RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C YPR109WQ06104 294 aa5.28□□□□□ -1.56
PRE8YML092C RGR1P19263 1082 aa5.27□□□□□ -1.57
PRE8YML092C NUD1P32336 851 aa5.27□□□□□ -1.57
PRE8YML092C RAM1P22007 431 aa5.26□□□□□ -1.57
PRE8YML092C PSE1P32337 1089 aaKnown RBP5.26□□□□□ -1.57
PRE8YML092C SKI3P17883 1432 aaKnown RBP5.25□□□□□ -1.57
PRE8YML092C TAF2P23255 1407 aa5.25□□□□□ -1.57
PRE8YML092C DIT2P21595 489 aa5.25□□□□□ -1.57
PRE8YML092C NUP42P49686 430 aaKnown RBP5.24□□□□□ -1.57
PRE8YML092C GCD11P32481 527 aaKnown RBP5.23□□□□□ -1.57
PRE8YML092C STR2P47164 639 aa5.23□□□□□ -1.57
PRE8YML092C ISM1P48526 1002 aa5.23□□□□□ -1.57
PRE8YML092C YCF1P39109 1515 aaKnown RBP5.23□□□□□ -1.57
PRE8YML092C DPS1P04802 557 aaKnown RBP5.22□□□□□ -1.57
PRE8YML092C BUD20Q08004 166 aaPredicted RBP5.22□□□□□ -1.57
PRE8YML092C PRT1P06103 763 aaKnown RBP5.21□□□□□ -1.58
PRE8YML092C TEA1P47988 759 aa5.21□□□□□ -1.58
PRE8YML092C CLB5P30283 435 aa5.2□□□□□ -1.58
PRE8YML092C ATF2P53296 535 aa5.2□□□□□ -1.58
PRE8YML092C SAS4Q04003 481 aa5.19□□□□□ -1.58
PRE8YML092C KEX2P13134 814 aa5.18□□□□□ -1.58
PRE8YML092C GLC3P32775 704 aa5.18□□□□□ -1.58
PRE8YML092C SSN2P38931 1420 aa5.17□□□□□ -1.58
PRE8YML092C UFD4P33202 1483 aa5.17□□□□□ -1.58
PRE8YML092C MRF1P30775 413 aaPredicted RBP5.16□□□□□ -1.58
PRE8YML092C SPT16P32558 1035 aaKnown RBP5.16□□□□□ -1.58
PRE8YML092C YMR196WQ04336 1088 aa5.16□□□□□ -1.58
PRE8YML092C RRN7P40992 514 aa5.15□□□□□ -1.59
PRE8YML092C YNR021WP53723 404 aaKnown RBP5.15□□□□□ -1.59
PRE8YML092C ERF2Q06551 359 aa5.15□□□□□ -1.59
PRE8YML092C ERG12P07277 443 aa5.14□□□□□ -1.59
PRE8YML092C PAT1P25644 796 aaKnown RBP5.14□□□□□ -1.59
PRE8YML092C NIS1P53939 407 aa5.14□□□□□ -1.59
PRE8YML092C YEL077CQ3E7X8 1277 aa5.14□□□□□ -1.59
PRE8YML092C SIN3P22579 1536 aa5.13□□□□□ -1.59
PRE8YML092C SSK2P53599 1579 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-DR4O74302 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-HP0C2I4 478 aaKnown RBP5.13□□□□□ -1.59
PRE8YML092C TY1A-AP0CX57 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-PR1P0CX58 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-ORP0CX59 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-PR2P0CX60 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-DR5P0CX65 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-ER2P0CX66 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-GR3P0CX67 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-LR1P0CX68 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-MR2P0CX69 440 aa5.13□□□□□ -1.59
PRE8YML092C SEC2P17065 759 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-JR2P47099 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-DR1Q03856 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-ML1Q04706 440 aaKnown RBP5.13□□□□□ -1.59
PRE8YML092C TY1A-BRQ12217 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-NL2Q12470 440 aa5.13□□□□□ -1.59
PRE8YML092C TY1A-GR2Q12485 440 aa5.13□□□□□ -1.59
PRE8YML092C RAS1P01119 309 aa5.12□□□□□ -1.59
PRE8YML092C MET5P47169 1442 aa5.12□□□□□ -1.59
PRE8YML092C AMS1P22855 1083 aa5.11□□□□□ -1.59
PRE8YML092C YNL115CP53925 644 aa5.11□□□□□ -1.59
PRE8YML092C DNF1P32660 1571 aa5.11□□□□□ -1.59
PRE8YML092C SLY41P22215 453 aa5.1□□□□□ -1.59
PRE8YML092C CHD1P32657 1468 aa5.1□□□□□ -1.59
PRE8YML092C FPK1P53739 893 aa5.1□□□□□ -1.59
PRE8YML092C ITT1Q04638 464 aa5.1□□□□□ -1.59
PRE8YML092C LEU3P08638 886 aa5.09□□□□□ -1.59
PRE8YML092C SDH2P21801 266 aa5.09□□□□□ -1.59
PRE8YML092C RTF1P53064 558 aa5.09□□□□□ -1.59
PRE8YML092C SCC2Q04002 1493 aa5.08□□□□□ -1.6
PRE8YML092C LTE1P07866 1435 aa5.08□□□□□ -1.6
PRE8YML092C TUB4P53378 473 aa5.08□□□□□ -1.6
PRE8YML092C FRK1Q03002 865 aaPredicted RBP5.08□□□□□ -1.6
PRE8YML092C SIT4P20604 311 aa5.07□□□□□ -1.6
PRE8YML092C SCJ1P25303 377 aa5.07□□□□□ -1.6
PRE8YML092C PAC1P39946 494 aaKnown RBP5.07□□□□□ -1.6
PRE8YML092C RPO31P04051 1460 aa5.07□□□□□ -1.6
PRE8YML092C YPK9Q12697 1472 aa5.07□□□□□ -1.6
PRE8YML092C TBF1Q02457 562 aa5.06□□□□□ -1.6
PRE8YML092C AIM7Q12156 149 aa5.06□□□□□ -1.6
PRE8YML092C MMP1Q12372 583 aa5.06□□□□□ -1.6
PRE8YML092C MYO2P19524 1574 aaKnown RBP5.06□□□□□ -1.6
PRE8YML092C CDC25P04821 1589 aa5.05□□□□□ -1.6
PRE8YML092C GLN1P32288 370 aaKnown RBP5.05□□□□□ -1.6
PRE8YML092C CST6P40535 587 aa5.05□□□□□ -1.6
PRE8YML092C SRC1Q03707 834 aa5.05□□□□□ -1.6
PRE8YML092C TYW1Q08960 810 aaKnown RBP5.05□□□□□ -1.6
PRE8YML092C ESP1Q03018 1630 aa5.05□□□□□ -1.6
PRE8YML092C ESS1P22696 170 aa5.04□□□□□ -1.6
PRE8YML092C BDP1P46678 594 aa5.04□□□□□ -1.6
PRE8YML092C HST2P53686 357 aa5.04□□□□□ -1.6
PRE8YML092C BNI1P41832 1953 aa5.04□□□□□ -1.6
PRE8YML092C KIN1P13185 1064 aa5.03□□□□□ -1.6
PRE8YML092C RPN1P38764 993 aaKnown RBP5.03□□□□□ -1.6
PRE8YML092C AGE1Q04412 482 aa5.03□□□□□ -1.6
PRE8YML092C PAN1P32521 1480 aa5.02□□□□□ -1.61
PRE8YML092C CSN12P47130 423 aa5.02□□□□□ -1.61
PRE8YML092C KXD1P53158 218 aa5.02□□□□□ -1.61
PRE8YML092C PKH3Q03306 898 aaPredicted RBP5.01□□□□□ -1.61
PRE8YML092C LAM6Q08001 693 aa5.01□□□□□ -1.61
PRE8YML092C TRK1P12685 1235 aa5□□□□□ -1.61
PRE8YML092C TRM1P15565 570 aaKnown RBP5□□□□□ -1.61
PRE8YML092C PUS6P53294 404 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms