RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	SRS2	P12954	1174 aa		4.72	□□□□□ -1.65
ATG2	YNL242W	RTF1	P53064	558 aa		4.72	□□□□□ -1.65
ATG2	YNL242W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
ATG2	YNL242W	SMC3	P47037	1230 aa		4.72	□□□□□ -1.65
ATG2	YNL242W	PRP40	P33203	583 aa	Known RBP	4.72	□□□□□ -1.65
ATG2	YNL242W	RIA1	P53893	1110 aa		4.71	□□□□□ -1.65
ATG2	YNL242W	EDE1	P34216	1381 aa		4.71	□□□□□ -1.66
ATG2	YNL242W	CLB1	P24868	471 aa		4.71	□□□□□ -1.66
ATG2	YNL242W	MCM2	P29469	868 aa		4.71	□□□□□ -1.66
ATG2	YNL242W	TY3B-G	Q99315	1547 aa		4.71	□□□□□ -1.66
ATG2	YNL242W	NMD2	P38798	1089 aa	Known RBP	4.7	□□□□□ -1.66
ATG2	YNL242W	SFI1	Q12369	946 aa		4.7	□□□□□ -1.66
ATG2	YNL242W	LAM6	Q08001	693 aa		4.7	□□□□□ -1.66
ATG2	YNL242W	YIL092W	P40497	633 aa		4.69	□□□□□ -1.66
ATG2	YNL242W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
ATG2	YNL242W	TAF8	Q03750	510 aa		4.69	□□□□□ -1.66
ATG2	YNL242W	RFC1	P38630	861 aa	Known RBP	4.69	□□□□□ -1.66
ATG2	YNL242W	UTP13	Q05946	817 aa	Known RBP	4.69	□□□□□ -1.66
ATG2	YNL242W	ULS1	Q08562	1619 aa		4.69	□□□□□ -1.66
ATG2	YNL242W	KAR2	P16474	682 aa	Known RBP	4.69	□□□□□ -1.66
ATG2	YNL242W	DEP1	P31385	405 aa		4.69	□□□□□ -1.66
ATG2	YNL242W	SPC110	P32380	944 aa		4.69	□□□□□ -1.66
ATG2	YNL242W	RLP24	Q07915	199 aa	Known RBP	4.69	□□□□□ -1.66
ATG2	YNL242W	LSP1	Q12230	341 aa	Known RBP	4.69	□□□□□ -1.66
ATG2	YNL242W	GDB1	Q06625	1536 aa		4.69	□□□□□ -1.66
ATG2	YNL242W	MAK21	Q12176	1025 aa	Known RBP	4.69	□□□□□ -1.66
ATG2	YNL242W	MSH4	P40965	878 aa	Predicted RBP	4.68	□□□□□ -1.66
ATG2	YNL242W	HOS3	Q02959	697 aa	Known RBP	4.68	□□□□□ -1.66
ATG2	YNL242W	RPN7	Q06103	429 aa	Known RBP	4.68	□□□□□ -1.66
ATG2	YNL242W	MSH3	P25336	1018 aa		4.68	□□□□□ -1.66
ATG2	YNL242W	CAT8	P39113	1433 aa		4.68	□□□□□ -1.66
ATG2	YNL242W	DID4	P36108	232 aa		4.68	□□□□□ -1.66
ATG2	YNL242W	YMR196W	Q04336	1088 aa		4.68	□□□□□ -1.66
ATG2	YNL242W	PRP3	Q03338	469 aa	Predicted RBP	4.67	□□□□□ -1.66
ATG2	YNL242W	YEF3	P16521	1044 aa	Known RBP	4.67	□□□□□ -1.66
ATG2	YNL242W	LTV1	P34078	463 aa		4.67	□□□□□ -1.66
ATG2	YNL242W	YAP3	P38749	330 aa		4.67	□□□□□ -1.66
ATG2	YNL242W	CYC8	P14922	966 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	GDT1	P38301	280 aa	Predicted RBP	4.66	□□□□□ -1.66
ATG2	YNL242W	TCD1	P38756	429 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	VTH1	P40438	1549 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	VTH2	P40890	1549 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	VPS20	Q04272	221 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	APC11	Q12157	165 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	SES1	P07284	462 aa	Known RBP	4.66	□□□□□ -1.66
ATG2	YNL242W	RKM3	P38222	552 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	YBR287W	P38355	427 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	HPC2	Q01448	625 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	NUP157	P40064	1391 aa	Known RBP	4.66	□□□□□ -1.66
ATG2	YNL242W	SUP35	P05453	685 aa	Known RBP	4.66	□□□□□ -1.66
ATG2	YNL242W	DLD1	P32891	587 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	RVS167	P39743	482 aa	Known RBP	4.66	□□□□□ -1.66
ATG2	YNL242W	RSM25	P40496	264 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	TIM50	Q02776	476 aa		4.66	□□□□□ -1.66
ATG2	YNL242W	ARO1	P08566	1588 aa	Known RBP	4.66	□□□□□ -1.66
ATG2	YNL242W	BIK1	P11709	440 aa		4.65	□□□□□ -1.66
ATG2	YNL242W	MNR2	P35724	969 aa		4.65	□□□□□ -1.66
ATG2	YNL242W	VPS60	Q03390	229 aa		4.65	□□□□□ -1.66
ATG2	YNL242W	TRP5	P00931	707 aa	Known RBP	4.65	□□□□□ -1.66
ATG2	YNL242W	SVF1	Q05515	481 aa		4.65	□□□□□ -1.66
ATG2	YNL242W	NNF2	P53253	936 aa		4.65	□□□□□ -1.67
ATG2	YNL242W	PKH1	Q03407	766 aa		4.65	□□□□□ -1.67
ATG2	YNL242W	GRX3	Q03835	250 aa		4.65	□□□□□ -1.67
ATG2	YNL242W	RTC1	Q08281	1341 aa		4.65	□□□□□ -1.67
ATG2	YNL242W	NKP2	Q06162	153 aa		4.65	□□□□□ -1.67
ATG2	YNL242W	THI22	Q06490	572 aa		4.65	□□□□□ -1.67
ATG2	YNL242W	RPN12	P32496	274 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	OSW7	P43611	510 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	TRM3	Q07527	1436 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	PDR5	P33302	1511 aa	Known RBP	4.64	□□□□□ -1.67
ATG2	YNL242W	PRD1	P25375	712 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	NPA3	P47122	385 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	RTT109	Q07794	436 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	SNT2	P53127	1403 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	FKH1	P40466	484 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	NUP145	P49687	1317 aa		4.64	□□□□□ -1.67
ATG2	YNL242W	SLD2	P34252	453 aa		4.63	□□□□□ -1.67
ATG2	YNL242W	ENT3	P47160	408 aa		4.63	□□□□□ -1.67
ATG2	YNL242W	PRP31	P49704	494 aa	Predicted RBP	4.63	□□□□□ -1.67
ATG2	YNL242W	RRP46	P53256	223 aa	Predicted RBP	4.63	□□□□□ -1.67
ATG2	YNL242W	ARP5	P53946	755 aa		4.63	□□□□□ -1.67
ATG2	YNL242W	VMS1	Q04311	632 aa	Known RBP	4.63	□□□□□ -1.67
ATG2	YNL242W	LTE1	P07866	1435 aa		4.63	□□□□□ -1.67
ATG2	YNL242W	BRN1	P38170	754 aa		4.63	□□□□□ -1.67
ATG2	YNL242W	RPN1	P38764	993 aa	Known RBP	4.63	□□□□□ -1.67
ATG2	YNL242W	BUD3	P25558	1636 aa		4.63	□□□□□ -1.67
ATG2	YNL242W	RAD50	P12753	1312 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	RIM101	P33400	625 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	ETT1	Q08421	412 aa	Known RBP	4.62	□□□□□ -1.67
ATG2	YNL242W	IRC20	Q06554	1556 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	SPO1	P53541	631 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	YNL011C	P53980	444 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	GCN2	P15442	1659 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	VAS1	P07806	1104 aa	Known RBP	4.62	□□□□□ -1.67
ATG2	YNL242W	UGA2	P38067	497 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	YNG2	P38806	282 aa	Known RBP	4.62	□□□□□ -1.67
ATG2	YNL242W	HXT13	P39924	564 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	ENP2	P48234	707 aa	Known RBP	4.62	□□□□□ -1.67
ATG2	YNL242W	HAP5	Q02516	242 aa		4.62	□□□□□ -1.67
ATG2	YNL242W	RNT1	Q02555	471 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms