RNA–Protein interactions for RNA: YLR129W

DIP2, Transcript of Nucleolar protein, yeast

Gene DIP2, Length 2,832 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DIP2	YLR129W	SSP1	P38871	571 aa		5.06	□□□□□ -1.6
DIP2	YLR129W	IME2	P32581	645 aa		5.05	□□□□□ -1.6
DIP2	YLR129W	SUB1	P54000	292 aa	Known RBP	5.05	□□□□□ -1.6
DIP2	YLR129W	PSH1	Q12161	406 aa		5.05	□□□□□ -1.6
DIP2	YLR129W	ENV11	P53246	860 aa		5.04	□□□□□ -1.6
DIP2	YLR129W	HIF1	Q12373	385 aa		5.04	□□□□□ -1.6
DIP2	YLR129W	SLX8	P40072	274 aa		5.04	□□□□□ -1.6
DIP2	YLR129W	SPT2	P06843	333 aa	Predicted RBP	5.03	□□□□□ -1.6
DIP2	YLR129W	PSD2	P53037	1138 aa	Known RBP	5.03	□□□□□ -1.6
DIP2	YLR129W	CFT1	Q06632	1357 aa	Known RBP	5.03	□□□□□ -1.6
DIP2	YLR129W	SSF1	P38789	453 aa	Predicted RBP	5.03	□□□□□ -1.6
DIP2	YLR129W	PDR15	Q04182	1529 aa	Known RBP	5.03	□□□□□ -1.6
DIP2	YLR129W	CHC1	P22137	1653 aa	Known RBP	5.03	□□□□□ -1.6
DIP2	YLR129W	CLC1	P17891	233 aa		5.02	□□□□□ -1.61
DIP2	YLR129W	OCA5	P38738	679 aa		5.02	□□□□□ -1.61
DIP2	YLR129W	VPS72	Q03388	795 aa		5.02	□□□□□ -1.61
DIP2	YLR129W	DNF3	Q12674	1656 aa		5.01	□□□□□ -1.61
DIP2	YLR129W	NUP157	P40064	1391 aa	Known RBP	5.01	□□□□□ -1.61
DIP2	YLR129W	ARO1	P08566	1588 aa	Known RBP	5	□□□□□ -1.61
DIP2	YLR129W	OPY1	P38271	328 aa		5	□□□□□ -1.61
DIP2	YLR129W	RIM101	P33400	625 aa		4.99	□□□□□ -1.61
DIP2	YLR129W	GEA1	P47102	1408 aa	Predicted RBP	4.99	□□□□□ -1.61
DIP2	YLR129W	SRB8	P25648	1427 aa		4.98	□□□□□ -1.61
DIP2	YLR129W	TOA1	P32773	286 aa		4.98	□□□□□ -1.61
DIP2	YLR129W	FUN12	P39730	1002 aa	Known RBP	4.98	□□□□□ -1.61
DIP2	YLR129W	PIL1	P53252	339 aa	Known RBP	4.98	□□□□□ -1.61
DIP2	YLR129W	BUD21	Q08492	214 aa	Predicted RBP	4.98	□□□□□ -1.61
DIP2	YLR129W	RPC31	P17890	251 aa		4.98	□□□□□ -1.61
DIP2	YLR129W	SPT16	P32558	1035 aa	Known RBP	4.98	□□□□□ -1.61
DIP2	YLR129W	OSW7	P43611	510 aa		4.98	□□□□□ -1.61
DIP2	YLR129W	YGR130C	P53278	816 aa		4.98	□□□□□ -1.61
DIP2	YLR129W	YJR008W	P47085	338 aa		4.97	□□□□□ -1.61
DIP2	YLR129W	TLG1	Q03322	224 aa		4.97	□□□□□ -1.61
DIP2	YLR129W	SUB2	Q07478	446 aa	Known RBP	4.97	□□□□□ -1.61
DIP2	YLR129W	GEF1	P37020	779 aa		4.96	□□□□□ -1.61
DIP2	YLR129W	PDR1	P12383	1068 aa		4.96	□□□□□ -1.62
DIP2	YLR129W	ASF1	P32447	279 aa		4.96	□□□□□ -1.62
DIP2	YLR129W	SEN54	Q02825	467 aa	Predicted RBP	4.96	□□□□□ -1.62
DIP2	YLR129W	YLR419W	Q06698	1435 aa	Known RBP	4.95	□□□□□ -1.62
DIP2	YLR129W	NHA1	Q99271	985 aa		4.95	□□□□□ -1.62
DIP2	YLR129W	BRN1	P38170	754 aa		4.94	□□□□□ -1.62
DIP2	YLR129W	NMD2	P38798	1089 aa	Known RBP	4.94	□□□□□ -1.62
DIP2	YLR129W	FPR4	Q06205	392 aa	Predicted RBP	4.94	□□□□□ -1.62
DIP2	YLR129W	TY3B-G	Q99315	1547 aa		4.94	□□□□□ -1.62
DIP2	YLR129W	MPP10	P47083	593 aa	Known RBP	4.94	□□□□□ -1.62
DIP2	YLR129W	PET111	P08468	800 aa		4.93	□□□□□ -1.62
DIP2	YLR129W	DAL5	P15365	543 aa		4.93	□□□□□ -1.62
DIP2	YLR129W	SPC110	P32380	944 aa		4.93	□□□□□ -1.62
DIP2	YLR129W	SPT21	P35209	758 aa		4.93	□□□□□ -1.62
DIP2	YLR129W	TIF4632	P39936	914 aa	Known RBP	4.93	□□□□□ -1.62
DIP2	YLR129W	RTS3	P53289	263 aa		4.93	□□□□□ -1.62
DIP2	YLR129W	SSA1	P10591	642 aa	Known RBP	4.93	□□□□□ -1.62
DIP2	YLR129W	RNA1	P11745	407 aa	Known RBP	4.93	□□□□□ -1.62
DIP2	YLR129W	OXP1	P28273	1286 aa		4.93	□□□□□ -1.62
DIP2	YLR129W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
DIP2	YLR129W	ZDS1	P50111	915 aa	Known RBP	4.93	□□□□□ -1.62
DIP2	YLR129W	VPS4	P52917	437 aa		4.92	□□□□□ -1.62
DIP2	YLR129W	EAF7	P53911	425 aa	Known RBP	4.92	□□□□□ -1.62
DIP2	YLR129W	KIN1	P13185	1064 aa		4.92	□□□□□ -1.62
DIP2	YLR129W	YNL011C	P53980	444 aa		4.92	□□□□□ -1.62
DIP2	YLR129W	SEC7	P11075	2009 aa	Known RBP	4.92	□□□□□ -1.62
DIP2	YLR129W	YLR271W	Q06152	274 aa		4.91	□□□□□ -1.62
DIP2	YLR129W	SSA2	P10592	639 aa	Known RBP	4.91	□□□□□ -1.62
DIP2	YLR129W	UBX5	Q06682	500 aa		4.91	□□□□□ -1.62
DIP2	YLR129W	CAT8	P39113	1433 aa		4.91	□□□□□ -1.62
DIP2	YLR129W	HSC82	P15108	705 aa	Known RBP	4.91	□□□□□ -1.62
DIP2	YLR129W	BRE1	Q07457	700 aa	Known RBP	4.91	□□□□□ -1.62
DIP2	YLR129W	MHP1	P43638	1398 aa		4.9	□□□□□ -1.62
DIP2	YLR129W	RRN6	P32786	894 aa		4.9	□□□□□ -1.62
DIP2	YLR129W	YAP3	P38749	330 aa		4.9	□□□□□ -1.63
DIP2	YLR129W	NST1	P53935	1240 aa		4.9	□□□□□ -1.63
DIP2	YLR129W	CDC11	P32458	415 aa		4.89	□□□□□ -1.63
DIP2	YLR129W	GUA1	P38625	525 aa	Known RBP	4.89	□□□□□ -1.63
DIP2	YLR129W	SNF7	P39929	240 aa	Known RBP	4.89	□□□□□ -1.63
DIP2	YLR129W	DSF2	P38213	736 aa		4.89	□□□□□ -1.63
DIP2	YLR129W	PMC1	P38929	1173 aa	Predicted RBP	4.88	□□□□□ -1.63
DIP2	YLR129W	NOP7	P53261	605 aa	Known RBP	4.88	□□□□□ -1.63
DIP2	YLR129W	GRX3	Q03835	250 aa		4.88	□□□□□ -1.63
DIP2	YLR129W	HAP1	P0CE41	1502 aa		4.88	□□□□□ -1.63
DIP2	YLR129W	BNR1	P40450	1375 aa		4.88	□□□□□ -1.63
DIP2	YLR129W	SVL3	Q03088	825 aa	Known RBP	4.88	□□□□□ -1.63
DIP2	YLR129W	PRI1	P10363	409 aa		4.87	□□□□□ -1.63
DIP2	YLR129W	YSH1	Q06224	779 aa	Predicted RBP	4.87	□□□□□ -1.63
DIP2	YLR129W	MAK10	Q02197	733 aa		4.87	□□□□□ -1.63
DIP2	YLR129W	TAF13	P11747	167 aa		4.87	□□□□□ -1.63
DIP2	YLR129W	ALD4	P46367	519 aa	Known RBP	4.87	□□□□□ -1.63
DIP2	YLR129W	PDS5	Q04264	1277 aa		4.87	□□□□□ -1.63
DIP2	YLR129W	YMR196W	Q04336	1088 aa		4.86	□□□□□ -1.63
DIP2	YLR129W	ROX1	P25042	368 aa		4.85	□□□□□ -1.63
DIP2	YLR129W	YBT1	P32386	1661 aa		4.85	□□□□□ -1.63
DIP2	YLR129W	YIR014W	P40570	242 aa		4.85	□□□□□ -1.63
DIP2	YLR129W	TAN1	P53072	289 aa	Predicted RBP	4.85	□□□□□ -1.63
DIP2	YLR129W	KIP3	P53086	805 aa	Known RBP	4.85	□□□□□ -1.63
DIP2	YLR129W	RVB2	Q12464	471 aa	Known RBP	4.85	□□□□□ -1.63
DIP2	YLR129W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.84	□□□□□ -1.63
DIP2	YLR129W	PEA2	P40091	420 aa		4.84	□□□□□ -1.63
DIP2	YLR129W	YSP2	Q06681	1438 aa		4.84	□□□□□ -1.63
DIP2	YLR129W	USO1	P25386	1790 aa		4.84	□□□□□ -1.63
DIP2	YLR129W	RPA135	P22138	1203 aa	Known RBP	4.84	□□□□□ -1.63
DIP2	YLR129W	HOS4	P40480	1083 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms