RNA–Protein interactions for RNA: YNL212W

VID27, Transcript of Cytoplasmic protein of unknown function, yeastyeast

Gene VID27, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID27YNL212W REB1P21538 810 aa5.51□□□□□ -1.53
VID27YNL212W SSA4P22202 642 aaKnown RBP5.51□□□□□ -1.53
VID27YNL212W RRP5Q05022 1729 aaKnown RBP5.5□□□□□ -1.53
VID27YNL212W DUS1P53759 423 aaKnown RBP5.5□□□□□ -1.53
VID27YNL212W SSA2P10592 639 aaKnown RBP5.49□□□□□ -1.53
VID27YNL212W RSF2P46974 1380 aa5.49□□□□□ -1.53
VID27YNL212W SRB8P25648 1427 aa5.48□□□□□ -1.53
VID27YNL212W RPN1P38764 993 aaKnown RBP5.48□□□□□ -1.53
VID27YNL212W SNF2P22082 1703 aa5.47□□□□□ -1.53
VID27YNL212W CTH1P47976 325 aa5.43□□□□□ -1.54
VID27YNL212W ENT1Q12518 454 aa5.43□□□□□ -1.54
VID27YNL212W GEA1P47102 1408 aaPredicted RBP5.42□□□□□ -1.54
VID27YNL212W URB1P34241 1764 aaKnown RBP5.41□□□□□ -1.54
VID27YNL212W SSP1P38871 571 aa5.41□□□□□ -1.54
VID27YNL212W ORC1P54784 914 aaPredicted RBP5.4□□□□□ -1.54
VID27YNL212W SRF1Q12516 437 aa5.37□□□□□ -1.55
VID27YNL212W RPG1P38249 964 aaKnown RBP5.36□□□□□ -1.55
VID27YNL212W SPT7P35177 1332 aa5.36□□□□□ -1.55
VID27YNL212W ETP1P38748 585 aaKnown RBP5.36□□□□□ -1.55
VID27YNL212W IPL1P38991 367 aa5.35□□□□□ -1.55
VID27YNL212W CFT1Q06632 1357 aaKnown RBP5.33□□□□□ -1.56
VID27YNL212W FKS3Q04952 1785 aa5.33□□□□□ -1.56
VID27YNL212W CKB1P43639 278 aa5.32□□□□□ -1.56
VID27YNL212W ROM2P51862 1356 aaKnown RBP5.32□□□□□ -1.56
VID27YNL212W MAL31P38156 614 aa5.3□□□□□ -1.56
VID27YNL212W YVH1Q02256 364 aaKnown RBP5.29□□□□□ -1.56
VID27YNL212W YML020WQ03722 664 aa5.29□□□□□ -1.56
VID27YNL212W YPR117WQ06116 2489 aa5.28□□□□□ -1.56
VID27YNL212W RPN11P43588 306 aaKnown RBP5.28□□□□□ -1.56
VID27YNL212W RPS9BP05755 195 aaKnown RBP5.27□□□□□ -1.57
VID27YNL212W YJL181WP46987 611 aa5.26□□□□□ -1.57
VID27YNL212W RPL17AP05740 184 aaKnown RBP5.26□□□□□ -1.57
VID27YNL212W YEF3P16521 1044 aaKnown RBP5.26□□□□□ -1.57
VID27YNL212W RPL17BP46990 184 aaKnown RBP5.26□□□□□ -1.57
VID27YNL212W PIB1Q06651 286 aa5.26□□□□□ -1.57
VID27YNL212W EAR1Q03212 550 aa5.24□□□□□ -1.57
VID27YNL212W SPB4P25808 606 aaPredicted RBP5.23□□□□□ -1.57
VID27YNL212W PRP40P33203 583 aaKnown RBP5.23□□□□□ -1.57
VID27YNL212W RIM101P33400 625 aa5.23□□□□□ -1.57
VID27YNL212W NOP8Q08287 484 aaPredicted RBP5.23□□□□□ -1.57
VID27YNL212W APC1P53886 1748 aa5.22□□□□□ -1.57
VID27YNL212W NPR2P39923 615 aa5.22□□□□□ -1.57
VID27YNL212W YRB30P53107 440 aaPredicted RBP5.22□□□□□ -1.57
VID27YNL212W ALD3P54114 506 aa5.22□□□□□ -1.57
VID27YNL212W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
VID27YNL212W RAD9P14737 1309 aa5.21□□□□□ -1.57
VID27YNL212W BDF1P35817 686 aa5.21□□□□□ -1.58
VID27YNL212W YLL066CQ99208 1374 aa5.21□□□□□ -1.58
VID27YNL212W TOP1P04786 769 aa5.2□□□□□ -1.58
VID27YNL212W LYS4P49367 693 aaPredicted RBP5.2□□□□□ -1.58
VID27YNL212W NUP192P47054 1683 aa5.2□□□□□ -1.58
VID27YNL212W FPK1P53739 893 aa5.2□□□□□ -1.58
VID27YNL212W NUM1Q00402 2748 aa5.19□□□□□ -1.58
VID27YNL212W CTT1P06115 562 aa5.18□□□□□ -1.58
VID27YNL212W SLX8P40072 274 aa5.18□□□□□ -1.58
VID27YNL212W NCS6P53088 359 aa5.18□□□□□ -1.58
VID27YNL212W TIF6Q12522 245 aaKnown RBP5.18□□□□□ -1.58
VID27YNL212W MHP1P43638 1398 aa5.18□□□□□ -1.58
VID27YNL212W TOR1P35169 2470 aa5.18□□□□□ -1.58
VID27YNL212W YNR029CP53729 429 aaKnown RBP5.17□□□□□ -1.58
VID27YNL212W LAM6Q08001 693 aa5.17□□□□□ -1.58
VID27YNL212W SAP155P43612 1002 aa5.17□□□□□ -1.58
VID27YNL212W NOP7P53261 605 aaKnown RBP5.17□□□□□ -1.58
VID27YNL212W SNU71P53207 620 aaKnown RBP5.16□□□□□ -1.58
VID27YNL212W YER156CP40093 338 aaKnown RBP5.15□□□□□ -1.59
VID27YNL212W HGH1P48362 394 aaKnown RBP5.15□□□□□ -1.59
VID27YNL212W KIN1P13185 1064 aa5.14□□□□□ -1.59
VID27YNL212W ISW2Q08773 1120 aa5.14□□□□□ -1.59
VID27YNL212W PSK1P31374 1356 aa5.14□□□□□ -1.59
VID27YNL212W YRF1-3P0CX14 1859 aa5.13□□□□□ -1.59
VID27YNL212W YRF1-7P0CX15 1859 aa5.13□□□□□ -1.59
VID27YNL212W DOT5P40553 215 aa5.13□□□□□ -1.59
VID27YNL212W YRF1-6P53819 1859 aa5.13□□□□□ -1.59
VID27YNL212W YLR271WQ06152 274 aa5.13□□□□□ -1.59
VID27YNL212W OXP1P28273 1286 aa5.12□□□□□ -1.59
VID27YNL212W BRL1P38770 471 aa5.12□□□□□ -1.59
VID27YNL212W YMR084WA2P2R3 262 aa5.12□□□□□ -1.59
VID27YNL212W DLD1P32891 587 aa5.12□□□□□ -1.59
VID27YNL212W SPT21P35209 758 aa5.11□□□□□ -1.59
VID27YNL212W TYW1Q08960 810 aaKnown RBP5.11□□□□□ -1.59
VID27YNL212W GEF1P37020 779 aa5.11□□□□□ -1.59
VID27YNL212W MGA2P40578 1113 aa5.11□□□□□ -1.59
VID27YNL212W SQS1P53866 767 aaKnown RBP5.11□□□□□ -1.59
VID27YNL212W VPS70P47161 811 aa5.1□□□□□ -1.59
VID27YNL212W TY4B-HP0C2J7 1802 aa5.09□□□□□ -1.59
VID27YNL212W TY4B-JP47024 1803 aa5.09□□□□□ -1.59
VID27YNL212W FOX2Q02207 900 aaKnown RBP5.08□□□□□ -1.6
VID27YNL212W FRK1Q03002 865 aaPredicted RBP5.07□□□□□ -1.6
VID27YNL212W YKL222CP35995 705 aa5.07□□□□□ -1.6
VID27YNL212W YNR014WP53719 212 aa5.07□□□□□ -1.6
VID27YNL212W YLR278CQ05854 1341 aa5.07□□□□□ -1.6
VID27YNL212W TYS1P36421 394 aaKnown RBP5.06□□□□□ -1.6
VID27YNL212W EAF6P47128 113 aa5.06□□□□□ -1.6
VID27YNL212W MRX12P47084 519 aa5.06□□□□□ -1.6
VID27YNL212W YNR021WP53723 404 aaKnown RBP5.06□□□□□ -1.6
VID27YNL212W CUP1-1P0CX80 61 aa5.05□□□□□ -1.6
VID27YNL212W CUP1-2P0CX81 61 aa5.05□□□□□ -1.6
VID27YNL212W CLA4P48562 842 aa5.05□□□□□ -1.6
VID27YNL212W YPR148CQ06523 435 aa5.05□□□□□ -1.6
VID27YNL212W SUB2Q07478 446 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms