RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W DRS1P32892 752 aaKnown RBP11.65□□□□□ -0.54
UBC1YDR177W MTC1P47018 478 aaKnown RBP10.77□□□□□ -0.69
UBC1YDR177W BFR2Q06631 534 aaKnown RBP10.46□□□□□ -0.73
UBC1YDR177W TFA1P36100 482 aa10.35□□□□□ -0.75
UBC1YDR177W RQC2Q12532 1038 aaKnown RBP9.92□□□□□ -0.82
UBC1YDR177W AVT3P36062 692 aa9.67□□□□□ -0.86
UBC1YDR177W DIP2Q12220 943 aaPredicted RBP9.62□□□□□ -0.87
UBC1YDR177W TAF7Q05021 590 aa8.96□□□□□ -0.98
UBC1YDR177W RSE1Q04693 1361 aaKnown RBP8.92□□□□□ -0.98
UBC1YDR177W DMA1P38823 416 aa8.81□□□□□ -1
UBC1YDR177W ISW2Q08773 1120 aa8.68□□□□□ -1.02
UBC1YDR177W LEO1P38439 464 aa8.55□□□□□ -1.04
UBC1YDR177W PTP3P40048 928 aa8.51□□□□□ -1.05
UBC1YDR177W RPL17AP05740 184 aaKnown RBP8.5□□□□□ -1.05
UBC1YDR177W RPL17BP46990 184 aaKnown RBP8.5□□□□□ -1.05
UBC1YDR177W RPG1P38249 964 aaKnown RBP8.45□□□□□ -1.06
UBC1YDR177W REB1P21538 810 aa8.4□□□□□ -1.06
UBC1YDR177W SSP1P38871 571 aa8.32□□□□□ -1.08
UBC1YDR177W RIM101P33400 625 aa8.26□□□□□ -1.09
UBC1YDR177W FAP1P53971 965 aa8.23□□□□□ -1.09
UBC1YDR177W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
UBC1YDR177W LEU3P08638 886 aa8.2□□□□□ -1.1
UBC1YDR177W PRI1P10363 409 aa8.18□□□□□ -1.1
UBC1YDR177W SPT21P35209 758 aa8.16□□□□□ -1.1
UBC1YDR177W SAS10Q12136 610 aaPredicted RBP8.09□□□□□ -1.11
UBC1YDR177W YIL055CP40523 627 aaKnown RBP8.04□□□□□ -1.12
UBC1YDR177W YAH1Q12184 172 aaKnown RBP8.04□□□□□ -1.12
UBC1YDR177W OXP1P28273 1286 aa7.97□□□□□ -1.13
UBC1YDR177W AAD16Q02895 342 aa7.97□□□□□ -1.13
UBC1YDR177W RPN1P38764 993 aaKnown RBP7.95□□□□□ -1.14
UBC1YDR177W MGA2P40578 1113 aa7.95□□□□□ -1.14
UBC1YDR177W YLR271WQ06152 274 aa7.93□□□□□ -1.14
UBC1YDR177W RSM7P47150 247 aa7.84□□□□□ -1.15
UBC1YDR177W PRY3P47033 881 aa7.82□□□□□ -1.16
UBC1YDR177W DMA2P53924 522 aa7.8□□□□□ -1.16
UBC1YDR177W TSR3Q12094 313 aaKnown RBP7.79□□□□□ -1.16
UBC1YDR177W SPB4P25808 606 aaPredicted RBP7.76□□□□□ -1.17
UBC1YDR177W CKB1P43639 278 aa7.76□□□□□ -1.17
UBC1YDR177W RLF2Q12495 606 aa7.75□□□□□ -1.17
UBC1YDR177W IFH1P39520 1085 aa7.73□□□□□ -1.17
UBC1YDR177W YKR023WP36119 530 aaKnown RBP7.71□□□□□ -1.18
UBC1YDR177W CST9Q06032 482 aa7.7□□□□□ -1.18
UBC1YDR177W HGH1P48362 394 aaKnown RBP7.69□□□□□ -1.18
UBC1YDR177W SET1P38827 1080 aaKnown RBP7.64□□□□□ -1.19
UBC1YDR177W PSD2P53037 1138 aaKnown RBP7.64□□□□□ -1.19
UBC1YDR177W AI2P03876 854 aa7.63□□□□□ -1.19
UBC1YDR177W BBC1P47068 1157 aa7.63□□□□□ -1.19
UBC1YDR177W VPS70P47161 811 aa7.63□□□□□ -1.19
UBC1YDR177W YPR148CQ06523 435 aa7.62□□□□□ -1.19
UBC1YDR177W MRPL32P25348 183 aa7.6□□□□□ -1.19
UBC1YDR177W TFC8Q12308 588 aa7.6□□□□□ -1.19
UBC1YDR177W HOP09932 586 aa7.57□□□□□ -1.2
UBC1YDR177W RAM2P29703 316 aa7.55□□□□□ -1.2
UBC1YDR177W DSF2P38213 736 aa7.52□□□□□ -1.21
UBC1YDR177W YNR021WP53723 404 aaKnown RBP7.52□□□□□ -1.21
UBC1YDR177W PBS2P08018 668 aa7.49□□□□□ -1.21
UBC1YDR177W KIN1P13185 1064 aa7.49□□□□□ -1.21
UBC1YDR177W DCD1P06773 312 aa7.45□□□□□ -1.22
UBC1YDR177W ABP1P15891 592 aaKnown RBP7.45□□□□□ -1.22
UBC1YDR177W MAK11P20484 414 aaKnown RBP7.45□□□□□ -1.22
UBC1YDR177W AIM7Q12156 149 aa7.45□□□□□ -1.22
UBC1YDR177W RTG3P38165 486 aa7.44□□□□□ -1.22
UBC1YDR177W MRM1P25270 412 aa7.43□□□□□ -1.22
UBC1YDR177W YCK3P39962 524 aa7.43□□□□□ -1.22
UBC1YDR177W MAM3Q12296 706 aa7.43□□□□□ -1.22
UBC1YDR177W BCH2P36122 765 aa7.39□□□□□ -1.23
UBC1YDR177W MAK21Q12176 1025 aaKnown RBP7.39□□□□□ -1.23
UBC1YDR177W AIM44Q99299 758 aa7.39□□□□□ -1.23
UBC1YDR177W NOP53Q12080 455 aaKnown RBP7.38□□□□□ -1.23
UBC1YDR177W GLC3P32775 704 aa7.37□□□□□ -1.23
UBC1YDR177W EPS1P40557 701 aa7.36□□□□□ -1.23
UBC1YDR177W REF2P42073 533 aaPredicted RBP7.35□□□□□ -1.23
UBC1YDR177W RCR1P38212 213 aa7.34□□□□□ -1.23
UBC1YDR177W IES2P40154 320 aa7.34□□□□□ -1.23
UBC1YDR177W CDC27P38042 758 aa7.33□□□□□ -1.24
UBC1YDR177W ATF2P53296 535 aa7.33□□□□□ -1.24
UBC1YDR177W HAA1Q12753 694 aaKnown RBP7.32□□□□□ -1.24
UBC1YDR177W COQ8P27697 501 aa7.31□□□□□ -1.24
UBC1YDR177W HPC2Q01448 625 aa7.29□□□□□ -1.24
UBC1YDR177W BDF1P35817 686 aa7.27□□□□□ -1.25
UBC1YDR177W BRL1P38770 471 aa7.27□□□□□ -1.25
UBC1YDR177W GUA1P38625 525 aaKnown RBP7.26□□□□□ -1.25
UBC1YDR177W NUP42P49686 430 aaKnown RBP7.25□□□□□ -1.25
UBC1YDR177W DIT2P21595 489 aa7.24□□□□□ -1.25
UBC1YDR177W SSA1P10591 642 aaKnown RBP7.23□□□□□ -1.25
UBC1YDR177W MIF2P35201 549 aa7.23□□□□□ -1.25
UBC1YDR177W COX6P00427 148 aa7.22□□□□□ -1.25
UBC1YDR177W SSA2P10592 639 aaKnown RBP7.22□□□□□ -1.25
UBC1YDR177W GEF1P37020 779 aa7.2□□□□□ -1.26
UBC1YDR177W YML020WQ03722 664 aa7.2□□□□□ -1.26
UBC1YDR177W YMR1P47147 688 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
UBC1YDR177W VPS29P38759 282 aa7.18□□□□□ -1.26
UBC1YDR177W TFB3Q03290 321 aa7.18□□□□□ -1.26
UBC1YDR177W SLX8P40072 274 aa7.17□□□□□ -1.26
UBC1YDR177W SCY1P53009 804 aa7.15□□□□□ -1.26
UBC1YDR177W SSA4P22202 642 aaKnown RBP7.13□□□□□ -1.27
UBC1YDR177W KIC1P38692 1080 aa7.13□□□□□ -1.27
UBC1YDR177W NOP8Q08287 484 aaPredicted RBP7.13□□□□□ -1.27
UBC1YDR177W RPL34BP40525 121 aaKnown RBP7.12□□□□□ -1.27
UBC1YDR177W SUB2Q07478 446 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms