RNA–Protein interactions for RNA: YMR199W

CLN1, Transcript of G1 cyclin involved in regulation of the cell cycle, yeastyeast

Gene CLN1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN1YMR199W FPR4Q06205 392 aaPredicted RBP8.17□□□□□ -1.1
CLN1YMR199W NOP58Q12499 511 aaKnown RBP8.17□□□□□ -1.1
CLN1YMR199W TY1B-DR4Q07793 1604 aa8.16□□□□□ -1.1
CLN1YMR199W YDR344CQ05510 147 aa8.16□□□□□ -1.1
CLN1YMR199W MLP2P40457 1679 aa8.16□□□□□ -1.1
CLN1YMR199W SLN1P39928 1220 aaPredicted RBP8.14□□□□□ -1.11
CLN1YMR199W MHP1P43638 1398 aa8.14□□□□□ -1.11
CLN1YMR199W SWR1Q05471 1514 aa8.14□□□□□ -1.11
CLN1YMR199W MYO4P32492 1471 aa8.13□□□□□ -1.11
CLN1YMR199W YPK9Q12697 1472 aa8.13□□□□□ -1.11
CLN1YMR199W IRC20Q06554 1556 aa8.13□□□□□ -1.11
CLN1YMR199W BCK2P33306 851 aa8.13□□□□□ -1.11
CLN1YMR199W FUN12P39730 1002 aaKnown RBP8.13□□□□□ -1.11
CLN1YMR199W KRI1P42846 591 aaKnown RBP8.13□□□□□ -1.11
CLN1YMR199W NAP1P25293 417 aaKnown RBP8.12□□□□□ -1.11
CLN1YMR199W CTR9P89105 1077 aa8.12□□□□□ -1.11
CLN1YMR199W TSC11P40061 1430 aa8.11□□□□□ -1.11
CLN1YMR199W AI4P03878 556 aa8.11□□□□□ -1.11
CLN1YMR199W MPH3P0CE00 602 aa8.11□□□□□ -1.11
CLN1YMR199W MID1P41821 548 aa8.11□□□□□ -1.11
CLN1YMR199W YRB30P53107 440 aaPredicted RBP8.11□□□□□ -1.11
CLN1YMR199W ILV3P39522 585 aaKnown RBP8.1□□□□□ -1.11
CLN1YMR199W NOT3P06102 836 aaKnown RBP8.09□□□□□ -1.11
CLN1YMR199W EDE1P34216 1381 aa8.08□□□□□ -1.12
CLN1YMR199W SPC110P32380 944 aa8.07□□□□□ -1.12
CLN1YMR199W SMC3P47037 1230 aa8.07□□□□□ -1.12
CLN1YMR199W DJP1P40564 432 aa8.07□□□□□ -1.12
CLN1YMR199W YGR273CP53329 174 aa8.07□□□□□ -1.12
CLN1YMR199W DNA2P38859 1522 aa8.06□□□□□ -1.12
CLN1YMR199W YPP1P46951 817 aa8.06□□□□□ -1.12
CLN1YMR199W ARH1P48360 493 aa8.06□□□□□ -1.12
CLN1YMR199W ELP4Q02884 456 aaKnown RBP8.06□□□□□ -1.12
CLN1YMR199W PCT1P13259 424 aa8.05□□□□□ -1.12
CLN1YMR199W SNQ2P32568 1501 aaKnown RBP8.05□□□□□ -1.12
CLN1YMR199W GEA1P47102 1408 aaPredicted RBP8.05□□□□□ -1.12
CLN1YMR199W VPS24P36095 224 aaKnown RBP8.04□□□□□ -1.12
CLN1YMR199W NMD2P38798 1089 aaKnown RBP8.04□□□□□ -1.12
CLN1YMR199W IFH1P39520 1085 aa8.04□□□□□ -1.12
CLN1YMR199W RAD26P40352 1085 aa8.04□□□□□ -1.12
CLN1YMR199W YCF1P39109 1515 aaKnown RBP8.04□□□□□ -1.12
CLN1YMR199W NUP159P40477 1460 aa8.03□□□□□ -1.12
CLN1YMR199W YOR1P53049 1477 aa8.03□□□□□ -1.12
CLN1YMR199W SPT2P06843 333 aaPredicted RBP8.03□□□□□ -1.12
CLN1YMR199W CDC45Q08032 650 aa8.03□□□□□ -1.12
CLN1YMR199W ESP1Q03018 1630 aa8.02□□□□□ -1.13
CLN1YMR199W MSP1P28737 362 aa8.02□□□□□ -1.13
CLN1YMR199W VRP1P37370 817 aa8□□□□□ -1.13
CLN1YMR199W ARL1P38116 183 aaKnown RBP8□□□□□ -1.13
CLN1YMR199W RPP0P05317 312 aaKnown RBP8□□□□□ -1.13
CLN1YMR199W HSP82P02829 709 aaKnown RBP7.99□□□□□ -1.13
CLN1YMR199W VPS27P40343 622 aaKnown RBP7.99□□□□□ -1.13
CLN1YMR199W PEX29Q03370 554 aa7.99□□□□□ -1.13
CLN1YMR199W KOG1P38873 1557 aa7.98□□□□□ -1.13
CLN1YMR199W KNS1P32350 737 aaPredicted RBP7.97□□□□□ -1.13
CLN1YMR199W RVB2Q12464 471 aaKnown RBP7.97□□□□□ -1.13
CLN1YMR199W SET1P38827 1080 aaKnown RBP7.96□□□□□ -1.13
CLN1YMR199W XDJ1P39102 459 aa7.96□□□□□ -1.14
CLN1YMR199W SPT23P35210 1082 aa7.95□□□□□ -1.14
CLN1YMR199W KIP3P53086 805 aaKnown RBP7.95□□□□□ -1.14
CLN1YMR199W MPC54Q08550 464 aa7.95□□□□□ -1.14
CLN1YMR199W PLP2Q12017 286 aa7.95□□□□□ -1.14
CLN1YMR199W SLI15P38283 698 aa7.94□□□□□ -1.14
CLN1YMR199W HAP5Q02516 242 aa7.94□□□□□ -1.14
CLN1YMR199W PDS5Q04264 1277 aa7.94□□□□□ -1.14
CLN1YMR199W LSP1Q12230 341 aaKnown RBP7.94□□□□□ -1.14
CLN1YMR199W RKR1Q04781 1562 aa7.94□□□□□ -1.14
CLN1YMR199W TRM3Q07527 1436 aa7.93□□□□□ -1.14
CLN1YMR199W RPN1P38764 993 aaKnown RBP7.93□□□□□ -1.14
CLN1YMR199W TPM2P40414 161 aa7.93□□□□□ -1.14
CLN1YMR199W MSH4P40965 878 aaPredicted RBP7.93□□□□□ -1.14
CLN1YMR199W NOP7P53261 605 aaKnown RBP7.93□□□□□ -1.14
CLN1YMR199W PSH1Q12161 406 aa7.92□□□□□ -1.14
CLN1YMR199W PDR15Q04182 1529 aaKnown RBP7.92□□□□□ -1.14
CLN1YMR199W GCN2P15442 1659 aa7.92□□□□□ -1.14
CLN1YMR199W DSN1P40568 576 aa7.92□□□□□ -1.14
CLN1YMR199W ORC1P54784 914 aaPredicted RBP7.92□□□□□ -1.14
CLN1YMR199W CLB5P30283 435 aa7.91□□□□□ -1.14
CLN1YMR199W VPS15P22219 1454 aa7.9□□□□□ -1.14
CLN1YMR199W KEX1P09620 729 aa7.9□□□□□ -1.14
CLN1YMR199W TCD1P38756 429 aa7.9□□□□□ -1.14
CLN1YMR199W CHZ1P40019 153 aaPredicted RBP7.9□□□□□ -1.14
CLN1YMR199W PIL1P53252 339 aaKnown RBP7.9□□□□□ -1.14
CLN1YMR199W BNI4P53858 892 aa7.9□□□□□ -1.14
CLN1YMR199W YNL011CP53980 444 aa7.9□□□□□ -1.14
CLN1YMR199W ESC2Q06340 456 aa7.9□□□□□ -1.14
CLN1YMR199W SWE1P32944 819 aa7.89□□□□□ -1.15
CLN1YMR199W TEA1P47988 759 aa7.89□□□□□ -1.15
CLN1YMR199W VPS4P52917 437 aa7.89□□□□□ -1.15
CLN1YMR199W PRP3Q03338 469 aaPredicted RBP7.89□□□□□ -1.15
CLN1YMR199W NUP157P40064 1391 aaKnown RBP7.88□□□□□ -1.15
CLN1YMR199W SIC1P38634 284 aa7.88□□□□□ -1.15
CLN1YMR199W RAD2P07276 1031 aa7.87□□□□□ -1.15
CLN1YMR199W MSH3P25336 1018 aa7.87□□□□□ -1.15
CLN1YMR199W CIN4P39110 191 aa7.87□□□□□ -1.15
CLN1YMR199W NMA111P53920 997 aa7.87□□□□□ -1.15
CLN1YMR199W VPS60Q03390 229 aa7.87□□□□□ -1.15
CLN1YMR199W DNF1P32660 1571 aa7.86□□□□□ -1.15
CLN1YMR199W LCD1Q04377 747 aa7.86□□□□□ -1.15
CLN1YMR199W DPL1Q05567 589 aa7.86□□□□□ -1.15
CLN1YMR199W BYE1P36106 594 aa7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms