RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C STR2P47164 639 aa5.67□□□□□ -1.5
VPS9YML097C HGH1P48362 394 aaKnown RBP5.67□□□□□ -1.5
VPS9YML097C ISM1P48526 1002 aa5.66□□□□□ -1.5
VPS9YML097C GCD11P32481 527 aaKnown RBP5.64□□□□□ -1.51
VPS9YML097C SPT16P32558 1035 aaKnown RBP5.64□□□□□ -1.51
VPS9YML097C NPL4P33755 580 aa5.63□□□□□ -1.51
VPS9YML097C NUP42P49686 430 aaKnown RBP5.63□□□□□ -1.51
VPS9YML097C ATF2P53296 535 aa5.63□□□□□ -1.51
VPS9YML097C TUM1Q08686 304 aaKnown RBP5.63□□□□□ -1.51
VPS9YML097C AIM7Q12156 149 aa5.63□□□□□ -1.51
VPS9YML097C NUD1P32336 851 aa5.62□□□□□ -1.51
VPS9YML097C MET22P32179 357 aa5.61□□□□□ -1.51
VPS9YML097C GUA1P38625 525 aaKnown RBP5.61□□□□□ -1.51
VPS9YML097C KIC1P38692 1080 aa5.61□□□□□ -1.51
VPS9YML097C LAM6Q08001 693 aa5.59□□□□□ -1.51
VPS9YML097C COX6P00427 148 aa5.57□□□□□ -1.52
VPS9YML097C MAK21Q12176 1025 aaKnown RBP5.57□□□□□ -1.52
VPS9YML097C RRN7P40992 514 aa5.56□□□□□ -1.52
VPS9YML097C BDP1P46678 594 aa5.56□□□□□ -1.52
VPS9YML097C CDC4P07834 779 aa5.55□□□□□ -1.52
VPS9YML097C YDR444WQ04093 687 aa5.55□□□□□ -1.52
VPS9YML097C TFB3Q03290 321 aa5.54□□□□□ -1.52
VPS9YML097C ENV9Q08651 330 aa5.54□□□□□ -1.52
VPS9YML097C TY1A-DR4O74302 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-HP0C2I4 478 aaKnown RBP5.53□□□□□ -1.52
VPS9YML097C TY1A-AP0CX57 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-PR1P0CX58 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-ORP0CX59 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-PR2P0CX60 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-DR5P0CX65 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-ER2P0CX66 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-GR3P0CX67 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-LR1P0CX68 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-MR2P0CX69 440 aa5.53□□□□□ -1.52
VPS9YML097C SEC2P17065 759 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-JR2P47099 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-DR1Q03856 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-ML1Q04706 440 aaKnown RBP5.53□□□□□ -1.52
VPS9YML097C TY1A-BRQ12217 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-NL2Q12470 440 aa5.53□□□□□ -1.52
VPS9YML097C TY1A-GR2Q12485 440 aa5.53□□□□□ -1.52
VPS9YML097C HPC2Q01448 625 aa5.51□□□□□ -1.53
VPS9YML097C YDR090CQ03193 310 aa5.51□□□□□ -1.53
VPS9YML097C CSC1Q06538 782 aa5.51□□□□□ -1.53
VPS9YML097C TFB4Q12004 338 aa5.51□□□□□ -1.53
VPS9YML097C BRL1P38770 471 aa5.5□□□□□ -1.53
VPS9YML097C PAT1P25644 796 aaKnown RBP5.49□□□□□ -1.53
VPS9YML097C PKC1P24583 1151 aa5.48□□□□□ -1.53
VPS9YML097C ASH1P34233 588 aa5.47□□□□□ -1.53
VPS9YML097C HED1Q03937 162 aa5.46□□□□□ -1.54
VPS9YML097C GAP1P19145 602 aaPredicted RBP5.45□□□□□ -1.54
VPS9YML097C YJL007CP47080 104 aa5.45□□□□□ -1.54
VPS9YML097C CSN12P47130 423 aa5.45□□□□□ -1.54
VPS9YML097C SSA2P10592 639 aaKnown RBP5.44□□□□□ -1.54
VPS9YML097C HST3P53687 447 aa5.44□□□□□ -1.54
VPS9YML097C BIM1P40013 344 aa5.42□□□□□ -1.54
VPS9YML097C LCB5Q06147 687 aaKnown RBP5.42□□□□□ -1.54
VPS9YML097C PUS5Q06244 254 aa5.42□□□□□ -1.54
VPS9YML097C YDL176WQ12027 708 aa5.42□□□□□ -1.54
VPS9YML097C PSE1P32337 1089 aaKnown RBP5.42□□□□□ -1.54
VPS9YML097C MET32Q12041 191 aa5.42□□□□□ -1.54
VPS9YML097C KEX2P13134 814 aa5.41□□□□□ -1.54
VPS9YML097C TYW1Q08960 810 aaKnown RBP5.41□□□□□ -1.54
VPS9YML097C ATG32P40458 529 aa5.4□□□□□ -1.55
VPS9YML097C RPL34BP40525 121 aaKnown RBP5.4□□□□□ -1.55
VPS9YML097C TEA1P47988 759 aa5.4□□□□□ -1.55
VPS9YML097C YML020WQ03722 664 aa5.4□□□□□ -1.55
VPS9YML097C YPR109WQ06104 294 aa5.4□□□□□ -1.55
VPS9YML097C ERF2Q06551 359 aa5.4□□□□□ -1.55
VPS9YML097C SSA1P10591 642 aaKnown RBP5.39□□□□□ -1.55
VPS9YML097C ORC6P38826 435 aa5.39□□□□□ -1.55
VPS9YML097C MVP1P40959 511 aaKnown RBP5.39□□□□□ -1.55
VPS9YML097C GLN1P32288 370 aaKnown RBP5.38□□□□□ -1.55
VPS9YML097C RRD1P40454 393 aaKnown RBP5.38□□□□□ -1.55
VPS9YML097C SUB2Q07478 446 aaKnown RBP5.38□□□□□ -1.55
VPS9YML097C GEF1P37020 779 aa5.37□□□□□ -1.55
VPS9YML097C KTR1P27810 393 aaKnown RBP5.36□□□□□ -1.55
VPS9YML097C YBL036CP38197 257 aa5.36□□□□□ -1.55
VPS9YML097C SLX8P40072 274 aa5.36□□□□□ -1.55
VPS9YML097C CAF120P53836 1060 aa5.36□□□□□ -1.55
VPS9YML097C AFT1P22149 690 aa5.35□□□□□ -1.55
VPS9YML097C PAC1P39946 494 aaKnown RBP5.35□□□□□ -1.55
VPS9YML097C YJR115WP47152 169 aa5.35□□□□□ -1.55
VPS9YML097C TIF1P10081 395 aaKnown RBP5.34□□□□□ -1.55
VPS9YML097C YMR196WQ04336 1088 aa5.34□□□□□ -1.55
VPS9YML097C YPR204WQ08995 1032 aa5.34□□□□□ -1.55
VPS9YML097C SSA4P22202 642 aaKnown RBP5.33□□□□□ -1.56
VPS9YML097C CPS1P27614 576 aa5.33□□□□□ -1.56
VPS9YML097C MTC5Q03897 1148 aa5.33□□□□□ -1.56
VPS9YML097C PKH3Q03306 898 aaPredicted RBP5.32□□□□□ -1.56
VPS9YML097C RGR1P19263 1082 aa5.31□□□□□ -1.56
VPS9YML097C BIO2P32451 375 aa5.3□□□□□ -1.56
VPS9YML097C RTG2P32608 588 aaKnown RBP5.3□□□□□ -1.56
VPS9YML097C YNL108CP53929 270 aa5.3□□□□□ -1.56
VPS9YML097C NIS1P53939 407 aa5.3□□□□□ -1.56
VPS9YML097C ESS1P22696 170 aa5.29□□□□□ -1.56
VPS9YML097C SCJ1P25303 377 aa5.29□□□□□ -1.56
VPS9YML097C CLB5P30283 435 aa5.29□□□□□ -1.56
VPS9YML097C FPK1P53739 893 aa5.29□□□□□ -1.56
VPS9YML097C MMP1Q12372 583 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms