RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W YPL062WQ02781 134 aa6.11□□□□□ -1.43
UBP6YFR010W URN1Q06525 465 aaKnown RBP6.11□□□□□ -1.43
UBP6YFR010W BUD20Q08004 166 aaPredicted RBP6.1□□□□□ -1.43
UBP6YFR010W PRT1P06103 763 aaKnown RBP6.09□□□□□ -1.44
UBP6YFR010W CLB5P30283 435 aa6.09□□□□□ -1.44
UBP6YFR010W AIM44Q99299 758 aa6.09□□□□□ -1.44
UBP6YFR010W NPL4P33755 580 aa6.08□□□□□ -1.44
UBP6YFR010W TY1A-DR4O74302 440 aa6.06□□□□□ -1.44
UBP6YFR010W ERG12P07277 443 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-HP0C2I4 478 aaKnown RBP6.06□□□□□ -1.44
UBP6YFR010W TY1A-AP0CX57 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-PR1P0CX58 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-ORP0CX59 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-PR2P0CX60 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-DR5P0CX65 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-ER2P0CX66 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-GR3P0CX67 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-LR1P0CX68 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-MR2P0CX69 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-JR2P47099 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-DR1Q03856 440 aa6.06□□□□□ -1.44
UBP6YFR010W IOC4Q04213 475 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-ML1Q04706 440 aaKnown RBP6.06□□□□□ -1.44
UBP6YFR010W TY1A-BRQ12217 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-NL2Q12470 440 aa6.06□□□□□ -1.44
UBP6YFR010W TY1A-GR2Q12485 440 aa6.06□□□□□ -1.44
UBP6YFR010W GBP2P25555 427 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
UBP6YFR010W GAR1P28007 205 aaKnown RBP6.04□□□□□ -1.44
UBP6YFR010W BRE2P43132 505 aa6.04□□□□□ -1.44
UBP6YFR010W TEA1P47988 759 aa6.04□□□□□ -1.44
UBP6YFR010W SEC2P17065 759 aa6.04□□□□□ -1.44
UBP6YFR010W YNR021WP53723 404 aaKnown RBP6.04□□□□□ -1.44
UBP6YFR010W KEX2P13134 814 aa6.03□□□□□ -1.44
UBP6YFR010W GCD11P32481 527 aaKnown RBP6.03□□□□□ -1.44
UBP6YFR010W GLC3P32775 704 aa6.03□□□□□ -1.44
UBP6YFR010W AIR1P40507 360 aaKnown RBP6.03□□□□□ -1.44
UBP6YFR010W GCR2Q01722 534 aa6.03□□□□□ -1.44
UBP6YFR010W ERF2Q06551 359 aa6.02□□□□□ -1.45
UBP6YFR010W NIS1P53939 407 aa6.01□□□□□ -1.45
UBP6YFR010W DMA2P53924 522 aa6□□□□□ -1.45
UBP6YFR010W CST6P40535 587 aa5.99□□□□□ -1.45
UBP6YFR010W CLA4P48562 842 aa5.99□□□□□ -1.45
UBP6YFR010W SIT4P20604 311 aa5.99□□□□□ -1.45
UBP6YFR010W ATF2P53296 535 aa5.99□□□□□ -1.45
UBP6YFR010W RPN1P38764 993 aaKnown RBP5.98□□□□□ -1.45
UBP6YFR010W RRN7P40992 514 aa5.98□□□□□ -1.45
UBP6YFR010W SPT16P32558 1035 aaKnown RBP5.97□□□□□ -1.45
UBP6YFR010W RTF1P53064 558 aa5.97□□□□□ -1.45
UBP6YFR010W FPK1P53739 893 aa5.96□□□□□ -1.46
UBP6YFR010W YNL115CP53925 644 aa5.95□□□□□ -1.46
UBP6YFR010W YMR196WQ04336 1088 aa5.95□□□□□ -1.46
UBP6YFR010W AGE1Q04412 482 aa5.95□□□□□ -1.46
UBP6YFR010W AIM7Q12156 149 aa5.95□□□□□ -1.46
UBP6YFR010W FRK1Q03002 865 aaPredicted RBP5.94□□□□□ -1.46
UBP6YFR010W PAC1P39946 494 aaKnown RBP5.94□□□□□ -1.46
UBP6YFR010W ORC1P54784 914 aaPredicted RBP5.94□□□□□ -1.46
UBP6YFR010W LAM6Q08001 693 aa5.94□□□□□ -1.46
UBP6YFR010W TUB4P53378 473 aa5.93□□□□□ -1.46
UBP6YFR010W RLF2Q12495 606 aa5.93□□□□□ -1.46
UBP6YFR010W PAT1P25644 796 aaKnown RBP5.92□□□□□ -1.46
UBP6YFR010W HST2P53686 357 aa5.91□□□□□ -1.46
UBP6YFR010W CDC4P07834 779 aa5.9□□□□□ -1.46
UBP6YFR010W SLY41P22215 453 aa5.9□□□□□ -1.46
UBP6YFR010W SCJ1P25303 377 aa5.89□□□□□ -1.47
UBP6YFR010W MET22P32179 357 aa5.88□□□□□ -1.47
UBP6YFR010W BDP1P46678 594 aa5.88□□□□□ -1.47
UBP6YFR010W GLN1P32288 370 aaKnown RBP5.87□□□□□ -1.47
UBP6YFR010W MMP1Q12372 583 aa5.87□□□□□ -1.47
UBP6YFR010W MOD5P07884 428 aa5.86□□□□□ -1.47
UBP6YFR010W TYW1Q08960 810 aaKnown RBP5.86□□□□□ -1.47
UBP6YFR010W KIN1P13185 1064 aa5.85□□□□□ -1.47
UBP6YFR010W ESS1P22696 170 aa5.85□□□□□ -1.47
UBP6YFR010W KTR1P27810 393 aaKnown RBP5.85□□□□□ -1.47
UBP6YFR010W ENV9Q08651 330 aa5.84□□□□□ -1.47
UBP6YFR010W TRM1P15565 570 aaKnown RBP5.84□□□□□ -1.48
UBP6YFR010W TBF1Q02457 562 aa5.84□□□□□ -1.48
UBP6YFR010W YJU3P28321 313 aa5.83□□□□□ -1.48
UBP6YFR010W YRB30P53107 440 aaPredicted RBP5.83□□□□□ -1.48
UBP6YFR010W PUS6P53294 404 aa5.83□□□□□ -1.48
UBP6YFR010W HED1Q03937 162 aa5.83□□□□□ -1.48
UBP6YFR010W YDL206WQ12424 762 aa5.83□□□□□ -1.48
UBP6YFR010W CSN12P47130 423 aa5.82□□□□□ -1.48
UBP6YFR010W YDR444WQ04093 687 aa5.82□□□□□ -1.48
UBP6YFR010W PDC1P06169 563 aaKnown RBP5.81□□□□□ -1.48
UBP6YFR010W KXD1P53158 218 aa5.81□□□□□ -1.48
UBP6YFR010W RRD1P40454 393 aaKnown RBP5.8□□□□□ -1.48
UBP6YFR010W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
UBP6YFR010W PKH3Q03306 898 aaPredicted RBP5.8□□□□□ -1.48
UBP6YFR010W TPD3P31383 635 aa5.79□□□□□ -1.48
UBP6YFR010W HXT10P43581 546 aa5.79□□□□□ -1.48
UBP6YFR010W RPA14P50106 137 aa5.79□□□□□ -1.48
UBP6YFR010W PUS5Q06244 254 aa5.79□□□□□ -1.48
UBP6YFR010W ALR1Q08269 859 aa5.79□□□□□ -1.48
UBP6YFR010W YPR097WQ06839 1073 aa5.78□□□□□ -1.48
UBP6YFR010W ASH1P34233 588 aa5.77□□□□□ -1.49
UBP6YFR010W RSC30P38781 883 aa5.77□□□□□ -1.49
UBP6YFR010W TOP1P04786 769 aa5.76□□□□□ -1.49
UBP6YFR010W SSA2P10592 639 aaKnown RBP5.76□□□□□ -1.49
UBP6YFR010W HGH1P48362 394 aaKnown RBP5.76□□□□□ -1.49
UBP6YFR010W ARG8P18544 423 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms