RNA–Protein interactions for RNA: YOL027C

MDM38, Transcript of Mitochondrial protein, yeast

Gene MDM38, Length 1,722 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDM38	YOL027C	CLN1	P20437	546 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	MSN2	P33748	704 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	ARA1	P38115	344 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	TOM22	P49334	152 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	RPT4	P53549	437 aa	Known RBP	4.24	□□□□□ -1.73
MDM38	YOL027C	VTC3	Q02725	835 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	SHR3	Q02774	210 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	RSC9	Q03124	581 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	CUE5	Q08412	411 aa	Known RBP	4.24	□□□□□ -1.73
MDM38	YOL027C	APL5	Q08951	932 aa	Known RBP	4.24	□□□□□ -1.73
MDM38	YOL027C	VPS54	Q12071	889 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	NFI1	Q12216	726 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	VAM3	Q12241	283 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	BRR1	Q99177	341 aa	Predicted RBP	4.24	□□□□□ -1.73
MDM38	YOL027C	YPK9	Q12697	1472 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	NUP170	P38181	1502 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	DNA2	P38859	1522 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	YOR1	P53049	1477 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	RIP1	P08067	215 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	LPD1	P09624	499 aa	Known RBP	4.24	□□□□□ -1.73
MDM38	YOL027C	GEX1	P25596	615 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	SWH1	P35845	1188 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	DUG2	P38149	878 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	EOS1	P53938	366 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	ORM2	Q06144	216 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	RDR1	Q08904	546 aa		4.24	□□□□□ -1.73
MDM38	YOL027C	BUD4	P47136	1447 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	STH1	P32597	1359 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	SUC2	P00724	532 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	ERG11	P10614	530 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	HOM2	P13663	365 aa	Known RBP	4.23	□□□□□ -1.73
MDM38	YOL027C	TYR1	P20049	452 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	SNO3	P43544	222 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	OCA1	P50946	238 aa	Predicted RBP	4.23	□□□□□ -1.73
MDM38	YOL027C	ZPR1	P53303	486 aa	Known RBP	4.23	□□□□□ -1.73
MDM38	YOL027C	COP1	P53622	1201 aa	Known RBP	4.23	□□□□□ -1.73
MDM38	YOL027C	RHO4	Q00246	291 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	YPL014W	Q02606	381 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	CTL1	Q03220	320 aa	Known RBP	4.23	□□□□□ -1.73
MDM38	YOL027C	PRP42	Q03776	544 aa	Known RBP	4.23	□□□□□ -1.73
MDM38	YOL027C	YMR130W	Q04223	302 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
MDM38	YOL027C	CFT2	Q12102	859 aa	Predicted RBP	4.23	□□□□□ -1.73
MDM38	YOL027C	MED2	Q12124	431 aa		4.23	□□□□□ -1.73
MDM38	YOL027C	MON2	P48563	1636 aa	Predicted RBP	4.22	□□□□□ -1.73
MDM38	YOL027C	SPO7	P18410	259 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	ATP10	P18496	279 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	RPS2	P25443	254 aa	Known RBP	4.22	□□□□□ -1.73
MDM38	YOL027C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
MDM38	YOL027C	BRF1	P29056	596 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	SNC1	P31109	117 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	ATP11	P32453	318 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	HIR2	P32480	875 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	TOM71	P38825	639 aa	Known RBP	4.22	□□□□□ -1.73
MDM38	YOL027C	YJL132W	P47014	750 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	NUP100	Q02629	959 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	POS5	Q06892	414 aa		4.22	□□□□□ -1.73
MDM38	YOL027C	KEL3	Q08979	651 aa	Predicted RBP	4.22	□□□□□ -1.73
MDM38	YOL027C	KRE2	P27809	442 aa		4.21	□□□□□ -1.73
MDM38	YOL027C	TFG2	P41896	400 aa	Predicted RBP	4.21	□□□□□ -1.73
MDM38	YOL027C	VPS25	P47142	202 aa		4.21	□□□□□ -1.73
MDM38	YOL027C	RMD9	P53140	646 aa	Known RBP	4.21	□□□□□ -1.73
MDM38	YOL027C	DCS1	Q06151	350 aa		4.21	□□□□□ -1.73
MDM38	YOL027C	RKM1	Q08961	583 aa	Predicted RBP	4.21	□□□□□ -1.73
MDM38	YOL027C	PAN1	P32521	1480 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	YPR089W	O13585	888 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	BAR1	P12630	587 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	SEC63	P14906	663 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	SRV2	P17555	526 aa	Known RBP	4.21	□□□□□ -1.74
MDM38	YOL027C	MCM4	P30665	933 aa	Known RBP	4.21	□□□□□ -1.74
MDM38	YOL027C	GYP6	P32806	458 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	LAS1	P36146	502 aa	Predicted RBP	4.21	□□□□□ -1.74
MDM38	YOL027C	VHC1	P38329	1120 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	VRG4	P40107	337 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	SYG1	P40528	902 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	CFD1	P40558	293 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	YPT11	P48559	417 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	ALT2	P52892	507 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	SSK1	Q07084	712 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	AEP3	Q12089	606 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	HSP42	Q12329	375 aa		4.21	□□□□□ -1.74
MDM38	YOL027C	SNQ2	P32568	1501 aa	Known RBP	4.2	□□□□□ -1.74
MDM38	YOL027C	RKR1	Q04781	1562 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	MSP1	P28737	362 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	SIN4	P32259	974 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	MMS4	P38257	691 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	RFC3	P38629	340 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	VHS2	P40463	436 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	TOF1	P53840	1238 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	SMA1	Q02651	245 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	MDM30	Q05930	598 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	DIC1	Q06143	298 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	YLR456W	Q06199	204 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	DIS3	Q08162	1001 aa	Known RBP	4.2	□□□□□ -1.74
MDM38	YOL027C	YLR112W	Q12130	139 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	CRC1	Q12289	327 aa		4.2	□□□□□ -1.74
MDM38	YOL027C	PGK1	P00560	416 aa	Known RBP	4.19	□□□□□ -1.74
MDM38	YOL027C	YML002W	P0CF17	737 aa		4.19	□□□□□ -1.74
MDM38	YOL027C	VMA2	P16140	517 aa	Known RBP	4.19	□□□□□ -1.74
MDM38	YOL027C	GID7	P25569	745 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms