RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C SAS3P34218 831 aa2.13□□□□□ -2.07
VPS35YJL154C MTR2P34232 184 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C HCS1P34243 683 aa2.13□□□□□ -2.07
VPS35YJL154C PCL6P40038 420 aa2.13□□□□□ -2.07
VPS35YJL154C AZF1P41696 914 aa2.13□□□□□ -2.07
VPS35YJL154C RPS10BP46784 105 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C PYK2P52489 506 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C ALT2P52892 507 aa2.13□□□□□ -2.07
VPS35YJL154C ESBP6P53918 673 aa2.13□□□□□ -2.07
VPS35YJL154C BET4Q00618 327 aa2.13□□□□□ -2.07
VPS35YJL154C MSS11Q03825 758 aa2.13□□□□□ -2.07
VPS35YJL154C YMR034CQ05131 434 aaPredicted RBP2.13□□□□□ -2.07
VPS35YJL154C RQC1Q05468 723 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C COQ9Q05779 260 aa2.13□□□□□ -2.07
VPS35YJL154C VTA1Q06263 330 aa2.13□□□□□ -2.07
VPS35YJL154C CAR1P00812 333 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C SEC62P21825 274 aa2.13□□□□□ -2.07
VPS35YJL154C RAD14P28519 371 aa2.13□□□□□ -2.07
VPS35YJL154C ERG3P32353 365 aa2.13□□□□□ -2.07
VPS35YJL154C NPL6P32832 435 aa2.13□□□□□ -2.07
VPS35YJL154C VPS17P32913 551 aa2.13□□□□□ -2.07
VPS35YJL154C FET5P43561 622 aa2.13□□□□□ -2.07
VPS35YJL154C OCA1P50946 238 aaPredicted RBP2.13□□□□□ -2.07
VPS35YJL154C RMD9P53140 646 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C JJJ1P53863 590 aa2.13□□□□□ -2.07
VPS35YJL154C FMP45Q07651 309 aa2.13□□□□□ -2.07
VPS35YJL154C RTT109Q07794 436 aa2.13□□□□□ -2.07
VPS35YJL154C MLH2Q07980 695 aa2.13□□□□□ -2.07
VPS35YJL154C ERP4Q12450 207 aa2.13□□□□□ -2.07
VPS35YJL154C ULS1Q08562 1619 aa2.13□□□□□ -2.07
VPS35YJL154C TY1B-JR2P47100 1755 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C TY1B-ER2Q03619 1755 aa2.13□□□□□ -2.07
VPS35YJL154C TY1B-MR1Q04214 1755 aa2.13□□□□□ -2.07
VPS35YJL154C TY1B-MR2Q04670 1755 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C TY1B-LR1Q12088 1755 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C TY1B-NL1Q12112 1755 aa2.13□□□□□ -2.07
VPS35YJL154C TY1B-GR1Q12141 1755 aa2.13□□□□□ -2.07
VPS35YJL154C TY1B-BLQ12490 1755 aa2.13□□□□□ -2.07
VPS35YJL154C SPS4P09937 338 aa2.13□□□□□ -2.07
VPS35YJL154C TYR1P20049 452 aa2.13□□□□□ -2.07
VPS35YJL154C IDH2P28241 369 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C RAD24P32641 659 aa2.13□□□□□ -2.07
VPS35YJL154C RPS0AP32905 252 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C APE3P37302 537 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C NTC20P38302 140 aaPredicted RBP2.13□□□□□ -2.07
VPS35YJL154C YHR210CP38893 341 aa2.13□□□□□ -2.07
VPS35YJL154C YJL068CP40363 299 aa2.13□□□□□ -2.07
VPS35YJL154C YIL169CP40442 995 aa2.13□□□□□ -2.07
VPS35YJL154C PKP2P53170 491 aa2.13□□□□□ -2.07
VPS35YJL154C ZPR1P53303 486 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C TDA7P53882 636 aaPredicted RBP2.13□□□□□ -2.07
VPS35YJL154C RMT2Q03305 412 aa2.13□□□□□ -2.07
VPS35YJL154C SXM1Q04175 944 aaKnown RBP2.13□□□□□ -2.07
VPS35YJL154C IVY1Q04934 453 aa2.13□□□□□ -2.07
VPS35YJL154C GRX6Q12438 231 aa2.13□□□□□ -2.07
VPS35YJL154C YRF1-2P40105 1681 aa2.12□□□□□ -2.07
VPS35YJL154C EXO70P19658 623 aa2.12□□□□□ -2.07
VPS35YJL154C PPH22P23595 377 aa2.12□□□□□ -2.07
VPS35YJL154C YPT53P36019 220 aa2.12□□□□□ -2.07
VPS35YJL154C RSM22P36056 628 aa2.12□□□□□ -2.07
VPS35YJL154C RKM3P38222 552 aa2.12□□□□□ -2.07
VPS35YJL154C BUD32P53323 261 aa2.12□□□□□ -2.07
VPS35YJL154C NUP100Q02629 959 aa2.12□□□□□ -2.07
VPS35YJL154C DIG1Q03063 452 aaKnown RBP2.12□□□□□ -2.07
VPS35YJL154C FMP42Q04991 504 aa2.12□□□□□ -2.07
VPS35YJL154C DIC1Q06143 298 aa2.12□□□□□ -2.07
VPS35YJL154C NRT1Q08485 598 aa2.12□□□□□ -2.07
VPS35YJL154C CSR2Q12734 1121 aa2.12□□□□□ -2.07
VPS35YJL154C SMC6Q12749 1114 aa2.12□□□□□ -2.07
VPS35YJL154C RHO2P06781 192 aa2.12□□□□□ -2.07
VPS35YJL154C PDX1P16451 410 aa2.12□□□□□ -2.07
VPS35YJL154C YCP4P25349 247 aaKnown RBP2.12□□□□□ -2.07
VPS35YJL154C RPN2P32565 945 aaKnown RBP2.12□□□□□ -2.07
VPS35YJL154C BZZ1P38822 633 aa2.12□□□□□ -2.07
VPS35YJL154C MBB1P39534 108 aa2.12□□□□□ -2.07
VPS35YJL154C DLD2P46681 530 aaKnown RBP2.12□□□□□ -2.07
VPS35YJL154C YGR149WP48236 432 aa2.12□□□□□ -2.07
VPS35YJL154C MPS1P54199 764 aa2.12□□□□□ -2.07
VPS35YJL154C MSC1Q03104 513 aa2.12□□□□□ -2.07
VPS35YJL154C YMR254CQ04838 102 aa2.12□□□□□ -2.07
VPS35YJL154C PRP2P20095 876 aaPredicted RBP2.11□□□□□ -2.07
VPS35YJL154C CDC60P26637 1090 aaKnown RBP2.11□□□□□ -2.07
VPS35YJL154C VMA8P32610 256 aaKnown RBP2.11□□□□□ -2.07
VPS35YJL154C PEX5P35056 612 aa2.11□□□□□ -2.07
VPS35YJL154C CAB3P36076 571 aa2.11□□□□□ -2.07
VPS35YJL154C ARA1P38115 344 aa2.11□□□□□ -2.07
VPS35YJL154C ARC40P38328 384 aaKnown RBP2.11□□□□□ -2.07
VPS35YJL154C MET30P39014 640 aa2.11□□□□□ -2.07
VPS35YJL154C ELP2P42935 788 aa2.11□□□□□ -2.07
VPS35YJL154C AIM22P47051 409 aa2.11□□□□□ -2.07
VPS35YJL154C URB2P47108 1174 aa2.11□□□□□ -2.07
VPS35YJL154C FMS1P50264 508 aa2.11□□□□□ -2.07
VPS35YJL154C ART5P53244 586 aaKnown RBP2.11□□□□□ -2.07
VPS35YJL154C GPI1P53306 609 aa2.11□□□□□ -2.07
VPS35YJL154C HEF3P53978 1044 aaKnown RBP2.11□□□□□ -2.07
VPS35YJL154C RHO4Q00246 291 aa2.11□□□□□ -2.07
VPS35YJL154C RRP45Q05636 305 aaKnown RBP2.11□□□□□ -2.07
VPS35YJL154C YEH2Q07950 538 aa2.11□□□□□ -2.07
VPS35YJL154C BSC1Q12140 328 aa2.11□□□□□ -2.07
VPS35YJL154C LSP1Q12230 341 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms