RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	ECM25	P32525	599 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	RPC34	P32910	317 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	PCH2	P38126	564 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	ASN2	P49090	572 aa	Known RBP	4.66	□□□□□ -1.66
UBC1	YDR177W	YNL143C	P53908	130 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	PRO2	P54885	456 aa	Known RBP	4.66	□□□□□ -1.66
UBC1	YDR177W	YVH1	Q02256	364 aa	Known RBP	4.66	□□□□□ -1.66
UBC1	YDR177W	YDL057W	Q07379	328 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	RUP1	Q12242	671 aa		4.66	□□□□□ -1.66
UBC1	YDR177W	XRN1	P22147	1528 aa	Known RBP	4.66	□□□□□ -1.66
UBC1	YDR177W	ECM5	Q03214	1411 aa		4.65	□□□□□ -1.66
UBC1	YDR177W	ILV5	P06168	395 aa	Known RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	SAM1	P10659	382 aa	Known RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	KIN3	P22209	435 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	YJU2	P28320	278 aa	Predicted RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	BEM1	P29366	551 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	HSP104	P31539	908 aa	Known RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	EFM2	P38347	419 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	TIF5	P38431	405 aa	Known RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	ANS1	P38832	159 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	ULP2	P40537	1034 aa	Predicted RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	YFR016C	P43597	1233 aa	Known RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	SNG1	P46950	547 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	AIM22	P47051	409 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	ECM27	P47144	725 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	ASN1	P49089	572 aa	Known RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	ORC5	P50874	479 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	PIB2	P53191	635 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	HEF3	P53978	1044 aa	Known RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	MRPL1	Q04599	285 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	NDL1	Q06568	189 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	RAD34	Q06665	692 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
UBC1	YDR177W	RRP36	Q12481	300 aa	Predicted RBP	4.65	□□□□□ -1.67
UBC1	YDR177W	RAD61	Q99359	647 aa		4.65	□□□□□ -1.67
UBC1	YDR177W	RPN13	O13563	156 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	ERG11	P10614	530 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	HOM2	P13663	365 aa	Known RBP	4.64	□□□□□ -1.67
UBC1	YDR177W	CLB2	P24869	491 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	YCR006C	P25350	157 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	RDS1	P25611	832 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	VPS17	P32913	551 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	STV1	P37296	890 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	BNA4	P38169	460 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	KAP104	P38217	918 aa	Known RBP	4.64	□□□□□ -1.67
UBC1	YDR177W	APD1	P38281	316 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	TOM71	P38825	639 aa	Known RBP	4.64	□□□□□ -1.67
UBC1	YDR177W	YHR210C	P38893	341 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	MIT1	P40002	666 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	ELP2	P42935	788 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	NMD5	P46970	1048 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	YJL043W	P47053	257 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	UBP8	P50102	471 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	SHE10	P53075	577 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	RRP46	P53256	223 aa	Predicted RBP	4.64	□□□□□ -1.67
UBC1	YDR177W	SMA1	Q02651	245 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	MSC1	Q03104	513 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	ATG26	Q06321	1198 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	BUG1	Q12191	341 aa		4.64	□□□□□ -1.67
UBC1	YDR177W	SSN2	P38931	1420 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	RIP1	P08067	215 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	GAL7	P08431	366 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	SGV1	P23293	657 aa	Known RBP	4.63	□□□□□ -1.67
UBC1	YDR177W	SAT4	P25333	603 aa	Known RBP	4.63	□□□□□ -1.67
UBC1	YDR177W	CTS1	P29029	562 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	CRM1	P30822	1084 aa	Known RBP	4.63	□□□□□ -1.67
UBC1	YDR177W	ASC1	P38011	319 aa	Known RBP	4.63	□□□□□ -1.67
UBC1	YDR177W	ROT2	P38138	954 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	PCF11	P39081	626 aa	Predicted RBP	4.63	□□□□□ -1.67
UBC1	YDR177W	SSO2	P39926	295 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	POP1	P41812	875 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	YPR003C	P53394	754 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	OCA2	P53949	197 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	SHR3	Q02774	210 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	PHO92	Q06390	306 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	MCH4	Q08268	501 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	RKM1	Q08961	583 aa	Predicted RBP	4.63	□□□□□ -1.67
UBC1	YDR177W	CEX1	Q12453	761 aa		4.63	□□□□□ -1.67
UBC1	YDR177W	CBP2	P03874	630 aa	Predicted RBP	4.62	□□□□□ -1.67
UBC1	YDR177W	PEP4	P07267	405 aa	Known RBP	4.62	□□□□□ -1.67
UBC1	YDR177W	RPB8	P20436	146 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	ELO2	P25358	347 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	PET18	P25362	215 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	RHB1	P25378	209 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	PPQ1	P32945	549 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	TRM2	P33753	639 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	MTR2	P34232	184 aa	Known RBP	4.62	□□□□□ -1.67
UBC1	YDR177W	OCT1	P35999	772 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	SMC2	P38989	1170 aa	Known RBP	4.62	□□□□□ -1.67
UBC1	YDR177W	EFM3	P47163	339 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	BRO1	P48582	844 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	ZPR1	P53303	486 aa	Known RBP	4.62	□□□□□ -1.67
UBC1	YDR177W	CWC22	P53333	577 aa	Known RBP	4.62	□□□□□ -1.67
UBC1	YDR177W	YTP1	P53584	459 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	SLG1	P54867	378 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	RRN5	Q02983	363 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	YMR206W	Q03695	313 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	SWF1	Q04629	336 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	PDR8	Q06149	701 aa		4.62	□□□□□ -1.67
UBC1	YDR177W	YOL159C	Q08300	171 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms