RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C SRB8P25648 1427 aa8.1□□□□□ -1.11
RPT6YGL048C MAK10Q02197 733 aa8.08□□□□□ -1.12
RPT6YGL048C MST1P07236 462 aa8.06□□□□□ -1.12
RPT6YGL048C URN1Q06525 465 aaKnown RBP8.06□□□□□ -1.12
RPT6YGL048C IPL1P38991 367 aa8.03□□□□□ -1.12
RPT6YGL048C UBP9P39967 754 aa8.03□□□□□ -1.12
RPT6YGL048C BUD21Q08492 214 aaPredicted RBP8.02□□□□□ -1.13
RPT6YGL048C YMR1P47147 688 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
RPT6YGL048C TYS1P36421 394 aaKnown RBP7.99□□□□□ -1.13
RPT6YGL048C HAP1P0CE41 1502 aa7.98□□□□□ -1.13
RPT6YGL048C VPS29P38759 282 aa7.98□□□□□ -1.13
RPT6YGL048C BUD31P25337 157 aaPredicted RBP7.96□□□□□ -1.14
RPT6YGL048C RCR1P38212 213 aa7.95□□□□□ -1.14
RPT6YGL048C IKI3Q06706 1349 aaKnown RBP7.95□□□□□ -1.14
RPT6YGL048C GTT3P39996 337 aa7.94□□□□□ -1.14
RPT6YGL048C NUP188P52593 1655 aaKnown RBP7.93□□□□□ -1.14
RPT6YGL048C DBP1P24784 617 aaKnown RBP7.93□□□□□ -1.14
RPT6YGL048C VMR1P38735 1592 aa7.93□□□□□ -1.14
RPT6YGL048C SSM4P40318 1319 aa7.91□□□□□ -1.14
RPT6YGL048C IML1P47170 1584 aa7.91□□□□□ -1.14
RPT6YGL048C PDR5P33302 1511 aaKnown RBP7.89□□□□□ -1.15
RPT6YGL048C RAM2P29703 316 aa7.89□□□□□ -1.15
RPT6YGL048C STS1P38637 319 aa7.89□□□□□ -1.15
RPT6YGL048C YMR196WQ04336 1088 aa7.89□□□□□ -1.15
RPT6YGL048C PIB1Q06651 286 aa7.89□□□□□ -1.15
RPT6YGL048C MAK11P20484 414 aaKnown RBP7.88□□□□□ -1.15
RPT6YGL048C THI12P42883 340 aa7.88□□□□□ -1.15
RPT6YGL048C THI5P43534 340 aa7.88□□□□□ -1.15
RPT6YGL048C THI11P47183 340 aa7.88□□□□□ -1.15
RPT6YGL048C THI13Q07748 340 aa7.88□□□□□ -1.15
RPT6YGL048C PDR11P40550 1411 aa7.86□□□□□ -1.15
RPT6YGL048C USO1P25386 1790 aa7.84□□□□□ -1.15
RPT6YGL048C YBL029C-AQ3E756 94 aa7.82□□□□□ -1.16
RPT6YGL048C TY1B-NL2Q99337 1749 aaKnown RBP7.82□□□□□ -1.16
RPT6YGL048C VMA1P17255 1071 aaKnown RBP7.81□□□□□ -1.16
RPT6YGL048C VNX1P42839 908 aa7.79□□□□□ -1.16
RPT6YGL048C WSC3Q12215 556 aa7.79□□□□□ -1.16
RPT6YGL048C MSB4Q12317 492 aa7.79□□□□□ -1.16
RPT6YGL048C SAM3Q08986 587 aa7.77□□□□□ -1.17
RPT6YGL048C CFT1Q06632 1357 aaKnown RBP7.76□□□□□ -1.17
RPT6YGL048C DMA1P38823 416 aa7.76□□□□□ -1.17
RPT6YGL048C SPP1Q03012 353 aa7.75□□□□□ -1.17
RPT6YGL048C KRE5P22023 1365 aa7.74□□□□□ -1.17
RPT6YGL048C COQ8P27697 501 aa7.74□□□□□ -1.17
RPT6YGL048C EAP1P36041 632 aaKnown RBP7.74□□□□□ -1.17
RPT6YGL048C NOP53Q12080 455 aaKnown RBP7.74□□□□□ -1.17
RPT6YGL048C GCN2P15442 1659 aa7.73□□□□□ -1.17
RPT6YGL048C RAV1P47104 1357 aa7.72□□□□□ -1.17
RPT6YGL048C TIF11P38912 153 aaKnown RBP7.72□□□□□ -1.17
RPT6YGL048C RIA1P53893 1110 aa7.72□□□□□ -1.17
RPT6YGL048C YOL036WQ08206 761 aa7.72□□□□□ -1.17
RPT6YGL048C LEO1P38439 464 aa7.7□□□□□ -1.18
RPT6YGL048C SET4P42948 560 aa7.7□□□□□ -1.18
RPT6YGL048C YNR029CP53729 429 aaKnown RBP7.7□□□□□ -1.18
RPT6YGL048C GYP5Q12344 894 aa7.7□□□□□ -1.18
RPT6YGL048C BCK1Q01389 1478 aa7.69□□□□□ -1.18
RPT6YGL048C SET1P38827 1080 aaKnown RBP7.69□□□□□ -1.18
RPT6YGL048C MRX12P47084 519 aa7.69□□□□□ -1.18
RPT6YGL048C GRE2Q12068 342 aaKnown RBP7.68□□□□□ -1.18
RPT6YGL048C PTC3P34221 468 aaKnown RBP7.67□□□□□ -1.18
RPT6YGL048C ALD4P46367 519 aaKnown RBP7.67□□□□□ -1.18
RPT6YGL048C RTC1Q08281 1341 aa7.67□□□□□ -1.18
RPT6YGL048C SIS1P25294 352 aaKnown RBP7.66□□□□□ -1.18
RPT6YGL048C EDS1P38073 919 aa7.66□□□□□ -1.18
RPT6YGL048C ULI1P43604 169 aa7.66□□□□□ -1.18
RPT6YGL048C CAB1Q04430 367 aa7.66□□□□□ -1.18
RPT6YGL048C RAD9P14737 1309 aa7.66□□□□□ -1.18
RPT6YGL048C PAF1P38351 445 aa7.65□□□□□ -1.18
RPT6YGL048C ATH1P48016 1211 aa7.65□□□□□ -1.18
RPT6YGL048C APP1P53933 587 aa7.64□□□□□ -1.19
RPT6YGL048C HTA1P04911 132 aaKnown RBP7.63□□□□□ -1.19
RPT6YGL048C HTA2P04912 132 aa7.63□□□□□ -1.19
RPT6YGL048C GUT1P32190 709 aa7.63□□□□□ -1.19
RPT6YGL048C NUP192P47054 1683 aa7.62□□□□□ -1.19
RPT6YGL048C GLN1P32288 370 aaKnown RBP7.61□□□□□ -1.19
RPT6YGL048C TRP5P00931 707 aaKnown RBP7.59□□□□□ -1.19
RPT6YGL048C DCW1P36091 449 aa7.59□□□□□ -1.19
RPT6YGL048C IOC2Q12072 812 aa7.59□□□□□ -1.19
RPT6YGL048C TY3B-IQ7LHG5 1498 aaKnown RBP7.59□□□□□ -1.19
RPT6YGL048C LDB19Q12502 818 aa7.58□□□□□ -1.2
RPT6YGL048C JIP4Q03361 876 aa7.57□□□□□ -1.2
RPT6YGL048C NOP7P53261 605 aaKnown RBP7.56□□□□□ -1.2
RPT6YGL048C YNL035CP53962 389 aaKnown RBP7.54□□□□□ -1.2
RPT6YGL048C ENT1Q12518 454 aa7.54□□□□□ -1.2
RPT6YGL048C YEL023CP39992 682 aa7.53□□□□□ -1.2
RPT6YGL048C SEC61P32915 480 aa7.52□□□□□ -1.21
RPT6YGL048C PTC4P38089 393 aa7.52□□□□□ -1.21
RPT6YGL048C TAF8Q03750 510 aa7.52□□□□□ -1.21
RPT6YGL048C YPR148CQ06523 435 aa7.52□□□□□ -1.21
RPT6YGL048C ENV9Q08651 330 aa7.52□□□□□ -1.21
RPT6YGL048C CPS1P27614 576 aa7.51□□□□□ -1.21
RPT6YGL048C ESL2P36168 1195 aa7.51□□□□□ -1.21
RPT6YGL048C FKH1P40466 484 aa7.51□□□□□ -1.21
RPT6YGL048C TFG1P41895 735 aaPredicted RBP7.51□□□□□ -1.21
RPT6YGL048C RTG1P32607 177 aa7.5□□□□□ -1.21
RPT6YGL048C TAF5P38129 798 aa7.49□□□□□ -1.21
RPT6YGL048C RCM1P53972 490 aa7.49□□□□□ -1.21
RPT6YGL048C PPH3P32345 308 aa7.48□□□□□ -1.21
RPT6YGL048C YMR074CQ04773 145 aa7.48□□□□□ -1.21
RPT6YGL048C NCR1Q12200 1170 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms