RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A TY1A-ORP0CX59 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-PR2P0CX60 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-DR5P0CX65 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-ER2P0CX66 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-GR3P0CX67 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-LR1P0CX68 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-MR2P0CX69 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-JR2P47099 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A YNR021WP53723 404 aaKnown RBP7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-DR1Q03856 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-ML1Q04706 440 aaKnown RBP7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-BRQ12217 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-NL2Q12470 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A TY1A-GR2Q12485 440 aa7.3□□□□□ -1.24
YGR109W-AYGR109W-A KEX2P13134 814 aa7.28□□□□□ -1.24
YGR109W-AYGR109W-A SEC2P17065 759 aa7.28□□□□□ -1.24
YGR109W-AYGR109W-A ERF2Q06551 359 aa7.28□□□□□ -1.24
YGR109W-AYGR109W-A SDH2P21801 266 aa7.27□□□□□ -1.25
YGR109W-AYGR109W-A GLC3P32775 704 aa7.27□□□□□ -1.25
YGR109W-AYGR109W-A ATF2P53296 535 aa7.26□□□□□ -1.25
YGR109W-AYGR109W-A LEU3P08638 886 aa7.25□□□□□ -1.25
YGR109W-AYGR109W-A NIS1P53939 407 aa7.25□□□□□ -1.25
YGR109W-AYGR109W-A RAS1P01119 309 aa7.23□□□□□ -1.25
YGR109W-AYGR109W-A SIT4P20604 311 aa7.23□□□□□ -1.25
YGR109W-AYGR109W-A MRF1P30775 413 aaPredicted RBP7.23□□□□□ -1.25
YGR109W-AYGR109W-A AMS1P22855 1083 aa7.21□□□□□ -1.26
YGR109W-AYGR109W-A SPT16P32558 1035 aaKnown RBP7.21□□□□□ -1.26
YGR109W-AYGR109W-A RRN7P40992 514 aa7.21□□□□□ -1.26
YGR109W-AYGR109W-A RTF1P53064 558 aa7.21□□□□□ -1.26
YGR109W-AYGR109W-A YNL115CP53925 644 aa7.21□□□□□ -1.26
YGR109W-AYGR109W-A FPK1P53739 893 aa7.2□□□□□ -1.26
YGR109W-AYGR109W-A AIM7Q12156 149 aa7.19□□□□□ -1.26
YGR109W-AYGR109W-A YMR196WQ04336 1088 aa7.18□□□□□ -1.26
YGR109W-AYGR109W-A YEL077CQ3E7X8 1277 aa7.18□□□□□ -1.26
YGR109W-AYGR109W-A ERG12P07277 443 aa7.17□□□□□ -1.26
YGR109W-AYGR109W-A PAT1P25644 796 aaKnown RBP7.17□□□□□ -1.26
YGR109W-AYGR109W-A TUB4P53378 473 aa7.16□□□□□ -1.26
YGR109W-AYGR109W-A AGE1Q04412 482 aa7.16□□□□□ -1.26
YGR109W-AYGR109W-A SCJ1P25303 377 aa7.14□□□□□ -1.27
YGR109W-AYGR109W-A PAC1P39946 494 aaKnown RBP7.14□□□□□ -1.27
YGR109W-AYGR109W-A HST2P53686 357 aa7.14□□□□□ -1.27
YGR109W-AYGR109W-A SLY41P22215 453 aa7.13□□□□□ -1.27
YGR109W-AYGR109W-A CST6P40535 587 aa7.13□□□□□ -1.27
YGR109W-AYGR109W-A RPN1P38764 993 aaKnown RBP7.12□□□□□ -1.27
YGR109W-AYGR109W-A MMP1Q12372 583 aa7.12□□□□□ -1.27
YGR109W-AYGR109W-A GLN1P32288 370 aaKnown RBP7.1□□□□□ -1.27
YGR109W-AYGR109W-A LAM6Q08001 693 aa7.1□□□□□ -1.27
YGR109W-AYGR109W-A TYW1Q08960 810 aaKnown RBP7.1□□□□□ -1.27
YGR109W-AYGR109W-A KIN1P13185 1064 aa7.09□□□□□ -1.27
YGR109W-AYGR109W-A FRK1Q03002 865 aaPredicted RBP7.09□□□□□ -1.27
YGR109W-AYGR109W-A ESS1P22696 170 aa7.08□□□□□ -1.28
YGR109W-AYGR109W-A BDP1P46678 594 aa7.08□□□□□ -1.28
YGR109W-AYGR109W-A MOD5P07884 428 aa7.07□□□□□ -1.28
YGR109W-AYGR109W-A KTR1P27810 393 aaKnown RBP7.07□□□□□ -1.28
YGR109W-AYGR109W-A CSN12P47130 423 aa7.06□□□□□ -1.28
YGR109W-AYGR109W-A PUS6P53294 404 aa7.06□□□□□ -1.28
YGR109W-AYGR109W-A YPL062WQ02781 134 aa7.05□□□□□ -1.28
YGR109W-AYGR109W-A TRM1P15565 570 aaKnown RBP7.04□□□□□ -1.28
YGR109W-AYGR109W-A YJU3P28321 313 aa7.04□□□□□ -1.28
YGR109W-AYGR109W-A KXD1P53158 218 aa7.04□□□□□ -1.28
YGR109W-AYGR109W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
YGR109W-AYGR109W-A CLA4P48562 842 aa7.03□□□□□ -1.28
YGR109W-AYGR109W-A TBF1Q02457 562 aa7.03□□□□□ -1.28
YGR109W-AYGR109W-A YDL206WQ12424 762 aa7.02□□□□□ -1.29
YGR109W-AYGR109W-A PDC1P06169 563 aaKnown RBP7.01□□□□□ -1.29
YGR109W-AYGR109W-A PKH3Q03306 898 aaPredicted RBP7.01□□□□□ -1.29
YGR109W-AYGR109W-A TRK1P12685 1235 aa7□□□□□ -1.29
YGR109W-AYGR109W-A AIR1P40507 360 aaKnown RBP7□□□□□ -1.29
YGR109W-AYGR109W-A HXT10P43581 546 aa7□□□□□ -1.29
YGR109W-AYGR109W-A RPA14P50106 137 aa7□□□□□ -1.29
YGR109W-AYGR109W-A PUS5Q06244 254 aa7□□□□□ -1.29
YGR109W-AYGR109W-A TPD3P31383 635 aa6.99□□□□□ -1.29
YGR109W-AYGR109W-A RSC30P38781 883 aa6.99□□□□□ -1.29
YGR109W-AYGR109W-A YPR097WQ06839 1073 aa6.99□□□□□ -1.29
YGR109W-AYGR109W-A HED1Q03937 162 aa6.98□□□□□ -1.29
YGR109W-AYGR109W-A ALR1Q08269 859 aa6.98□□□□□ -1.29
YGR109W-AYGR109W-A GUA1P38625 525 aaKnown RBP6.97□□□□□ -1.29
YGR109W-AYGR109W-A RRD1P40454 393 aaKnown RBP6.97□□□□□ -1.29
YGR109W-AYGR109W-A ARG8P18544 423 aa6.96□□□□□ -1.3
YGR109W-AYGR109W-A SSA2P10592 639 aaKnown RBP6.95□□□□□ -1.3
YGR109W-AYGR109W-A CDC4P07834 779 aa6.94□□□□□ -1.3
YGR109W-AYGR109W-A RAD59Q12223 238 aa6.94□□□□□ -1.3
YGR109W-AYGR109W-A SYH1Q02875 849 aaKnown RBP6.9□□□□□ -1.3
YGR109W-AYGR109W-A MET32Q12041 191 aa6.9□□□□□ -1.3
YGR109W-AYGR109W-A HPC2Q01448 625 aa6.88□□□□□ -1.31
YGR109W-AYGR109W-A KIP2P28743 706 aa6.87□□□□□ -1.31
YGR109W-AYGR109W-A IXR1P33417 597 aa6.86□□□□□ -1.31
YGR109W-AYGR109W-A ASH1P34233 588 aa6.86□□□□□ -1.31
YGR109W-AYGR109W-A LEO1P38439 464 aa6.86□□□□□ -1.31
YGR109W-AYGR109W-A VAC17P25591 423 aa6.85□□□□□ -1.31
YGR109W-AYGR109W-A BRE2P43132 505 aa6.85□□□□□ -1.31
YGR109W-AYGR109W-A AFT1P22149 690 aa6.84□□□□□ -1.31
YGR109W-AYGR109W-A TFB3Q03290 321 aa6.83□□□□□ -1.32
YGR109W-AYGR109W-A MAK16P10962 306 aaPredicted RBP6.82□□□□□ -1.32
YGR109W-AYGR109W-A BRL1P38770 471 aa6.82□□□□□ -1.32
YGR109W-AYGR109W-A FIG4P42837 879 aa6.82□□□□□ -1.32
YGR109W-AYGR109W-A HST3P53687 447 aa6.82□□□□□ -1.32
YGR109W-AYGR109W-A GCR2Q01722 534 aa6.82□□□□□ -1.32
YGR109W-AYGR109W-A ITT1Q04638 464 aa6.8□□□□□ -1.32
YGR109W-AYGR109W-A PKC1P24583 1151 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms