RNA–Protein interactions for RNA: YOR033C

EXO1, Transcript of 5'-3' exonuclease and flap-endonuclease, yeast

Gene EXO1, Length 2,109 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO1	YOR033C	ISW1	P38144	1129 aa		6.04	□□□□□ -1.44
EXO1	YOR033C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.04	□□□□□ -1.44	not detected
EXO1	YOR033C	TAF13	P11747	167 aa		6.03	□□□□□ -1.44
EXO1	YOR033C	CLB1	P24868	471 aa		6.03	□□□□□ -1.44
EXO1	YOR033C	SWI3	P32591	825 aa		6.03	□□□□□ -1.44
EXO1	YOR033C	XRN1	P22147	1528 aa	Known RBP	6.03	□□□□□ -1.44
EXO1	YOR033C	BDP1	P46678	594 aa		6.02	□□□□□ -1.45
EXO1	YOR033C	TPO2	P53283	614 aa		6.02	□□□□□ -1.45
EXO1	YOR033C	DAL5	P15365	543 aa		6.02	□□□□□ -1.45
EXO1	YOR033C	YGL015C	P33199	130 aa		6.02	□□□□□ -1.45
EXO1	YOR033C	YMR196W	Q04336	1088 aa		6.02	□□□□□ -1.45
EXO1	YOR033C	CHD1	P32657	1468 aa		6.02	□□□□□ -1.45
EXO1	YOR033C	RCF1	Q03713	159 aa		6.01	□□□□□ -1.45
EXO1	YOR033C	CFT2	Q12102	859 aa	Predicted RBP	6.01	□□□□□ -1.45
EXO1	YOR033C	TY4B-P	A0A0B7P3V8	1104 aa		6.01	□□□□□ -1.45
EXO1	YOR033C	CHZ1	P40019	153 aa	Predicted RBP	6.01	□□□□□ -1.45
EXO1	YOR033C	ITC1	P53125	1264 aa		6.01	□□□□□ -1.45
EXO1	YOR033C	RSC1	P53236	928 aa		6.01	□□□□□ -1.45
EXO1	YOR033C	IMH1	Q06704	911 aa	Known RBP	6.01	□□□□□ -1.45
EXO1	YOR033C	MDM38	Q08179	573 aa		6.01	□□□□□ -1.45
EXO1	YOR033C	NFI1	Q12216	726 aa		6.01	□□□□□ -1.45
EXO1	YOR033C	ASF1	P32447	279 aa		6	□□□□□ -1.45
EXO1	YOR033C	MYO4	P32492	1471 aa		6	□□□□□ -1.45
EXO1	YOR033C	RAM2	P29703	316 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	PUP2	P32379	260 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	PIM1	P36775	1133 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	TPM2	P40414	161 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	VPS30	Q02948	557 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	GGA1	Q06336	557 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	BUD4	P47136	1447 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	MON2	P48563	1636 aa	Predicted RBP	5.99	□□□□□ -1.45
EXO1	YOR033C	RCR1	P38212	213 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	ATG36	P46983	293 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	RNT1	Q02555	471 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	YOR389W	Q08912	624 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	VPS5	Q92331	675 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	EDE1	P34216	1381 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	SRB8	P25648	1427 aa		5.99	□□□□□ -1.45
EXO1	YOR033C	ZUO1	P32527	433 aa	Known RBP	5.98	□□□□□ -1.45
EXO1	YOR033C	DSF2	P38213	736 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	YIR014W	P40570	242 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	RAD2	P07276	1031 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	KAR3	P17119	729 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	PHO87	P25360	923 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	SEC20	P28791	383 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	MTR4	P47047	1073 aa	Known RBP	5.98	□□□□□ -1.45
EXO1	YOR033C	VPS60	Q03390	229 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	COG8	Q04632	607 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	NDL1	Q06568	189 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	GLE1	Q12315	538 aa		5.98	□□□□□ -1.45
EXO1	YOR033C	SWH1	P35845	1188 aa		5.97	□□□□□ -1.45
EXO1	YOR033C	PEP1	P32319	1579 aa		5.96	□□□□□ -1.45
EXO1	YOR033C	NOP14	Q99207	810 aa	Known RBP	5.96	□□□□□ -1.45
EXO1	YOR033C	SPB4	P25808	606 aa	Predicted RBP	5.96	□□□□□ -1.46
EXO1	YOR033C	PSO2	P30620	661 aa		5.96	□□□□□ -1.46
EXO1	YOR033C	CIN4	P39110	191 aa		5.96	□□□□□ -1.46
EXO1	YOR033C	SPT5	P27692	1063 aa	Known RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	SLX5	P32828	619 aa	Known RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	ARL1	P38116	183 aa	Known RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	PXR1	P53335	271 aa	Predicted RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	CEF1	Q03654	590 aa	Predicted RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	PUS1	Q12211	544 aa	Known RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	LSP1	Q12230	341 aa	Known RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	IKI3	Q06706	1349 aa	Known RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	KNS1	P32350	737 aa	Predicted RBP	5.95	□□□□□ -1.46
EXO1	YOR033C	RTG3	P38165	486 aa		5.95	□□□□□ -1.46
EXO1	YOR033C	TCD1	P38756	429 aa		5.95	□□□□□ -1.46
EXO1	YOR033C	PCT1	P13259	424 aa		5.94	□□□□□ -1.46
EXO1	YOR033C	MSP1	P28737	362 aa		5.94	□□□□□ -1.46
EXO1	YOR033C	TPS3	P38426	1054 aa	Known RBP	5.94	□□□□□ -1.46
EXO1	YOR033C	LAM1	P38851	1228 aa		5.94	□□□□□ -1.46
EXO1	YOR033C	ARR1	Q06596	294 aa		5.94	□□□□□ -1.46
EXO1	YOR033C	RAD3	P06839	778 aa		5.93	□□□□□ -1.46
EXO1	YOR033C	CLN1	P20437	546 aa		5.93	□□□□□ -1.46
EXO1	YOR033C	PSE1	P32337	1089 aa	Known RBP	5.93	□□□□□ -1.46
EXO1	YOR033C	GCD6	P32501	712 aa	Known RBP	5.93	□□□□□ -1.46
EXO1	YOR033C	NPR3	P38742	1146 aa		5.93	□□□□□ -1.46
EXO1	YOR033C	OSW7	P43611	510 aa		5.93	□□□□□ -1.46
EXO1	YOR033C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.93	□□□□□ -1.46	not detected
EXO1	YOR033C	PKH1	Q03407	766 aa		5.93	□□□□□ -1.46
EXO1	YOR033C	YDR341C	Q05506	607 aa	Known RBP	5.93	□□□□□ -1.46
EXO1	YOR033C	ORM2	Q06144	216 aa		5.93	□□□□□ -1.46
EXO1	YOR033C	TRM732	Q03496	1420 aa		5.93	□□□□□ -1.46
EXO1	YOR033C	VPS24	P36095	224 aa	Known RBP	5.93	□□□□□ -1.46
EXO1	YOR033C	TFG1	P41895	735 aa	Predicted RBP	5.93	□□□□□ -1.46
EXO1	YOR033C	PSR1	Q07800	427 aa		5.93	□□□□□ -1.46
EXO1	YOR033C	ABP1	P15891	592 aa	Known RBP	5.92	□□□□□ -1.46
EXO1	YOR033C	RTT106	P40161	455 aa		5.92	□□□□□ -1.46
EXO1	YOR033C	KIP3	P53086	805 aa	Known RBP	5.92	□□□□□ -1.46
EXO1	YOR033C	JJJ1	P53863	590 aa		5.92	□□□□□ -1.46
EXO1	YOR033C	RRB1	Q04225	511 aa	Known RBP	5.92	□□□□□ -1.46
EXO1	YOR033C	UTP13	Q05946	817 aa	Known RBP	5.92	□□□□□ -1.46
EXO1	YOR033C	CLF1	Q12309	687 aa	Predicted RBP	5.92	□□□□□ -1.46
EXO1	YOR033C	SEC39	Q12745	709 aa		5.92	□□□□□ -1.46
EXO1	YOR033C	RPL5	P26321	297 aa	Known RBP	5.92	□□□□□ -1.46
EXO1	YOR033C	ESC2	Q06340	456 aa		5.92	□□□□□ -1.46
EXO1	YOR033C	YLR419W	Q06698	1435 aa	Known RBP	5.92	□□□□□ -1.46
EXO1	YOR033C	SLP1	Q12232	587 aa		5.92	□□□□□ -1.46
EXO1	YOR033C	NDC80	P40460	691 aa		5.91	□□□□□ -1.46
EXO1	YOR033C	SEC27	P41811	889 aa	Known RBP	5.91	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms