049W SGO1Q08490 590 aa5.56□□□□□ -1.52
VMS1YDR049W GEP3Q08622 556 aa5.56□□□□□ -1.52
VMS1YDR049W PAA1Q12447 191 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W YDL007C-AQ2V2Q0 85 aa5.56□□□□□ -1.52
VMS1YDR049W RHO1P06780 209 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W CDC33P07260 213 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W LRE1P25579 583 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W YPS1P32329 569 aa5.56□□□□□ -1.52
VMS1YDR049W FRE1P32791 686 aa5.56□□□□□ -1.52
VMS1YDR049W EMP70P32802 667 aa5.56□□□□□ -1.52
VMS1YDR049W MRPL16P38064 232 aa5.56□□□□□ -1.52
VMS1YDR049W MNN2P38069 597 aa5.56□□□□□ -1.52
VMS1YDR049W YEL020CP39994 560 aa5.56□□□□□ -1.52
VMS1YDR049W LSM1P47017 172 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W TNA1P53322 534 aa5.56□□□□□ -1.52
VMS1YDR049W YDR541CQ03049 344 aa5.56□□□□□ -1.52
VMS1YDR049W YRA1Q12159 226 aaKnown RBP5.56□□□□□ -1.52
VMS1YDR049W YOR029WQ12243 111 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms