RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeastyeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDR1YGR100W COG8Q04632 607 aa5.39□□□□□ -1.55
MDR1YGR100W HIF1Q12373 385 aa5.39□□□□□ -1.55
MDR1YGR100W MCM2P29469 868 aa5.38□□□□□ -1.55
MDR1YGR100W CIN4P39110 191 aa5.38□□□□□ -1.55
MDR1YGR100W UBP10P53874 792 aaPredicted RBP5.38□□□□□ -1.55
MDR1YGR100W SUB1P54000 292 aaKnown RBP5.38□□□□□ -1.55
MDR1YGR100W VPS60Q03390 229 aa5.38□□□□□ -1.55
MDR1YGR100W KOG1P38873 1557 aa5.38□□□□□ -1.55
MDR1YGR100W TY1B-DR4Q07793 1604 aa5.38□□□□□ -1.55
MDR1YGR100W ESC2Q06340 456 aa5.38□□□□□ -1.55
MDR1YGR100W GCN2P15442 1659 aa5.38□□□□□ -1.55
MDR1YGR100W GEA1P47102 1408 aaPredicted RBP5.38□□□□□ -1.55
MDR1YGR100W APL6P46682 809 aa5.37□□□□□ -1.55
MDR1YGR100W ITC1P53125 1264 aa5.37□□□□□ -1.55
MDR1YGR100W HOS3Q02959 697 aaKnown RBP5.37□□□□□ -1.55
MDR1YGR100W LCD1Q04377 747 aa5.37□□□□□ -1.55
MDR1YGR100W SWR1Q05471 1514 aa5.37□□□□□ -1.55
MDR1YGR100W SNQ2P32568 1501 aaKnown RBP5.36□□□□□ -1.55
MDR1YGR100W TCD1P38756 429 aa5.36□□□□□ -1.55
MDR1YGR100W SLP1Q12232 587 aa5.36□□□□□ -1.55
MDR1YGR100W PHO87P25360 923 aa5.35□□□□□ -1.55
MDR1YGR100W YGL140CP53120 1219 aa5.35□□□□□ -1.55
MDR1YGR100W RNT1Q02555 471 aa5.35□□□□□ -1.55
MDR1YGR100W NUP159P40477 1460 aa5.35□□□□□ -1.55
MDR1YGR100W SPT5P27692 1063 aaKnown RBP5.35□□□□□ -1.55
MDR1YGR100W RPC82P32349 654 aa5.35□□□□□ -1.55
MDR1YGR100W YMR102CQ03177 834 aa5.35□□□□□ -1.55
MDR1YGR100W YLL054CQ12244 843 aa5.35□□□□□ -1.55
MDR1YGR100W GDT1P38301 280 aaPredicted RBP5.34□□□□□ -1.55
MDR1YGR100W SIT1P39980 628 aa5.34□□□□□ -1.55
MDR1YGR100W LSP1Q12230 341 aaKnown RBP5.34□□□□□ -1.55
MDR1YGR100W SFI1Q12369 946 aa5.34□□□□□ -1.55
MDR1YGR100W SRP54P20424 541 aaKnown RBP5.34□□□□□ -1.55
MDR1YGR100W SWH1P35845 1188 aa5.34□□□□□ -1.55
MDR1YGR100W YMR1P47147 688 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
MDR1YGR100W APL5Q08951 932 aaKnown RBP5.34□□□□□ -1.55
MDR1YGR100W ESP1Q03018 1630 aa5.34□□□□□ -1.55
MDR1YGR100W YGL081WP53156 320 aa5.34□□□□□ -1.56
MDR1YGR100W RKM3P38222 552 aa5.33□□□□□ -1.56
MDR1YGR100W ERV41Q04651 352 aa5.33□□□□□ -1.56
MDR1YGR100W NUP157P40064 1391 aaKnown RBP5.33□□□□□ -1.56
MDR1YGR100W ARP5P53946 755 aa5.33□□□□□ -1.56
MDR1YGR100W ALD3P54114 506 aa5.33□□□□□ -1.56
MDR1YGR100W YDL144CQ07589 356 aa5.33□□□□□ -1.56
MDR1YGR100W PDR15Q04182 1529 aaKnown RBP5.32□□□□□ -1.56
MDR1YGR100W SUI2P20459 304 aaKnown RBP5.32□□□□□ -1.56
MDR1YGR100W PEA2P40091 420 aa5.32□□□□□ -1.56
MDR1YGR100W AIM20P40451 204 aa5.32□□□□□ -1.56
MDR1YGR100W PDR5P33302 1511 aaKnown RBP5.32□□□□□ -1.56
MDR1YGR100W MAK11P20484 414 aaKnown RBP5.32□□□□□ -1.56
MDR1YGR100W NOP7P53261 605 aaKnown RBP5.32□□□□□ -1.56
MDR1YGR100W RRP15Q06511 250 aaPredicted RBP5.32□□□□□ -1.56
MDR1YGR100W NFI1Q12216 726 aa5.32□□□□□ -1.56
MDR1YGR100W MFT1P33441 392 aaKnown RBP5.31□□□□□ -1.56
MDR1YGR100W RPP0P05317 312 aaKnown RBP5.31□□□□□ -1.56
MDR1YGR100W LAM1P38851 1228 aa5.31□□□□□ -1.56
MDR1YGR100W HOT1Q03213 719 aa5.31□□□□□ -1.56
MDR1YGR100W GIN4Q12263 1142 aa5.31□□□□□ -1.56
MDR1YGR100W YOL087CQ99247 1116 aa5.31□□□□□ -1.56
MDR1YGR100W DNF1P32660 1571 aa5.31□□□□□ -1.56
MDR1YGR100W SPT16P32558 1035 aaKnown RBP5.3□□□□□ -1.56
MDR1YGR100W MIC60P36112 540 aa5.3□□□□□ -1.56
MDR1YGR100W YNL035CP53962 389 aaKnown RBP5.3□□□□□ -1.56
MDR1YGR100W VPS72Q03388 795 aa5.3□□□□□ -1.56
MDR1YGR100W CHZ1P40019 153 aaPredicted RBP5.3□□□□□ -1.56
MDR1YGR100W SML1Q04964 104 aa5.3□□□□□ -1.56
MDR1YGR100W MDM38Q08179 573 aa5.3□□□□□ -1.56
MDR1YGR100W PUS1Q12211 544 aaKnown RBP5.3□□□□□ -1.56
MDR1YGR100W VPS15P22219 1454 aa5.3□□□□□ -1.56
MDR1YGR100W SWI3P32591 825 aa5.3□□□□□ -1.56
MDR1YGR100W GEA2P39993 1459 aaKnown RBP5.29□□□□□ -1.56
MDR1YGR100W YOR1P53049 1477 aa5.29□□□□□ -1.56
MDR1YGR100W ISW1P38144 1129 aa5.29□□□□□ -1.56
MDR1YGR100W RKR1Q04781 1562 aa5.29□□□□□ -1.56
MDR1YGR100W DAL5P15365 543 aa5.29□□□□□ -1.56
MDR1YGR100W RTT107P38850 1070 aa5.29□□□□□ -1.56
MDR1YGR100W MRS2Q01926 470 aa5.29□□□□□ -1.56
MDR1YGR100W RAD9P14737 1309 aa5.28□□□□□ -1.56
MDR1YGR100W SRS2P12954 1174 aa5.28□□□□□ -1.56
MDR1YGR100W DNM1P54861 757 aa5.28□□□□□ -1.56
MDR1YGR100W PEX19Q07418 342 aa5.28□□□□□ -1.56
MDR1YGR100W PSR1Q07800 427 aa5.28□□□□□ -1.56
MDR1YGR100W ZUO1P32527 433 aaKnown RBP5.28□□□□□ -1.56
MDR1YGR100W NUF2P33895 451 aa5.28□□□□□ -1.56
MDR1YGR100W MNR2P35724 969 aa5.28□□□□□ -1.56
MDR1YGR100W HAP5Q02516 242 aa5.28□□□□□ -1.56
MDR1YGR100W CYC8P14922 966 aa5.27□□□□□ -1.57
MDR1YGR100W DPH5P32469 300 aaPredicted RBP5.27□□□□□ -1.57
MDR1YGR100W TPS3P38426 1054 aaKnown RBP5.27□□□□□ -1.57
MDR1YGR100W VID30P53076 958 aa5.27□□□□□ -1.57
MDR1YGR100W ORM2Q06144 216 aa5.27□□□□□ -1.57
MDR1YGR100W TLG2Q08144 397 aa5.27□□□□□ -1.57
MDR1YGR100W PIM1P36775 1133 aa5.27□□□□□ -1.57
MDR1YGR100W OLA1P38219 394 aaKnown RBP5.27□□□□□ -1.57
MDR1YGR100W VPS41P38959 992 aa5.27□□□□□ -1.57
MDR1YGR100W VPS5Q92331 675 aa5.27□□□□□ -1.57
MDR1YGR100W TY3B-GQ99315 1547 aa5.27□□□□□ -1.57
MDR1YGR100W STU2P46675 888 aa5.26□□□□□ -1.57
MDR1YGR100W TIM11P81449 96 aaPredicted RBP5.26□□□□□ -1.57
MDR1YGR100W TIM50Q02776 476 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms