RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W NUD1P32336 851 aa7.19□□□□□ -1.26
RET3YPL010W STR2P47164 639 aa7.19□□□□□ -1.26
RET3YPL010W PEP1P32319 1579 aa7.19□□□□□ -1.26
RET3YPL010W PSE1P32337 1089 aaKnown RBP7.18□□□□□ -1.26
RET3YPL010W ISM1P48526 1002 aa7.18□□□□□ -1.26
RET3YPL010W SDH2P21801 266 aa7.17□□□□□ -1.26
RET3YPL010W AMS1P22855 1083 aa7.17□□□□□ -1.26
RET3YPL010W BPT1P14772 1559 aa7.16□□□□□ -1.26
RET3YPL010W MRF1P30775 413 aaPredicted RBP7.16□□□□□ -1.26
RET3YPL010W YPR109WQ06104 294 aa7.16□□□□□ -1.26
RET3YPL010W MAM3Q12296 706 aa7.16□□□□□ -1.26
RET3YPL010W NPL4P33755 580 aa7.14□□□□□ -1.27
RET3YPL010W SKI3P17883 1432 aaKnown RBP7.12□□□□□ -1.27
RET3YPL010W CLB5P30283 435 aa7.12□□□□□ -1.27
RET3YPL010W YEL077CQ3E7X8 1277 aa7.12□□□□□ -1.27
RET3YPL010W TRK1P12685 1235 aa7.11□□□□□ -1.27
RET3YPL010W TY1A-DR4O74302 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-HP0C2I4 478 aaKnown RBP7.1□□□□□ -1.27
RET3YPL010W TY1A-AP0CX57 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-PR1P0CX58 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-ORP0CX59 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-PR2P0CX60 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-DR5P0CX65 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-ER2P0CX66 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-GR3P0CX67 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-LR1P0CX68 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-MR2P0CX69 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-JR2P47099 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-DR1Q03856 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-ML1Q04706 440 aaKnown RBP7.1□□□□□ -1.27
RET3YPL010W TY1A-BRQ12217 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-NL2Q12470 440 aa7.1□□□□□ -1.27
RET3YPL010W TY1A-GR2Q12485 440 aa7.1□□□□□ -1.27
RET3YPL010W ATG2P53855 1592 aa7.09□□□□□ -1.27
RET3YPL010W SEC2P17065 759 aa7.09□□□□□ -1.27
RET3YPL010W NUP42P49686 430 aaKnown RBP7.09□□□□□ -1.27
RET3YPL010W TAF2P23255 1407 aa7.09□□□□□ -1.28
RET3YPL010W GCD11P32481 527 aaKnown RBP7.08□□□□□ -1.28
RET3YPL010W IES2P40154 320 aa7.08□□□□□ -1.28
RET3YPL010W ERG12P07277 443 aa7.05□□□□□ -1.28
RET3YPL010W SPB4P25808 606 aaPredicted RBP7.05□□□□□ -1.28
RET3YPL010W SSN2P38931 1420 aa7.03□□□□□ -1.28
RET3YPL010W YCF1P39109 1515 aaKnown RBP7.03□□□□□ -1.28
RET3YPL010W SPT16P32558 1035 aaKnown RBP7.03□□□□□ -1.28
RET3YPL010W RTF1P53064 558 aa7.03□□□□□ -1.28
RET3YPL010W SIT4P20604 311 aa7.01□□□□□ -1.29
RET3YPL010W PAT1P25644 796 aaKnown RBP7.01□□□□□ -1.29
RET3YPL010W DIT2P21595 489 aa7□□□□□ -1.29
RET3YPL010W RQC2Q12532 1038 aaKnown RBP7□□□□□ -1.29
RET3YPL010W KEX2P13134 814 aa6.99□□□□□ -1.29
RET3YPL010W TEA1P47988 759 aa6.99□□□□□ -1.29
RET3YPL010W ERF2Q06551 359 aa6.99□□□□□ -1.29
RET3YPL010W LAM6Q08001 693 aa6.99□□□□□ -1.29
RET3YPL010W CST6P40535 587 aa6.98□□□□□ -1.29
RET3YPL010W RRN7P40992 514 aa6.98□□□□□ -1.29
RET3YPL010W YNL115CP53925 644 aa6.97□□□□□ -1.29
RET3YPL010W UFD4P33202 1483 aa6.97□□□□□ -1.29
RET3YPL010W AGE1Q04412 482 aa6.96□□□□□ -1.3
RET3YPL010W SIN3P22579 1536 aa6.96□□□□□ -1.3
RET3YPL010W SSK2P53599 1579 aa6.95□□□□□ -1.3
RET3YPL010W MOD5P07884 428 aa6.94□□□□□ -1.3
RET3YPL010W MET5P47169 1442 aa6.93□□□□□ -1.3
RET3YPL010W NIS1P53939 407 aa6.93□□□□□ -1.3
RET3YPL010W BDP1P46678 594 aa6.92□□□□□ -1.3
RET3YPL010W TUB4P53378 473 aa6.92□□□□□ -1.3
RET3YPL010W PAC1P39946 494 aaKnown RBP6.91□□□□□ -1.3
RET3YPL010W AIR1P40507 360 aaKnown RBP6.91□□□□□ -1.3
RET3YPL010W CLA4P48562 842 aa6.91□□□□□ -1.3
RET3YPL010W YNR021WP53723 404 aaKnown RBP6.9□□□□□ -1.3
RET3YPL010W HED1Q03937 162 aa6.9□□□□□ -1.3
RET3YPL010W LTE1P07866 1435 aa6.9□□□□□ -1.31
RET3YPL010W CDC4P07834 779 aa6.89□□□□□ -1.31
RET3YPL010W FPK1P53739 893 aa6.89□□□□□ -1.31
RET3YPL010W FRK1Q03002 865 aaPredicted RBP6.89□□□□□ -1.31
RET3YPL010W CHD1P32657 1468 aa6.88□□□□□ -1.31
RET3YPL010W TPD3P31383 635 aa6.88□□□□□ -1.31
RET3YPL010W YPL062WQ02781 134 aa6.88□□□□□ -1.31
RET3YPL010W HST2P53686 357 aa6.86□□□□□ -1.31
RET3YPL010W YPK9Q12697 1472 aa6.85□□□□□ -1.31
RET3YPL010W BRE2P43132 505 aa6.85□□□□□ -1.31
RET3YPL010W SCC2Q04002 1493 aa6.85□□□□□ -1.31
RET3YPL010W KXD1P53158 218 aa6.84□□□□□ -1.31
RET3YPL010W ATF2P53296 535 aa6.84□□□□□ -1.31
RET3YPL010W YMR196WQ04336 1088 aa6.84□□□□□ -1.31
RET3YPL010W ITT1Q04638 464 aa6.84□□□□□ -1.31
RET3YPL010W GCR2Q01722 534 aa6.83□□□□□ -1.32
RET3YPL010W RPO31P04051 1460 aa6.83□□□□□ -1.32
RET3YPL010W ESP1Q03018 1630 aa6.83□□□□□ -1.32
RET3YPL010W SLY41P22215 453 aa6.82□□□□□ -1.32
RET3YPL010W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
RET3YPL010W AIM7Q12156 149 aa6.82□□□□□ -1.32
RET3YPL010W HXT10P43581 546 aa6.81□□□□□ -1.32
RET3YPL010W PUS6P53294 404 aa6.81□□□□□ -1.32
RET3YPL010W PAN1P32521 1480 aa6.8□□□□□ -1.32
RET3YPL010W MYO2P19524 1574 aaKnown RBP6.8□□□□□ -1.32
RET3YPL010W GAR1P28007 205 aaKnown RBP6.8□□□□□ -1.32
RET3YPL010W CDC25P04821 1589 aa6.79□□□□□ -1.32
RET3YPL010W RRD1P40454 393 aaKnown RBP6.79□□□□□ -1.32
RET3YPL010W RPA14P50106 137 aa6.79□□□□□ -1.32
RET3YPL010W YPR097WQ06839 1073 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms