RNA–Protein interactions for RNA: YPR030W

CSR2, Transcript of Nuclear ubiquitin protein ligase binding protein, yeastyeast

Gene CSR2, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cellular bud, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSR2YPR030W PCT1P13259 424 aa3.94□□□□□ -1.78
CSR2YPR030W USO1P25386 1790 aa3.94□□□□□ -1.78
CSR2YPR030W NUP188P52593 1655 aaKnown RBP3.94□□□□□ -1.78
CSR2YPR030W SCT1P32784 759 aa3.94□□□□□ -1.78
CSR2YPR030W CHZ1P40019 153 aaPredicted RBP3.94□□□□□ -1.78
CSR2YPR030W PDS5Q04264 1277 aa3.94□□□□□ -1.78
CSR2YPR030W RVB2Q12464 471 aaKnown RBP3.94□□□□□ -1.78
CSR2YPR030W NOP7P53261 605 aaKnown RBP3.93□□□□□ -1.78
CSR2YPR030W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
CSR2YPR030W DIP2Q12220 943 aaPredicted RBP3.93□□□□□ -1.78
CSR2YPR030W MSP1P28737 362 aa3.93□□□□□ -1.78
CSR2YPR030W PIL1P53252 339 aaKnown RBP3.93□□□□□ -1.78
CSR2YPR030W BUD3P25558 1636 aa3.92□□□□□ -1.78
CSR2YPR030W VPS24P36095 224 aaKnown RBP3.92□□□□□ -1.78
CSR2YPR030W RIX1P38883 763 aaPredicted RBP3.92□□□□□ -1.78
CSR2YPR030W FPR3P38911 411 aaKnown RBP3.91□□□□□ -1.78
CSR2YPR030W YRF1-1P0CX20 1796 aa3.91□□□□□ -1.78
CSR2YPR030W YRF1-5P0CX21 1796 aa3.91□□□□□ -1.78
CSR2YPR030W YRF1-8P0CX22 1796 aa3.91□□□□□ -1.78
CSR2YPR030W SIR4P11978 1358 aa3.91□□□□□ -1.78
CSR2YPR030W RRP5Q05022 1729 aaKnown RBP3.91□□□□□ -1.78
CSR2YPR030W ORC1P54784 914 aaPredicted RBP3.91□□□□□ -1.78
CSR2YPR030W SEC7P11075 2009 aaKnown RBP3.9□□□□□ -1.78
CSR2YPR030W NST1P53935 1240 aa3.9□□□□□ -1.78
CSR2YPR030W KNS1P32350 737 aaPredicted RBP3.9□□□□□ -1.79
CSR2YPR030W RPN1P38764 993 aaKnown RBP3.9□□□□□ -1.79
CSR2YPR030W NOP58Q12499 511 aaKnown RBP3.9□□□□□ -1.79
CSR2YPR030W CTR9P89105 1077 aa3.89□□□□□ -1.79
CSR2YPR030W APC1P53886 1748 aa3.89□□□□□ -1.79
CSR2YPR030W RPS0BP46654 252 aaKnown RBP3.89□□□□□ -1.79
CSR2YPR030W HAP5Q02516 242 aa3.89□□□□□ -1.79
CSR2YPR030W AIM44Q99299 758 aa3.88□□□□□ -1.79
CSR2YPR030W LEU3P08638 886 aa3.88□□□□□ -1.79
CSR2YPR030W SUI2P20459 304 aaKnown RBP3.87□□□□□ -1.79
CSR2YPR030W BUD27P43573 796 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
CSR2YPR030W DMA2P53924 522 aa3.87□□□□□ -1.79
CSR2YPR030W DUR1,2P32528 1835 aaKnown RBP3.87□□□□□ -1.79
CSR2YPR030W DRS2P39524 1355 aa3.87□□□□□ -1.79
CSR2YPR030W NUG1P40010 520 aaKnown RBP3.87□□□□□ -1.79
CSR2YPR030W TEA1P47988 759 aa3.86□□□□□ -1.79
CSR2YPR030W ROM2P51862 1356 aaKnown RBP3.86□□□□□ -1.79
CSR2YPR030W KIP3P53086 805 aaKnown RBP3.86□□□□□ -1.79
CSR2YPR030W SMC3P47037 1230 aa3.86□□□□□ -1.79
CSR2YPR030W RAD9P14737 1309 aa3.85□□□□□ -1.79
CSR2YPR030W KRE5P22023 1365 aa3.85□□□□□ -1.79
CSR2YPR030W ARL1P38116 183 aaKnown RBP3.85□□□□□ -1.79
CSR2YPR030W AUS1Q08409 1394 aa3.85□□□□□ -1.79
CSR2YPR030W KRE33P53914 1056 aaKnown RBP3.85□□□□□ -1.79
CSR2YPR030W TY1B-NL2Q99337 1749 aaKnown RBP3.84□□□□□ -1.79
CSR2YPR030W YRF1-2P40105 1681 aa3.84□□□□□ -1.79
CSR2YPR030W ESL2P36168 1195 aa3.84□□□□□ -1.79
CSR2YPR030W YDL144CQ07589 356 aa3.84□□□□□ -1.79
CSR2YPR030W BUD21Q08492 214 aaPredicted RBP3.84□□□□□ -1.79
CSR2YPR030W BCK1Q01389 1478 aa3.84□□□□□ -1.8
CSR2YPR030W MPE1P35728 441 aaKnown RBP3.83□□□□□ -1.8
CSR2YPR030W CIN4P39110 191 aa3.83□□□□□ -1.8
CSR2YPR030W TCD1P38756 429 aa3.83□□□□□ -1.8
CSR2YPR030W HYR1P40581 163 aaKnown RBP3.83□□□□□ -1.8
CSR2YPR030W NOP14Q99207 810 aaKnown RBP3.83□□□□□ -1.8
CSR2YPR030W URB1P34241 1764 aaKnown RBP3.83□□□□□ -1.8
CSR2YPR030W YEF3P16521 1044 aaKnown RBP3.83□□□□□ -1.8
CSR2YPR030W FKH1P40466 484 aa3.83□□□□□ -1.8
CSR2YPR030W RRT14P40470 206 aa3.83□□□□□ -1.8
CSR2YPR030W SPC110P32380 944 aa3.82□□□□□ -1.8
CSR2YPR030W YIL092WP40497 633 aa3.82□□□□□ -1.8
CSR2YPR030W DJP1P40564 432 aa3.82□□□□□ -1.8
CSR2YPR030W NUP145P49687 1317 aa3.82□□□□□ -1.8
CSR2YPR030W BYE1P36106 594 aa3.82□□□□□ -1.8
CSR2YPR030W BDH2P39713 417 aa3.82□□□□□ -1.8
CSR2YPR030W FUN12P39730 1002 aaKnown RBP3.82□□□□□ -1.8
CSR2YPR030W LCD1Q04377 747 aa3.82□□□□□ -1.8
CSR2YPR030W BNR1P40450 1375 aa3.81□□□□□ -1.8
CSR2YPR030W RAD2P07276 1031 aa3.8□□□□□ -1.8
CSR2YPR030W RKM3P38222 552 aa3.8□□□□□ -1.8
CSR2YPR030W KRI1P42846 591 aaKnown RBP3.8□□□□□ -1.8
CSR2YPR030W STU2P46675 888 aa3.8□□□□□ -1.8
CSR2YPR030W ECM16Q04217 1267 aaKnown RBP3.8□□□□□ -1.8
CSR2YPR030W POL32P47110 350 aa3.8□□□□□ -1.8
CSR2YPR030W YOL087CQ99247 1116 aa3.8□□□□□ -1.8
CSR2YPR030W SPT21P35209 758 aa3.8□□□□□ -1.8
CSR2YPR030W YPP1P46951 817 aa3.8□□□□□ -1.8
CSR2YPR030W HEF3P53978 1044 aaKnown RBP3.8□□□□□ -1.8
CSR2YPR030W LYS2P07702 1392 aa3.79□□□□□ -1.8
CSR2YPR030W SRP54P20424 541 aaKnown RBP3.79□□□□□ -1.8
CSR2YPR030W ITC1P53125 1264 aa3.79□□□□□ -1.8
CSR2YPR030W TRK1P12685 1235 aa3.79□□□□□ -1.8
CSR2YPR030W PBY1P38254 753 aa3.79□□□□□ -1.8
CSR2YPR030W CIR1P42940 261 aa3.79□□□□□ -1.8
CSR2YPR030W SAP155P43612 1002 aa3.79□□□□□ -1.8
CSR2YPR030W SNU71P53207 620 aaKnown RBP3.79□□□□□ -1.8
CSR2YPR030W RRP46P53256 223 aaPredicted RBP3.79□□□□□ -1.8
CSR2YPR030W HOS3Q02959 697 aaKnown RBP3.78□□□□□ -1.8
CSR2YPR030W PLP2Q12017 286 aa3.78□□□□□ -1.8
CSR2YPR030W UTP10P42945 1769 aaKnown RBP3.78□□□□□ -1.8
CSR2YPR030W TPM2P40414 161 aa3.78□□□□□ -1.8
CSR2YPR030W CEP3P40969 608 aa3.78□□□□□ -1.8
CSR2YPR030W VPS4P52917 437 aa3.78□□□□□ -1.8
CSR2YPR030W HST1P53685 503 aa3.78□□□□□ -1.8
CSR2YPR030W VPS60Q03390 229 aa3.78□□□□□ -1.8
CSR2YPR030W PSK1P31374 1356 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms